Ghent University Academic Bibliography

Journal Article
A1
open access

Bryophytes hold a larger gene family space than vascular plants

Shanshan Dong, Sibo Wang, Linzhou Li, Jin Yu, Yongxia Zhang, Jia-Yu Xue, Hengchi Chen (UGent) , Jianchao Ma, Yuying Zeng, Yuqing Cai, et al.

(2025) NATURE GENETICS. 57(10). p.2562-2569

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Journal Article
A1
open access

Ancestral duplication of MADS‐box genes in land plants empowered the functional divergence between sporophytes and gametophytes

Yichun Qiu, Zhen Li (UGent) and Claudia Köhler

(2024) NEW PHYTOLOGIST. 244(2). p.358-363

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Journal Article
A1
open access

Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants

Yichun Qiu, Zhen Li (UGent) , Dirk Walther and Claudia Köhler

(2023) MOLECULAR BIOLOGY AND EVOLUTION. 40(9).

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Journal Article
A1
open access

Phylotranscriptomic insights into a Mesoproterozoic-Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Zheng Hou, Xiaoya Ma, Xuan Shi, Xi Li, Lingxiao Yang, Shuhai Xiao, Olivier De Clerck (UGent) , Frédérik Leliaert (UGent) and Bojian Zhong

(2022) NATURE COMMUNICATIONS. 13(1).

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Journal Article
A1
open access

Whole-genome microsynteny-based phylogeny of angiosperms

Tao Zhao (UGent) , Arthur Zwaenepoel, Jia-Yu Xue, Shu-Min Kao, Zhen Li (UGent) , M. Eric Schranz and Yves Van de Peer (UGent)

(2021) NATURE COMMUNICATIONS. 12(1).

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Journal Article
A1
open access

A comprehensive phylogenetic analysis of the MAP4K family in the green lineage

Lixia Pan, Cássio Flávio Fonseca de Lima, Lam Dai Vu (UGent) and Ive De Smet (UGent)

(2021) FRONTIERS IN PLANT SCIENCE. 12.

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Sequencing and analyzing the transcriptomes of a thousand species across the tree of life for green plants

Gane Ka-Shu Wong, Douglas E. Soltis, Jim Leebens-Mack, Norman J. Wickett, Michael S. Barker, Yves Van de Peer (UGent) , Sean W. Graham and Michael Melkonian

(2020) ANNUAL REVIEW OF PLANT BIOLOGY. 71. p.741-765

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The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution

Daniel Lang, Kristian K Ullrich, Florent Murat, Joerg Fuchs, Jerry Jenkins, Fabian B Haas, Mathieu Piednoel, Heidrun Gundlach, Michiel Van Bel (UGent) , Rabea Meyberg, et al.

(2018) PLANT JOURNAL. 93(3). p.515-533

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Improving phylogenetic inference of core Chlorophyta using chloroplast sequences with strong phylogenetic signals and heterogeneous models

Ling Fang, Frédérik Leliaert (UGent) , Phil M Novis, Zhenhua Zhang, Huan Zhu, Guoxiang Liu, David Penny and Bojian Zhong

(2018) MOLECULAR PHYLOGENETICS AND EVOLUTION. 127. p.248-255

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Journal Article
A1
open access

Chloroplast phylogenomic analyses reveal the deepest-branching lineage of the Chlorophyta, Palmophyllophyceae class. nov.

Frédérik Leliaert (UGent) , Ana Tronholm, Claude Lemieux, Monique Turmel, Michael S DePriest, Debashish Bhattacharya, Kenneth G Karol, Suzanne Fredericq, Frederick W Zechman and Juan M Lopez-Bautista

(2016) SCIENTIFIC REPORTS. 6.

Academic Bibliography

Bryophytes hold a larger gene family space than vascular plants

Ancestral duplication of MADS‐box genes in land plants empowered the functional divergence between sporophytes and gametophytes

Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants

Phylotranscriptomic insights into a Mesoproterozoic-Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Whole-genome microsynteny-based phylogeny of angiosperms

A comprehensive phylogenetic analysis of the MAP4K family in the green lineage

Sequencing and analyzing the transcriptomes of a thousand species across the tree of life for green plants

The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution

Improving phylogenetic inference of core Chlorophyta using chloroplast sequences with strong phylogenetic signals and heterogeneous models

Chloroplast phylogenomic analyses reveal the deepest-branching lineage of the Chlorophyta, Palmophyllophyceae class. nov.

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