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MINI-EX version 2 : cell-type-specific gene regulatory network inference using an integrative single-cell transcriptomics approach
(2026) Plant transcription factors : methods and protocols. In Methods in Molecular Biology 2985. p.159-191 -
- Book Chapter
- open access
Illuminating small proteins through HiBiT blotting
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Proteomics-based analysis of laser-capture micro-dissected, formalin-fixed paraffin-embedded tissue samples
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ROS detection and quantification in plant–nematode interactions
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Biodiversity analysis of metaproteomics samples with Unipept : a comprehensive tutorial
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Quantitative measurements of biochemical and molecular markers of oxidative stress signaling and responses
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Single cell RNA-sequencing in Arabidopsis root tissues
(2023) Plant gene regulatory networks : methods and protocols. In Methods in Molecular Biology 2698. p.41-56 -
- Book Chapter
- open access
Characterization of gene regulatory networks in plants using new methods and data types
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- Book Chapter
- open access
Prediction of transcription factor regulators and gene regulatory networks in tomato using binding site information
(2023) Plant gene regulatory networks : methods and protocols. In Methods in Molecular Biology 2698. p.323-349 -
Proteomics-based analysis and diagnosis of formalin-fixed paraffin-embedded amyloidosis samples