Academic Bibliography

Mark

High-confidence interactome for RNF41 built on multiple orthogonal assays

Delphine Masschaele (UGent) , Joris Wauman (UGent) , Giel Vandemoortele (UGent) , Delphine De Sutter (UGent) , Leentje De Ceuninck (UGent) , Sven Eyckerman (UGent) and Jan Tavernier (UGent)

(2018) JOURNAL OF PROTEOME RESEARCH. 17(4). p.1348-1360

Mark

Identification of immune-responsive gene 1 (IRG1) as a target of A20

Emmy Van Quickelberghe (UGent) , Arne Martens (UGent) , Ludger Goeminne (UGent) , Lieven Clement (UGent) , Geert van Loo (UGent) and Kris Gevaert (UGent)

(2018) JOURNAL OF PROTEOME RESEARCH. 17(6). p.2182-2191

Mark

journalArticle
A1
open access

Unbiased protein association study on the public human proteome reveals biological connections between co-occurring protein pairs

Surya Gupta (UGent) , Kenneth Verheggen (UGent) , Jan Tavernier (UGent) and Lennart Martens (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(6). p.2204-2212

Mark

Flagging false positives following untargeted LCMS characterization of histone PTM combinations

Sander Willems (UGent) , Maarten Dhaenens (UGent) , Elisabeth Govaert (UGent) , Laura De Clerck (UGent) , Paulien Meert (UGent) , Christophe Van Neste (UGent) , Filip Van Nieuwerburgh (UGent) and Dieter Deforce (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(2). p.655-664

Mark

journalArticle
A1
open access

Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products

Kenneth Verheggen (UGent) , Pieter-Jan Volders (UGent) , Pieter Mestdagh (UGent) , Gerben Menschaert (UGent) , Petra Van Damme (UGent) , Kris Gevaert (UGent) , Lennart Martens (UGent) and Jo Vandesompele (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(7). p.2508-2515

Mark

proBAMconvert : a conversion tool for proBAM/proBed

Volodimir Olexiouk (UGent) and Gerben Menschaert (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(7). p.2639-2644

Mark

Expanding the interactome of TES by exploiting TES modules with different subcellular localizations

Stefano Sala (UGent) , Marleen Van Troys (UGent) , Sandrine Medves, Marie Catillon, Evy Timmerman (UGent) , An Staes (UGent) , Elisabeth Schaffner-Reckinger, Kris Gevaert (UGent) and Christophe Ampe (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(5). p.2054-2071

Mark

Brachyspira hyodysenteriae infection regulates mucin glycosylation synthesis inducing an increased expression of core-2 O-glycans in porcine colon

Vignesh Venkatakrishnan, Macarena P Quintana-Hayashi, Maxime Mahu, Freddy Haesebrouck (UGent) , Frank Pasmans (UGent) and Sara K Lindén

(2017) JOURNAL OF PROTEOME RESEARCH. 16(4). p.1728-1742

Mark

misc

Proteomics Standards Initiative : fifteen years of progress and future work

Eric W Deutsch, Sandra Orchard, Pierre-Alain Binz, Wout Bittremieux, Martin Eisenacher, Henning Hermjakob, Shin Kawano, Henry Lam, Gerhard Mayer, Gerben Menschaert (UGent) , et al.

(2017) JOURNAL OF PROTEOME RESEARCH. 16(12). p.4288-4298

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A pipeline for differential proteomics in unsequenced species

Sule Yilmaz-Rumpf (UGent) , Bjorn Victor, Niels Hulstaert (UGent) , Elien Vandermarliere (UGent) , Harald Barsnes, Sven Degroeve (UGent) , Surya Gupta (UGent) , Adriaan Sticker (UGent) , Sarah Gabriël (UGent) , Pierre Dorny (UGent) , et al.

(2016) JOURNAL OF PROTEOME RESEARCH. 15(6). p.1963-1970

Academic Bibliography

High-confidence interactome for RNF41 built on multiple orthogonal assays

Identification of immune-responsive gene 1 (IRG1) as a target of A20

Unbiased protein association study on the public human proteome reveals biological connections between co-occurring protein pairs

Flagging false positives following untargeted LCMS characterization of histone PTM combinations

Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products

proBAMconvert : a conversion tool for proBAM/proBed

Expanding the interactome of TES by exploiting TES modules with different subcellular localizations

Brachyspira hyodysenteriae infection regulates mucin glycosylation synthesis inducing an increased expression of core-2 O-glycans in porcine colon

Proteomics Standards Initiative : fifteen years of progress and future work

A pipeline for differential proteomics in unsequenced species

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