Ghent University Academic Bibliography

Journal Article
A1
open access

Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth in cotton

Dehe Wang, Xiao Hu, Hanzhe Ye, Yue Wang, Qian Yang, Xiaodong Liang, Zilin Wang, Yifan Zhou, Miaomiao Wen, Xueyan Yuan, et al.

(2023) GENOME BIOLOGY. 24(1).

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Book Chapter

Single cell RNA-sequencing in Arabidopsis root tissues

Yuji Ke (UGent) , Max Minne (UGent) , Thomas Eekhout (UGent) and Bert De Rybel (UGent)

(2023) Plant gene regulatory networks : methods and protocols. In Methods in Molecular Biology 2698. p.41-56

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Journal Article
A1
open access

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

Amelie A. Raz, Gabriela S. Vida, Sarah R. Stern, Sharvani Mahadevaraju, Jaclyn M. Fingerhut, Jennifer M. Viveiros, Soumitra Pal, Jasmine R. Grey, Mara R. Grace, Cameron W. Berry, et al.

(2023) ELIFE. 12.

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The multi-omics single-cell landscape of sinus mucosa in uncontrolled severe chronic rhinosinusitis with nasal polyps

Zhaofeng Xu (UGent) , Yanran Huang (UGent) , Tim Meese (UGent) , Sharon Van Nevel (UGent) , Gabriële Holtappels (UGent) , Stijn Vanhee (UGent) , Barbara M. Bröker, Zhengqi Li, Ellen De Meester (UGent) , Natalie De Ruyck (UGent) , et al.

(2023) CLINICAL IMMUNOLOGY. 256.

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Journal Article
A1
open access

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Viacheslav Mylka (UGent) , Irina Matetovici, Suresh Poovathingal, Jeroen Aerts, Niels Vandamme (UGent) , Ruth Seurinck (UGent) , Kevin Verstaen (UGent) , Gert Hulselmans, Silvie van den Hoecke, Isabelle Scheyltjens, et al.

(2022) GENOME BIOLOGY. 23(1).

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Journal Article
A1
open access

Single-cell transcriptomes and runx2b(−/−) mutants reveal the genetic signatures of intermuscular bone formation in zebrafish

Chun-Hong Nie, Shi-Ming Wan, Yu-Long Chen, Ann Huysseune (UGent) , Ya-Ming Wu, Jia-Jia Zhou, Alexandre Wagner Silva Hilsdorf, Wei-Min Wang, Paul Eckhard Witten (UGent) , Qiang Lin, et al.

(2022) NATIONAL SCIENCE REVIEW. 9(11).

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Journal Article
A1
open access

Advances and opportunities in single-cell transcriptomics for plant research

Carolin Seyfferth (UGent) , Jim Renema (UGent) , Jos Wendrich (UGent) , Thomas Eekhout (UGent) , Ruth Seurinck (UGent) , Niels Vandamme (UGent) , Bernhard Blob, Yvan Saeys (UGent) , Yrjo Helariutta, Kenneth D. Birnbaum, et al.

(2021) ANNUAL REVIEW OF PLANT BIOLOGY. 72. p.847-866

Academic Bibliography

Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth in cotton

Single cell RNA-sequencing in Arabidopsis root tissues

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes

The multi-omics single-cell landscape of sinus mucosa in uncontrolled severe chronic rhinosinusitis with nasal polyps

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Single-cell transcriptomes and runx2b(−/−) mutants reveal the genetic signatures of intermuscular bone formation in zebrafish

Advances and opportunities in single-cell transcriptomics for plant research

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