Ghent University Academic Bibliography

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Computational insights into the natural phage endolysin linker landscape

Emma Cremelie (UGent) , Alexandre Boulay (UGent) , Roberto Vázquez (UGent) and Yves Briers (UGent)

(2026) BIODATA MINING. 19(1).
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Resolving the stasis-dynamism paradox : genome evolution in tree ferns

Zuoying Wei (UGent) , Hengchi Chen (UGent) , Chao Feng, Zengqiang Xia, Yves Van de Peer (UGent) , Ming Kang and Jing Wang

(2025) MOLECULAR BIOLOGY AND EVOLUTION. 42(10).
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Comparative biology needs de novo transcriptome assemblies : drawing attention towards amphibians

Maria Torres-Sanchez, Sandra Goutte, H. Christoph Liedtke, Steven J. R. Allain, Md. Sabbir Ahammed, Natalie Calatayud, Aaron Comeault, Kathryn Elmer, Paula C. Eterovick, Edward Gilbert, et al.

(2025) AMPHIBIA-REPTILIA. 46(3). p.283-301
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Flavonoids and anthocyanins in seagrasses : implications for climate change adaptation and resilience

Jana Botes, Xiao Ma (UGent) , Jiyang Chang (UGent) , Yves Van de Peer (UGent) and Dave Kenneth Berger

(2025) FRONTIERS IN PLANT SCIENCE. 15.
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MpPUB9, a U‐box E3 ubiquitin ligase, acts as a positive regulator by promoting the turnover of MpEXO70.1 under high salinity in Marchantia polymorpha

Cheol Jin Lim, Hyeon Ji Seo, Haijing Yin, Na Hyun Cho, Hee Woong Yang, Tae Hyeon Park, Yun Ju Kim, Woo Taek Kim and Dong Hye Seo (UGent)

(2024) NEW PHYTOLOGIST. 244(6). p.2343-2363
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Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage

Kavitha Uthanumallian, Andrea Del Cortona, Susana M. Coelho, Olivier De Clerck (UGent) , Sebastian Duchene and Heroen Verbruggen

(2024) GENOME RESEARCH. 34(8). p.1130-1139
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The neighborhood of the Spike gene is a hotspot for modular intertypic homologous and nonhomologous recombination in Coronavirus genomes

Marios Nikolaidis, Panayotis Markoulatos, Yves Van de Peer (UGent) , Stephen G Oliver and Grigorios D Amoutzias

(2022) MOLECULAR BIOLOGY AND EVOLUTION. 39(1).
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Genome streamlining in a minute herbivore that manipulates its host plant

Robert Greenhalgh, Wannes Dermauw (UGent) , Joris J. Glas, Stephane Rombauts (UGent) , Nicky Wybouw (UGent) , Jainy Thomas, Juan M. Alba, Ellen J. Pritham, Saioa Legarrea, René Feyereisen (UGent) , et al.

(2020) ELIFE. 9.
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Genome-enabled insights into the biology of thrips as crop pests

Dorith Rotenberg, Aaron A. Baumann, Sulley Ben-Mahmoud, Olivier Christiaens (UGent) , Wannes Dermauw (UGent) , Panagiotis Ioannidis, Chris G. C. Jacobs, Iris M. Vargas Jentzsch, Jonathan E. Oliver, Monica F. Poelchau, et al.

(2020) BMC BIOLOGY. 18(1).
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Applications of next-generation sequencing technologies and computational tools in molecular evolution and aquatic animals conservation studies : a short review

Min Pau Tan, Li Lian Wong, Siti Aisyah Razali, Nor Afiqah-Aleng, Siti Azizah Mohd Nor, Yeong Yik Sung, Yves Van de Peer (UGent) , Patrick Sorgeloos (UGent) and Muhd Danish-Daniel

(2019) EVOLUTIONARY BIOINFORMATICS. 15.

Academic Bibliography

Computational insights into the natural phage endolysin linker landscape

Resolving the stasis-dynamism paradox : genome evolution in tree ferns

Comparative biology needs de novo transcriptome assemblies : drawing attention towards amphibians

Flavonoids and anthocyanins in seagrasses : implications for climate change adaptation and resilience

MpPUB9, a U‐box E3 ubiquitin ligase, acts as a positive regulator by promoting the turnover of MpEXO70.1 under high salinity in Marchantia polymorpha

Genome-wide patterns of selection–drift variation strongly associate with organismal traits across the green plant lineage

The neighborhood of the Spike gene is a hotspot for modular intertypic homologous and nonhomologous recombination in Coronavirus genomes

Genome streamlining in a minute herbivore that manipulates its host plant

Genome-enabled insights into the biology of thrips as crop pests

Applications of next-generation sequencing technologies and computational tools in molecular evolution and aquatic animals conservation studies : a short review

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