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Pan-genome de Bruijn graph using the bidirectional FM-index
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- Journal Article
- A1
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VariantscanR : an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals
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CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins
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DeltaMSI : artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data
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FragGeneScanRs : faster gene prediction for short reads
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SUBATOMIC : a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks
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DECONbench : a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification
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Accurate determination of node and arc multiplicities in de bruijn graphs using conditional random fields
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High quality genome assemblies of Mycoplasma bovis using a taxon-specific Bonito basecaller for MinION and Flongle long-read nanopore sequencing
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BLAMM : BLAS-based algorithm for finding position weight matrix occurrences in DNA sequences on CPUs and GPUs