Ghent University Academic Bibliography

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Unipept 4.0 : functional analysis of metaproteome data

Robbert Gurdeep Singh (UGent) , Alessandro Tanca, Antonio Palomba, Felix Van der Jeugt (UGent) , Pieter Verschaffelt (UGent) , Sergio Uzzau, Lennart Martens (UGent) , Peter Dawyndt (UGent) and Bart Mesuere (UGent)

(2019) JOURNAL OF PROTEOME RESEARCH.

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High-confidence interactome for RNF41 built on multiple orthogonal assays

Delphine Masschaele (UGent) , Joris Wauman (UGent) , Giel Vandemoortele (UGent) , Delphine De Sutter (UGent) , Leentje De Ceuninck (UGent) , Sven Eyckerman (UGent) and Jan Tavernier (UGent)

(2018) JOURNAL OF PROTEOME RESEARCH. 17(4). p.1348-1360

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Identification of immune-responsive gene 1 (IRG1) as a target of A20

Emmy Van Quickelberghe (UGent) , Arne Martens (UGent) , Ludger Goeminne (UGent) , Lieven Clement (UGent) , Geert van Loo (UGent) and Kris Gevaert (UGent)

(2018) JOURNAL OF PROTEOME RESEARCH. 17(6). p.2182-2191

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Expanding the use of spectral libraries in proteomics

Eric W Deutsch, Yasset Perez-Riverol, Robert J Chalkley, Mathias Wilhelm, Stephen Tate, Timo Sachsenberg, Mathias Walzer, Lukas Käll, Bernard Delanghe, Sebastian Böcker, et al.

(2018) JOURNAL OF PROTEOME RESEARCH. 17(12). p.4051-4060

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journalArticle
open access

An update on the moFF Algorithm for label-free quantitative proteomics

Andrea Argentini (UGent) , An Staes (UGent) , Björn Andreas Grüning, Subina Mehta, Caleb Easterly, Timothy Griffin, Pratik Jagtap, Francis Impens (UGent) and Lennart Martens

(2018) Journal of Proteome Research.

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journalArticle
open access

Proteomic Response to Thaxtomin Phytotoxin Elicitor Cellobiose and to Deletion of Cellulose Utilization Regulator CebR in Streptomyces scabies

Sören Planckaert (UGent) , Samuel Jourdan, Isolde M. Francis, Benoit Deflandre, Sébastien Rigali and Bart Devreese (UGent)

(2018) Journal of Proteome Research. 17(11). p.3837-3852

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proBAMconvert : a conversion tool for proBAM/proBed

Volodimir Olexiouk (UGent) and Gerben Menschaert (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(7). p.2639-2644

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journalArticle
A1
open access

Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products

Kenneth Verheggen (UGent) , Pieter-Jan Volders (UGent) , Pieter Mestdagh (UGent) , Gerben Menschaert (UGent) , Petra Van Damme (UGent) , Kris Gevaert (UGent) , Lennart Martens (UGent) and Jo Vandesompele (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(7). p.2508-2515

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Expanding the interactome of TES by exploiting TES modules with different subcellular localizations

Stefano Sala (UGent) , Marleen Van Troys (UGent) , Sandrine Medves, Marie Catillon, Evy Timmerman (UGent) , An Staes (UGent) , Elisabeth Schaffner-Reckinger, Kris Gevaert (UGent) and Christophe Ampe (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(5). p.2054-2071

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journalArticle
A1
open access

Unbiased protein association study on the public human proteome reveals biological connections between co-occurring protein pairs

Surya Gupta (UGent) , Kenneth Verheggen (UGent) , Jan Tavernier (UGent) and Lennart Martens (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(6). p.2204-2212

Academic Bibliography

Unipept 4.0 : functional analysis of metaproteome data

High-confidence interactome for RNF41 built on multiple orthogonal assays

Identification of immune-responsive gene 1 (IRG1) as a target of A20

Expanding the use of spectral libraries in proteomics

An update on the moFF Algorithm for label-free quantitative proteomics

Proteomic Response to Thaxtomin Phytotoxin Elicitor Cellobiose and to Deletion of Cellulose Utilization Regulator CebR in Streptomyces scabies

proBAMconvert : a conversion tool for proBAM/proBed

Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products

Expanding the interactome of TES by exploiting TES modules with different subcellular localizations

Unbiased protein association study on the public human proteome reveals biological connections between co-occurring protein pairs

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