Ghent University Academic Bibliography

Your filters: cql: jcr.category exact "MATHEMATICAL & COMPUTATIONAL BIOLOGY"

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Galaxy Training : a powerful framework for teaching!

Saskia Hiltemann, Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg, Pratik D. Jagtap, Thomas Wollmann, Anthony Bretaudeau, Nadia Goué, et al.

(2023) PLOS COMPUTATIONAL BIOLOGY. 19(1).
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Mutate and observe : utilizing deep neural networks to investigate the impact of mutations on translation initiation

Utku Özbulak (UGent) , Hyun Jung Lee (UGent) , Jasper Zuallaert (UGent) , Wesley De Neve (UGent) , Stephen Depuydt (UGent) and Joris Vankerschaver (UGent)

(2023) BIOINFORMATICS. 39(6).
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VariantscanR : an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals

Fréderique Boeykens (UGent) , Sofie Bhatti (UGent) , Luc Peelman (UGent) and Bart Broeckx (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
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Predicting yield of individual field-grown rapeseed plants from rosette-stage leaf gene expression

Sam De Meyer (UGent) , Daniel Felipe Cruz Galvis (UGent) , Tom De Swaef (UGent) , Peter Lootens, Jolien De Block (UGent) , Kevin Bird, Heike Sprenger (UGent) , Michael Van de Voorde (UGent) , Stijn Hawinkel (UGent) , Tom Van Hautegem (UGent) , et al.

(2023) PLOS COMPUTATIONAL BIOLOGY. 19(5).
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syntenet : an R/Bioconductor package for the inference and analysis of synteny networks

Fabricio De Almeida Silva (UGent) , Tao Zhao, Kristian K Ullrich, M Eric Schranz and Yves Van de Peer (UGent)

(2023) BIOINFORMATICS. 39(1).
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DeltaMSI : artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data

Koen Swaerts, Franceska Dedeurwaerdere, Dieter De Smet, Peter De Jaeger and Geert Martens (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
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CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins

Homin Park (UGent) , Jong Bum Won, Yunseol Park, Esla Timothy Anzaku (UGent) , Joris Vankerschaver (UGent) , Arnout Van Messem (UGent) , Wesley De Neve (UGent) and Hyunjin Shim (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
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Pan-genome de Bruijn graph using the bidirectional FM-index

Lore Depuydt (UGent) , Luca Renders (UGent) , Thomas Abeel (UGent) and Jan Fostier (UGent)

(2023) BMC BIOINFORMATICS. 24(1).
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Ionmob : a Python package for prediction of peptide collisional cross-section values

David Teschner, David Gomez-Zepeda, Arthur Declercq (UGent) , Mateusz K Łącki, Seymen Avci, Konstantin Bob, Ute Distler, Thomas Michna, Lennart Martens (UGent) , Stefan Tenzer, et al.

(2023) BIOINFORMATICS. 39(9).
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Quantitative analysis of the optogenetic excitability of CA1 neurons

Ruben Schoeters (UGent) , Thomas Tarnaud (UGent) , Laila Weyn (UGent) , Wout Joseph (UGent) , Robrecht Raedt (UGent) and Emmeric Tanghe (UGent)

(2023) FRONTIERS IN COMPUTATIONAL NEUROSCIENCE. 17.

Academic Bibliography

Galaxy Training : a powerful framework for teaching!

Mutate and observe : utilizing deep neural networks to investigate the impact of mutations on translation initiation

VariantscanR : an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals

Predicting yield of individual field-grown rapeseed plants from rosette-stage leaf gene expression

syntenet : an R/Bioconductor package for the inference and analysis of synteny networks

DeltaMSI : artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data

CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins

Pan-genome de Bruijn graph using the bidirectional FM-index

Ionmob : a Python package for prediction of peptide collisional cross-section values

Quantitative analysis of the optogenetic excitability of CA1 neurons

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