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- 2017
- MAPPI-DAT : data management and analysis for protein-protein interaction data from the high-throughput MAPPIT cell microarray platform
- sfinx: an R package for the elimination of false positives from affinity purification–mass spectrometry datasets
- AFRESh : an adaptive framework for compression of reads and assembled sequences with random access functionality
- A Cytoscape app for motif enumeration with ISMAGS
- MAPPI-DAT: data management and analysis for protein-protein interaction data from the high-throughput MAPPIT cell microarray platform
- 2016
- Simultaneous discovery of cancer subtypes and subtype features by molecular data integration
- Cell line name recognition in support of the identification of synthetic lethality in cancer from text
- Unipept web services for metaproteomics analysis
- 2015
- EVpedia: a community web portal for extracellular vesicles research
- VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering