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Proximity-dependent protein biotinylation : methods and protocols
Petra Van Damme (UGent) -
Cross-species proximity-dependent protein biotinylation : a standardized approach for mapping proxeomes
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Unraveling N-terminal proteoform interactomes via multiplexed recombineering in Salmonella
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- Book Chapter
- open access
Characterization of the protein interactome of membrane-bound transcription factors using TurboID-based proximity labeling in planta
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Volatile apocarotenoids
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High-coverage immunopeptidomics using timsTOF mass spectrometers with thunder-DDA-PASEF boosted by MS2Rescore
(2025) Immunoproteomics : methods and protocols. In Methods in molecular biology (MIMB) 2980. p.115-155 -
BioID in bacteria : selection of a suitable biotin ligase for proxeome mapping
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ROS detection and quantification in plant–nematode interactions
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Biodiversity analysis of metaproteomics samples with Unipept : a comprehensive tutorial
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- Book Chapter
- open access
Bioinformatics pipeline for processing single-cell data
(2024) Mass spectrometry based single cell proteomics. In Methods in molecular biology (MIMB) 2817. p.221-239