Ghent University Academic Bibliography

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Legume-specific recruitment of rhizobia by hyphae of arbuscular mycorrhizal fungi

Jiadong He, Judith Van Dingenen (UGent) , Sofie Goormachtig (UGent) , Maryline Calonne-Salmon and Stéphane Declerck

(2025) ISME JOURNAL. 19(1).
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- Miscellaneous
- open access
A case for absolute gene expression estimates in microbiome studies using metatranscriptomics

Michiel Perneel (UGent) , Harriet Alexander, Pascal I Hablützel and Steven Maere (UGent)

(2025) ISME JOURNAL. 19(1).
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Fast track to environmentally adapted rhizobia for growing soybean at northern latitudes using citizen science

Sonia García Méndez (UGent) , Stien Mertens (UGent) , Arne Temmerman (UGent) , Helena Van den Eynde (UGent) , Margo Vermeersch, Lena Vlaminck (UGent) , Olivier Berteloot (UGent) , Judith Van Dingenen (UGent) , Alexander Clarysse (UGent) , Annick De Keyser (UGent) , et al.

(2025) ISME JOURNAL.
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Host-microbiota matching and epigenetic modulation drive Daphnia magna responses to cyanobacterial stress

Karen Bisschop (UGent) , Naina Goel, Manon Coone, Isabel Vanoverberghe, Anna Greffe, Jana Asselman (UGent) and Ellen Decaestecker

(2025) ISME JOURNAL. 19(1).
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Natural and lab-derived microbiomes differentially shape stressor interaction patterns of Daphnia magna

Shira Houwenhuyse (UGent) , Lore Bulteel, Isabel Vanoverberghe, Anna Krzynowek, Marlies Van de Maele, Manon Coone, Silke Van den Wyngaert, Arne Sinnesael, Robby Stoks and Ellen Decaestecker

(2025) ISME JOURNAL. 19(1).
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Weak selection for resistance to quorum sensing inhibition during multiple host infection cycles

Qian Yang (UGent) and Tom Defoirdt (UGent)

(2024) ISME JOURNAL. 18(1).
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Enzymatic machinery of wood-inhabiting fungi that degrade temperate tree species

Lydia Kipping, Nico Jehmlich, Julia Moll, Matthias Noll, Martin M Gossner, Tim Van Den Bossche (UGent) , Pascal Edelmann, Werner Borken, Martin Hofrichter and Harald Kellner

(2024) ISME JOURNAL. 18(1).
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Arbuscular mycorrhizal hyphae facilitate rhizobia dispersal and nodulation in legumes

Jiadong He, Lin Zhang (UGent) , Judith Van Dingenen (UGent) , Sandrien Desmet (UGent) , Sofie Goormachtig (UGent) , Maryline Calonne-Salmon and Stéphane Declerck

(2024) ISME JOURNAL. 18(1).
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Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communities

Pieter Candry, Grayson L. Chadwick, Jose Maria Caravajal-Arroyo, Tim Lacoere (UGent) , Mari-Karoliina Henriikka Winkler, Ramon Ganigué (UGent) , Victoria J. Orphan and Korneel Rabaey (UGent)

(2023) ISME JOURNAL. 17(11). p.2014-2022
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Functional conservation of microbial communities determines composition predictability in anaerobic digestion

Qiang Lin, Lingjuan Li, Jo De Vrieze (UGent) , Chaonan Li, Xiaoyu Fang and Xiangzhen Li

(2023) ISME JOURNAL. 17(11). p.1920-1930

Academic Bibliography

Legume-specific recruitment of rhizobia by hyphae of arbuscular mycorrhizal fungi

A case for absolute gene expression estimates in microbiome studies using metatranscriptomics

Fast track to environmentally adapted rhizobia for growing soybean at northern latitudes using citizen science

Host-microbiota matching and epigenetic modulation drive Daphnia magna responses to cyanobacterial stress

Natural and lab-derived microbiomes differentially shape stressor interaction patterns of Daphnia magna

Weak selection for resistance to quorum sensing inhibition during multiple host infection cycles

Enzymatic machinery of wood-inhabiting fungi that degrade temperate tree species

Arbuscular mycorrhizal hyphae facilitate rhizobia dispersal and nodulation in legumes

Trophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communities

Functional conservation of microbial communities determines composition predictability in anaerobic digestion

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