Ghent University Academic Bibliography

Show Sort by

Your filters: cql: parent exact "BMC BIOINFORMATICS"

Add to list
- Journal Article
- open access
Pan-genome de Bruijn graph using the bidirectional FM-index

Lore Depuydt (UGent) , Luca Renders (UGent) , Thomas Abeel (UGent) and Jan Fostier (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
Add to list
- Journal Article
- A1
- open access
VariantscanR : an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals

Fréderique Boeykens (UGent) , Sofie Bhatti (UGent) , Luc Peelman (UGent) and Bart Broeckx (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
Add to list
- Journal Article
- A1
- open access
CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins

Homin Park (UGent) , Jong Bum Won, Yunseol Park (UGent) , Esla Timothy Anzaku (UGent) , Joris Vankerschaver (UGent) , Arnout Van Messem (UGent) , Wesley De Neve (UGent) and Hyunjin Shim

(2023) BMC BIOINFORMATICS. 24(1).
Add to list
- Journal Article
- A1
- open access
DeltaMSI : artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data

Koen Swaerts, Franceska Dedeurwaerdere, Dieter De Smet, Peter De Jaeger and Geert Martens (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
Add to list
- Journal Article
- A1
- open access
FragGeneScanRs : faster gene prediction for short reads

Felix Van der Jeugt, Peter Dawyndt (UGent) and Bart Mesuere (UGent)

(2022) BMC BIOINFORMATICS. 23(1).
Add to list
- Journal Article
- A1
- open access
SUBATOMIC : a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks

Jens Uwe Loers (UGent) and Vanessa Vermeirssen (UGent)

(2022) BMC BIOINFORMATICS. 23(1).
Add to list
- Journal Article
- A1
- open access
DECONbench : a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification

Clémentine Decamps, Alexis Arnaud, Florent Petitprez, Mira Ayadi, Aurélia Baurès, Lucile Armenoult, N. Alcala, A. Arnaud, Francisco Avila Cobos (UGent) , Luciana Batista, et al.

(2021) BMC BIOINFORMATICS. 22(1).
Add to list
- Journal Article
- A1
- open access
Accurate determination of node and arc multiplicities in de bruijn graphs using conditional random fields

Aranka Steyaert (UGent) , P. Audenaert (UGent) and Jan Fostier (UGent)

(2020) BMC BIOINFORMATICS. 21(1).
Add to list
- Journal Article
- A1
- open access
High quality genome assemblies of Mycoplasma bovis using a taxon-specific Bonito basecaller for MinION and Flongle long-read nanopore sequencing

Nick Vereecke (UGent) , Jade Bokma (UGent) , Freddy Haesebrouck (UGent) , Hans Nauwynck (UGent) , Filip Boyen (UGent) , Bart Pardon (UGent) and Sebastiaan Theuns (UGent)

(2020) BMC BIOINFORMATICS. 21(1).
Add to list
- Journal Article
- A1
- open access
BLAMM : BLAS-based algorithm for finding position weight matrix occurrences in DNA sequences on CPUs and GPUs

Jan Fostier (UGent)

(2020) BMC BIOINFORMATICS. 21.

Academic Bibliography

Pan-genome de Bruijn graph using the bidirectional FM-index

VariantscanR : an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals

CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins

DeltaMSI : artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data

FragGeneScanRs : faster gene prediction for short reads

SUBATOMIC : a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks

DECONbench : a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification

Accurate determination of node and arc multiplicities in de bruijn graphs using conditional random fields

High quality genome assemblies of Mycoplasma bovis using a taxon-specific Bonito basecaller for MinION and Flongle long-read nanopore sequencing

BLAMM : BLAS-based algorithm for finding position weight matrix occurrences in DNA sequences on CPUs and GPUs

Contents

Support

Contact