Ghent University Academic Bibliography

Journal Article
A1
open access

Mutations in RNU7-1 weaken secondary RNA structure, induce MCP-1 and CXCL10 in CSF, and result in Aicardi-Goutières syndrome with severe end-organ involvement

Leslie Naesens (UGent) , Josephine Nemegeer, Filip Roelens, Lore Vallaeys, Marije Meuwissen, Katrien Janssens, PATRICK VERLOO (UGent) , Benson Ogunjimi, Dimitri Hemelsoet (UGent) , Levi Hoste (UGent) , et al.

(2022) JOURNAL OF CLINICAL IMMUNOLOGY. 42(5). p.962-974

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Posttranslational regulation of the exon skipping machinery controls aberrant splicing in leukemia

Yalu Zhou, Cuijuan Han, Eric Wang, Adam H. Lorch, Valentina Serafin, Byoung-Kyu Cho, Blanca T. Guttierrez Diaz, Julien Calvo, Celestia Fang, Alireza Khodadadi-Jamayran, et al.

(2020) CANCER DISCOVERY. 10(9). p.1388-1409

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Journal Article
A2
open access

The medium-size noncoding RNA transcriptome of Ostreococcus tauri, the smallest living eukaryote, reveals a large family of small nucleolar RNAs displaying multiple genomic expression strategies

Laurie Bousquet, Claire Hemon, Paul Malburet, François Bucchini (UGent) , Klaas Vandepoele (UGent) , Nigel Grimsley, Herve Moreau and Manuel Echeverria

(2020) NAR GENOMICS AND BIOINFORMATICS. 2(4).

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Journal Article
A1
open access

Histone 2B monoubiquitination complex integrates transcript elongation with RNA processing at circadian clock and flowering regulators

Magdalena Woloszynska (UGent) , Sabine Le Gall (UGent) , Pia Neyt (UGent) , Tommaso Matteo Boccardi (UGent) , Marion Grasser, Gernot Längst, Stijn Aesaert (UGent) , Griet Coussens (UGent) , Stijn Dhondt (UGent) , Eveline Van De Slijke (UGent) , et al.

(2019) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 116(16). p.8060-8069

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Post-transcriptional regulation of the oxidative stress response in plants

Valerie Van Ruyskensvelde, Frank Van Breusegem (UGent) and Katrien Van Der Kelen (UGent)

(2018) FREE RADICAL BIOLOGY AND MEDICINE. 122. p.181-192

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Journal Article
A1
open access

HIV-1 Vpr N-terminal tagging affects alternative splicing of the viral genome

Ann Baeyens (UGent) , Evelien Naessens (UGent) , Anouk Van Nuffel (UGent) , Karin Weening (UGent) , Anne-Marie Reilly, Eva Claeys, Wim Trypsteen (UGent) , Linos Vandekerckhove (UGent) , Sven Eyckerman (UGent) , Kris Gevaert (UGent) , et al.

(2016) SCIENTIFIC REPORTS. 6.

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Genome annotation in plants and fungi: EuGène as a model platform

Sylvain Foissac, Jérôme Gouzy, Stephane Rombauts (UGent) , Catherine Mathé (UGent) , Joëlle Amselem, Lieven Sterck (UGent) , Yves Van de Peer (UGent) , Pierre Rouzé (UGent) and Thomas Schiex

(2008) CURRENT BIOINFORMATICS. 3(2). p.87-97

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Journal Article
A1
open access

Current methods of gene prediction, their strengths and weaknesses

Catherine Mathé (UGent) , Marie-France Sagot, Thomas Schiex and Pierre Rouzé (UGent)

(2002) NUCLEIC ACIDS RESEARCH. 30(19). p.4103-4117

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

Samir Kaul, Hean L Koo, Jennifer Jenkins, Michael Rizzo, Timothy Rooney, Luke J Tallon, Tamara Feldblyum, William Nierman, Maria-Ines Benito, XiaoYing Lin, et al.

(2000) NATURE. 408(6814). p.796-815

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Genome annotation: which tools do we have for it?

Pierre Rouzé (UGent) , Nathalie Pavy and Stephane Rombauts (UGent)

(1999) CURRENT OPINION IN PLANT BIOLOGY. 2(2). p.90-95

Academic Bibliography

Mutations in RNU7-1 weaken secondary RNA structure, induce MCP-1 and CXCL10 in CSF, and result in Aicardi-Goutières syndrome with severe end-organ involvement

Posttranslational regulation of the exon skipping machinery controls aberrant splicing in leukemia

The medium-size noncoding RNA transcriptome of Ostreococcus tauri, the smallest living eukaryote, reveals a large family of small nucleolar RNAs displaying multiple genomic expression strategies

Histone 2B monoubiquitination complex integrates transcript elongation with RNA processing at circadian clock and flowering regulators

Post-transcriptional regulation of the oxidative stress response in plants

HIV-1 Vpr N-terminal tagging affects alternative splicing of the viral genome

Genome annotation in plants and fungi: EuGène as a model platform

Current methods of gene prediction, their strengths and weaknesses

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

Genome annotation: which tools do we have for it?

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