Ghent University Academic Bibliography

Journal Article
A1
open access

Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis

Markéta Luklová, Marieke Dubois (UGent) , Michaela Kameniarová, Klára Plačková, Jan Novák, Romana Kopecká, Michal Karady, Jaroslav Pavlů, Jan Skalák, Sunita Jindal, et al.

(2025) PLANT CELL AND ENVIRONMENT. 48(7). p.5030-5052

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A1
open access

Epigenomic preconditioning of peripheral monocytes determines their transcriptional response to the tumor microenvironment.

Máté Kiss, Laszlo Halasz, Eva Hadadi, Wilhelm K. Berger, Petros Tzerpos, Szilard Poliska, Daliya Kancheva, Aurélie Gabriel, Romina Mora Barthelmess, Ayla Debraekeleer, et al.

(2025) GENOME MEDICINE. 17(1).

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A1
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Warm temperature modifies cell fates to reduce stomata production in Arabidopsis

Josué Saiz‐Pérez, Alexandra Baekelandt (UGent) , Jonatan Illescas‐Miranda, Lieven Sterck (UGent) , Marnik Vuylsteke (UGent) , Ji Eun Kim, Boyu Guo (UGent) , Bénédicte Desvoyes, Crisanto Gutierrez, Eugenia Russinova (UGent) , et al.

(2025) NEW PHYTOLOGIST. 248(2). p.672-689

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A1
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Resolving the stasis-dynamism paradox : genome evolution in tree ferns

Zuoying Wei (UGent) , Hengchi Chen (UGent) , Chao Feng, Zengqiang Xia, Yves Van de Peer (UGent) , Ming Kang and Jing Wang

(2025) MOLECULAR BIOLOGY AND EVOLUTION. 42(10).

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A1
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High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar

Tian-Le Shi, Kai-Hua Jia, Yu-Tao Bao, Shuai Nie, Xue-Chan Tian, Xue-Mei Yan, Zhao-Yang Chen, Zhi-Chao Li, Shi-Wei Zhao, Hai-Yao Ma, et al.

(2024) PLANT PHYSIOLOGY. 195(1). p.652-670

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Journal Article
A1
open access

How temperature modulates the expression of pathogenesis-related molecules of the cross-kingdom pathogen Lasiodiplodia hormozganensis

Carina Félix, Rodrigo Silva Meneses, Micael F. M. Gonçalves, Ana S. Duarte, Jesus V. Jorrín-Novo, Yves Van de Peer (UGent) , Dieter Deforce (UGent) , Filip Van Nieuwerburgh (UGent) , Artur Alves and Ana C. Esteves

(2024) SCIENCE OF THE TOTAL ENVIRONMENT. 927.

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A1
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Nitrate and ammonium, the yin and yang of nitrogen uptake : a time-course transcriptomic study in rice

Pierre-Mathieu Pélissier, Boris Parizot (UGent) , Letian Jia, Alexa De Knijf (UGent) , Vera Goossens (UGent) , Pascal Gantet, Antony Champion, Dominique Audenaert (UGent) , Wei Xuan, Tom Beeckman (UGent) , et al.

(2024) FRONTIERS IN PLANT SCIENCE. 15.

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Journal Article
A1
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The genome‐wide response of Dermatophagoides pteronyssinus to cystatin A, a peptidase inhibitor from human skin, sheds light on its digestive physiology and allergenicity

José Cristian Vidal‐Quist, Félix Ortego, Stephane Rombauts (UGent) and Pedro Hernández‐Crespo

(2024) INSECT MOLECULAR BIOLOGY. 33(6). p.662-677

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Transcriptome analysis of neuropeptides in the beneficial insect lacewing (Chrysoperla carnea) identifies kinins as a selective pesticide target : a biostable kinin analogue with activity against the peach potato aphid Myzus persicae

Shi Yan (UGent) , Aniruddha Pandit, Ronald J. Nachman, Olivier Christiaens (UGent) , Shireen A. Davies, Julian A. T. Dow and Guy Smagghe (UGent)

(2023) JOURNAL OF PEST SCIENCE. 96(1). p.253-264

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A1
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Comparative transcriptomics of porcine liver-resident CD8αdim, liver CD8αhigh and circulating blood CD8αhigh NK cells reveals an intermediate phenotype of liver CD8αhigh NK cells

Leen Hermans, Sofie Denaeghel, Robert J. J. Jansens, Steffi De Pelsmaeker, Filip Van Nieuwerburgh (UGent) , Dieter Deforce (UGent) , Everardo Hegewisch-Solloa, Emily M. Mace, Eric Cox (UGent) , Bert Devriendt (UGent) , et al.

(2023) FRONTIERS IN IMMUNOLOGY. 14.

Academic Bibliography

Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis

Epigenomic preconditioning of peripheral monocytes determines their transcriptional response to the tumor microenvironment.

Warm temperature modifies cell fates to reduce stomata production in Arabidopsis

Resolving the stasis-dynamism paradox : genome evolution in tree ferns

High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar

How temperature modulates the expression of pathogenesis-related molecules of the cross-kingdom pathogen Lasiodiplodia hormozganensis

Nitrate and ammonium, the yin and yang of nitrogen uptake : a time-course transcriptomic study in rice

The genome‐wide response of Dermatophagoides pteronyssinus to cystatin A, a peptidase inhibitor from human skin, sheds light on its digestive physiology and allergenicity

Transcriptome analysis of neuropeptides in the beneficial insect lacewing (Chrysoperla carnea) identifies kinins as a selective pesticide target : a biostable kinin analogue with activity against the peach potato aphid Myzus persicae

Comparative transcriptomics of porcine liver-resident CD8αdim, liver CD8αhigh and circulating blood CD8αhigh NK cells reveals an intermediate phenotype of liver CD8αhigh NK cells

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