Ghent University Academic Bibliography

Journal Article
A1
open access

Novel urinary biomarkers for the detection of bladder cancer

Matthijs Oyaert (UGent) , Charles Van Praet (UGent) , Charlotte Delrue (UGent) and Marijn Speeckaert (UGent)

(2025) CANCERS. 17(8).

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Journal Article
A1
open access

A map of integrated cis-regulatory elements enhances gene regulatory analysis in maize

Jasper Staut (UGent) , Nicolás Manosalva Pérez, Andres Matres Ferrando, Indeewari Dissanayake (UGent) and Klaas Vandepoele (UGent)

(2025) PLANT COMMUNICATIONS. 6(7).

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Journal Article
A1
open access

The omics-driven machine learning path to cost-effective precision medicine in chronic kidney disease

M Lopes, R Coletti, f Duranton, Griet Glorieux (UGent) , MA Jaimes Campos, Julie Klein, M Ley, P Perco, A Sampri and A Tur-Sinai

(2025) PROTEOMICS. 25(11-12).

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Medium chain triglycerides induce metabolic shifts in dogs with idiopathic epilepsy : a multi-omics approach

Fien Verdoodt (UGent) , Sofie Bhatti (UGent) , Jenifer Molina, Evy Goossens (UGent) , Lynn Vanhaecke (UGent) , L Van Ham, Myriam Hesta (UGent) and Lieselot Hemeryck (UGent)

(2025) Benelux Metabolomics Days 2025, Abstracts.

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Journal Article
A1
open access

Prediction of surgical resectability after FOLFIRINOX chemotherapy for borderline resectable and locally advanced pancreatic cancer (PeRFormanCe) : a multicenter prospective trial-trial protocol

LUIS ABREU DE CARVALHO (UGent) , Filip Gryspeerdt (UGent) , Wim Ceelen (UGent) , Karen Geboes (UGent) , Suzane Moura Ribeiro (UGent) , Anne Hoorens (UGent) , Nele Vandenbussche (UGent) , Kathleen Claes (UGent) , Clarisse Lecluyse (UGent) , Aliaksandr Anisau (UGent) , et al.

(2025) BMC SURGERY. 25(1).

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Multi-omics roadmap to plant-derived medicines

Jia-Yu Xue, Si-Jie Liu, Jing Wang, Xin-Cheng Huang, Zhi-Chao Xu, Xiao-Xue Fang, Zhen Li (UGent) and Yves Van de Peer (UGent)

(2025) ENGINEERING.

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Journal Article
A1
open access

Integrated gut metabolome and microbiome fingerprinting reveals that dysbiosis precedes allergic inflammation in IgE-mediated pediatric cow's milk allergy

Ellen De Paepe (UGent) , Vera Plekhova (UGent) , Pablo Vangeenderhuysen (UGent) , Nele Baeck, Dominique Bullens, Tania Claeys, Marilyn De Graeve (UGent) , Kristien Kamoen, Anneleen Notebaert, Tom Van de Wiele (UGent) , et al.

(2024) ALLERGY. 79(4). p.949-963

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Journal Article
A1
open access

A proteogenomic atlas of the human neural retina

Tabea V. Riepe, Merel Stemerdink, Renee Salz, Alfredo Dueñas Rey, Suzanne E. de Bruijn, Erica Boonen, Tomasz Z. Tomkiewicz, Michael Kwint, Jolein Gloerich, Hans J. C. T. Wessels, et al.

(2024) FRONTIERS IN GENETICS. 15.

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Journal Article
A1
open access

A single-cell multimodal view on gene regulatory network inference from transcriptomics and chromatin accessibility data

Jens Uwe Loers (UGent) and Vanessa Vermeirssen (UGent)

(2024) BRIEFINGS IN BIOINFORMATICS. 25(5).

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Book Chapter

Improved production of novel (bola) glycolipid biosurfactants with the yeast Starmerella bombicola through an integrative approach combining genetic engineering and multiomics analyses

Martijn Castelein (UGent) , Nicolas de Fooz (UGent) , Goedele Luyten (UGent) , Lisa Van Renterghem, Sven Dierickx, Stijn Bovijn (UGent) , Sophie Roelants (UGent) , Lynn Vanhaecke (UGent) and Wim Soetaert (UGent)

(2023) Biosurfactants : research and development. In Foundations and Frontiers in Enzymology p.183-202

Academic Bibliography

Novel urinary biomarkers for the detection of bladder cancer

A map of integrated cis-regulatory elements enhances gene regulatory analysis in maize

The omics-driven machine learning path to cost-effective precision medicine in chronic kidney disease

Medium chain triglycerides induce metabolic shifts in dogs with idiopathic epilepsy : a multi-omics approach

Prediction of surgical resectability after FOLFIRINOX chemotherapy for borderline resectable and locally advanced pancreatic cancer (PeRFormanCe) : a multicenter prospective trial-trial protocol

Multi-omics roadmap to plant-derived medicines

Integrated gut metabolome and microbiome fingerprinting reveals that dysbiosis precedes allergic inflammation in IgE-mediated pediatric cow's milk allergy

A proteogenomic atlas of the human neural retina

A single-cell multimodal view on gene regulatory network inference from transcriptomics and chromatin accessibility data

Improved production of novel (bola) glycolipid biosurfactants with the yeast Starmerella bombicola through an integrative approach combining genetic engineering and multiomics analyses

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