Ghent University Academic Bibliography

Peptide-level robust ridge regression improves estimation, sensitivity, and specificity in data-dependent quantitative label-free shotgun proteomics

Ludger Goeminne, Kris Gevaert (UGent) and Lieven Clement (UGent)

(2016) MOLECULAR & CELLULAR PROTEOMICS. 15(2). p.657-668

Phosphoproteomics to characterize host response during influenza A virus infection of human macrophages

Sandra Söderholm, Denis E Kainov, Tiina Öhman, Oxana V Denisova, Bert Schepens (UGent) , Evgeny Kulesskiy, Susumu Y Imanishi, Garry Corthals, Petteri Hintsanen, Tero Aittokallio, et al.

(2016) MOLECULAR & CELLULAR PROTEOMICS. 15(10). p.3203-3219

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The salivary protein repertoire of the polyphagous spider mite Tetranychus urticae: a quest for effectors

Wim Jonckheere (UGent) , Wannes Dermauw (UGent) , Vladimir Zhurov, Nicky Wybouw (UGent) , Jan Van den Bulcke (UGent) , Carlos A Villarroel, Robert Greenhalgh, Mike Grbić, Rob C Schuurink, Luc Tirry (UGent) , et al.

(2016) MOLECULAR & CELLULAR PROTEOMICS. 15(12). p.3594-3613

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Journal Article
A1
open access

A role for human N-alpha acetyltransferase 30 (Naa30) in maintaining mitochondrial integrity

Petra Van Damme (UGent) , Thomas V Kalvik, Kristian W Starheim, Veronique Jonckheere (UGent) , Line M Myklebust, Gerben Menschaert (UGent) , Jan Erik Varhaug, Kris Gevaert (UGent) and Thomas Arnesen

(2016) MOLECULAR & CELLULAR PROTEOMICS. 15(11). p.3361-3372

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Proteome-scale binary interactomics in human cells

Sam Lievens (UGent) , José Van Der Heyden (UGent) , Delphine Masschaele (UGent) , Leentje De Ceuninck (UGent) , Ioanna Petta (UGent) , Surya Gupta (UGent) , Veronic De Puysseleyr, Virginie Vauthier (UGent) , Irma Lemmens (UGent) , Dries De Clercq, et al.

(2016) MOLECULAR & CELLULAR PROTEOMICS. 15(12). p.3624-3639

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Journal Article
A1
open access

DYn-2 based identification of Arabidopsis sulfenomes

Mosammat Salma Akter (UGent) , Jingjing Huang (UGent) , Nandita Bodra (UGent) , Barbara De Smet, Khadija Wahni, Debbie Rombaut (UGent) , Jarne Pauwels (UGent) , Kris Gevaert (UGent) , Kate Carroll, Frank Van Breusegem (UGent) , et al.

(2015) MOLECULAR & CELLULAR PROTEOMICS. 14(5). p.1183-1200

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Journal Article
A1
open access

Protein methionine sulfoxide dynamics in Arabidopsis thaliana under oxidative stress

Silke Jacques (UGent) , Bart Ghesquière (UGent) , Pieter-Jan De Bock, Hans Demol (UGent) , Khadija Wahni, Patrick Willems (UGent) , Joris Messens, Frank Van Breusegem (UGent) and Kris Gevaert (UGent)

(2015) MOLECULAR & CELLULAR PROTEOMICS. 14(5). p.1217-1229

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Proteomic identification of cysteine cathepsin substrates shed from the surface of cancer cells

Barbara Sobotič, Matej Vizovišek, Robert Vidmar, Petra Van Damme (UGent) , Vasilena Gocheva, Johanna A Joyce, Kris Gevaert (UGent) , Vito Turk, Boris Turk and Marko Fonović

(2015) MOLECULAR & CELLULAR PROTEOMICS. 14(8). p.2213-2228

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C-terminomics screen for natural substrates of cytosolic carboxypeptidase 1 reveals processing of acidic protein C termini

Sebastian Tanco (UGent) , Olivia Tort, Hans Demol (UGent) , Francesc Xavier Aviles, Kris Gevaert (UGent) , Petra Van Damme (UGent) and Julia Lorenzo

(2015) MOLECULAR & CELLULAR PROTEOMICS. 14(1). p.177-190

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Journal Article
A1
open access

A Saccharomyces cerevisiae model reveals in vivo functional impairment of the Ogden syndrome N-Terminal Acetyltransferase NAA10 Ser37Pro Mutant

Petra Van Damme (UGent) , Svein I. Støve, Nina Glomnes, Kris Gevaert (UGent) and Thomas Arnesen

(2014) MOLECULAR & CELLULAR PROTEOMICS. p.2031-2041

Academic Bibliography

Peptide-level robust ridge regression improves estimation, sensitivity, and specificity in data-dependent quantitative label-free shotgun proteomics

Phosphoproteomics to characterize host response during influenza A virus infection of human macrophages

The salivary protein repertoire of the polyphagous spider mite Tetranychus urticae: a quest for effectors

A role for human N-alpha acetyltransferase 30 (Naa30) in maintaining mitochondrial integrity

Proteome-scale binary interactomics in human cells

DYn-2 based identification of Arabidopsis sulfenomes

Protein methionine sulfoxide dynamics in Arabidopsis thaliana under oxidative stress

Proteomic identification of cysteine cathepsin substrates shed from the surface of cancer cells

C-terminomics screen for natural substrates of cytosolic carboxypeptidase 1 reveals processing of acidic protein C termini

A Saccharomyces cerevisiae model reveals in vivo functional impairment of the Ogden syndrome N-Terminal Acetyltransferase NAA10 Ser37Pro Mutant

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