Ghent University Academic Bibliography

Journal Article
A1
open access

Towards building a quantitative proteomics toolbox in precision medicine : a mini-review

Alejandro Correa Rojo, Dries Heylen, Jan Aerts, Olivier Thas (UGent) , Jef Hooyberghs, Gökhan Ertaylan and Dirk Valkenborg

(2021) FRONTIERS IN PHYSIOLOGY. 12.

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Assessment of fipronil toxicity to the freshwater midge Chironomus riparius : molecular, biochemical, and organismal responses

Hugo Soares Monteiro, João LT Pestana, Sara C Novais, Sara Leston, Fernando Ramos, Amadeu MVM Soares, Bart Devreese (UGent) and Marco FL Lemos

(2019) AQUATIC TOXICOLOGY. 216.

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Proteomic characterization of Withaferin A-targeted protein networks for the treatment of monoclonal myeloma gammopathies

Martin Dom, Fritz Offner (UGent) , Wim Vanden Berghe and Xaveer Van Ostade

(2018) JOURNAL OF PROTEOMICS. 179. p.17-29

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Effect of the anode potential on the physiology and proteome of Shewanella oneidensis MR-1

Christy Grobbler, Bernardino Virdis, Amanda Nouwens, Falk Harnisch, Korneel Rabaey (UGent) and Philip L Bond

(2018) BIOELECTROCHEMISTRY. 119. p.172-179

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Journal Article
A1
open access

FOXO/DAF-16 activation slows down turnover of the majority of proteins in C. elegans

Ineke Dhondt (UGent) , Vladislav A Petyuk, Huaihan Cai (UGent) , Lieselot Vandemeulebroucke (UGent) , Andy Vierstraete (UGent) , Richard D Smith, Geert Depuydt (UGent) and Bart Braeckman (UGent)

(2016) CELL REPORTS. 16(11). p.3028-3040

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Journal Article
A1
open access

An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics

Giel Vandemoortele, An Staes (UGent) , Giulia Gonnelli (UGent) , Noortje Samyn (UGent) , Delphine De Sutter (UGent) , Elien Vandermarliere (UGent) , Evy Timmerman (UGent) , Kris Gevaert (UGent) , Lennart Martens (UGent) and Sven Eyckerman (UGent)

(2016) SCIENTIFIC REPORTS. 6.

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Journal Article
A1
open access

Designing biomedical proteomics experiments : state-of-the-art and future perspectives

Evelyne Maes, Pieter Kelchtermans (UGent) , Wout Bittremieux, Kurt De Grave, Sven Degroeve (UGent) , Jef Hooyberghs, Inge Mertens, Geert Baggerman, Jan Ramon, Kris Laukens, et al.

(2016) EXPERT REVIEW OF PROTEOMICS. 13(5). p.495-511

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Database search engines : paradigms, challenges and solutions

Kenneth Verheggen (UGent) , Lennart Martens (UGent) , Frode S. Berven, Harald Barsnes and Marc Vaudel

(2016) Modern proteomics : sample preparation, analysis and practical applications. 919. p.147-156

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Proteomic identification of cysteine cathepsin substrates shed from the surface of cancer cells

Barbara Sobotič, Matej Vizovišek, Robert Vidmar, Petra Van Damme (UGent) , Vasilena Gocheva, Johanna A Joyce, Kris Gevaert (UGent) , Vito Turk, Boris Turk and Marko Fonović

(2015) MOLECULAR & CELLULAR PROTEOMICS. 14(8). p.2213-2228

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Ariadne's thread : a robust software solution leading to automated absolute and relative quantification of SRM data

Sara Nasso, Sandra Goetze and Lennart Martens (UGent)

(2015) JOURNAL OF PROTEOME RESEARCH. 14(9). p.3779-3792

Academic Bibliography

Towards building a quantitative proteomics toolbox in precision medicine : a mini-review

Assessment of fipronil toxicity to the freshwater midge Chironomus riparius : molecular, biochemical, and organismal responses

Proteomic characterization of Withaferin A-targeted protein networks for the treatment of monoclonal myeloma gammopathies

Effect of the anode potential on the physiology and proteome of Shewanella oneidensis MR-1

FOXO/DAF-16 activation slows down turnover of the majority of proteins in C. elegans

An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics

Designing biomedical proteomics experiments : state-of-the-art and future perspectives

Database search engines : paradigms, challenges and solutions

Proteomic identification of cysteine cathepsin substrates shed from the surface of cancer cells

Ariadne's thread : a robust software solution leading to automated absolute and relative quantification of SRM data

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