Ghent University Academic Bibliography

Correlating stimulated emission depletion microscopy with fluorescence lifetime imaging microscopy to study the TIE2 protein on kidney glomerular podocytes

Iulia-Aneta Dénes (UGent) , Irina Okkelman (UGent) , Herlinde De Keersmaecker (UGent) , Pieter Cornillie (UGent) , Ruslan Dmitriev (UGent) and Ward De Spiegelaere (UGent)

(2026) JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY. 74(2). p.143-161

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A1
open access

JASPAR 2026 : expansion of transcription factor binding profiles and integration of deep learning models

Damla Ovek Baydar, Ieva Rauluseviciute, Dina R Aronsen, Romain Blanc-Mathieu, Ine Bonthuis, Herman De Beukelaer (UGent) , Katalin Ferenc, Alice Jegou, Vipin Kumar, Roza Berhanu Lemma, et al.

(2026) NUCLEIC ACIDS RESEARCH. 54(D1). p.D184-D193

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A1
open access

Cross-species cellular mapping and humanization of Fcγ receptors to advance antibody modeling

Karel Van Damme (UGent) , Dorine Sichien (UGent) , Katrien Van Der Borght (UGent) , Justine Van Moorleghem (UGent) , Sofie Van Gassen (UGent) , Joseph Jorssen, Seppe De Winter, Elisabeth De Leeuw (UGent) , Caihong Wang, Qingqing Chai, et al.

(2026) SCIENCE IMMUNOLOGY. 11(115).

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A1
open access

The surface proteome of bovine unsexed and sexed spermatozoa

Patrícia Pinto-Pinho, Joana Quelhas, Francis Impens (UGent) , Sara Dufour (UGent) , Delphi Van Haver (UGent) , Graça Lopes, António Rocha, Rosário Pinto-Leite, Margarida Fardilha and Bruno Colaço

(2025) ANIMALS. 15(4).

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A1
open access

Antibody-mediated TGF-β1 activation for the treatment of diseases caused by deleterious T cell activity

Fanny Lambert, Jan Félix (UGent) , Séverine Wautier, Emilie Dupre, Mathieu Jamez, Camille Michiels, Mélanie Gaignage, Lore Mariën, Manon Lesage, Bas van der Woning, et al.

(2025) CELL REPORTS. 44(8).

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Neutrophil-derived chitinase 3-like 1 drives immunosuppression in triple-negative breast cancer : insights from a CHI3L1 knockout mouse model

Robbe Salembier (UGent) , Caro De Haes (UGent) , Bo Wylin (UGent) , Kristel Demeyere (UGent) , Evelyne Meyer (UGent) and Jonas Steenbrugge (UGent)

(2025) EACR Conference 'Goodbye Flat Biology : ex vivo to in vivo models of cancer', Abstracts.

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A1
open access

Effect of inoculation dose on infection kinetics and immune responses to Giardia

Bregt Decorte (UGent) , Charlotte Van Crombrugge (UGent) and Peter Geldhof (UGent)

(2025) SCIENTIFIC REPORTS. 16(1).

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A1
open access

Spotless, a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics

Chananchida Sang-aram (UGent) , Robin Browaeys (UGent) , Ruth Seurinck (UGent) and Yvan Saeys (UGent)

(2024) ELIFE. 12.

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Journal Article
A2
open access

TCR transgenic clone selection guided by immune receptor analysis and single-cell RNA expression of polyclonal responders

Nincy Debeuf (UGent) , Sahine Lameire (UGent) , Manon Vanheerswynghels (UGent) , Julie Deckers (UGent) , Caroline De Wolf (UGent) , Wendy Toussaint (UGent) , Rein Verbeke (UGent) , Kevin Verstaen (UGent) , Hamida Hammad (UGent) , Stijn Vanhee (UGent) , et al.

(2024) ELIFE. 13.

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A1
open access

Ym1 protein crystals promote type 2 immunity

Ines Heyndrickx (UGent) , Kim Deswarte (UGent) , Kenneth Verstraete (UGent) , Koen Verschueren (UGent) , Ursula Smole (UGent) , Helena Catharine Aegerter (UGent) , Ann Dansercoer (UGent) , Hamida Hammad (UGent) , Savvas Savvides (UGent) and Bart Lambrecht (UGent)

(2024) ELIFE. 12.

Academic Bibliography

Correlating stimulated emission depletion microscopy with fluorescence lifetime imaging microscopy to study the TIE2 protein on kidney glomerular podocytes

JASPAR 2026 : expansion of transcription factor binding profiles and integration of deep learning models

Cross-species cellular mapping and humanization of Fcγ receptors to advance antibody modeling

The surface proteome of bovine unsexed and sexed spermatozoa

Antibody-mediated TGF-β1 activation for the treatment of diseases caused by deleterious T cell activity

Neutrophil-derived chitinase 3-like 1 drives immunosuppression in triple-negative breast cancer : insights from a CHI3L1 knockout mouse model

Effect of inoculation dose on infection kinetics and immune responses to Giardia

Spotless, a reproducible pipeline for benchmarking cell type deconvolution in spatial transcriptomics

TCR transgenic clone selection guided by immune receptor analysis and single-cell RNA expression of polyclonal responders

Ym1 protein crystals promote type 2 immunity

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