Ghent University Academic Bibliography

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wgd v2 : a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Hengchi Chen (UGent) , Arthur Zwaenepoel and Yves Van de Peer (UGent)

(2024) BIOINFORMATICS. 40(5).
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Efficient cytometry analysis with FlowSOM in Python boosts interoperability with other single-cell tools

Artuur Couckuyt, Benjamin Rombaut (UGent) , Yvan Saeys (UGent) and Sofie Van Gassen (UGent)

(2024) BIOINFORMATICS. 40(4).
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SCIP : a scalable, reproducible, and open-source pipeline for morphological profiling image cytometry and microscopy data

Maxim Lippeveld (UGent) , Daniel Peralta (UGent) , Andrew Filby and Yvan Saeys (UGent)

(2024) CYTOMETRY PART A. 105(11). p.816-828
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A targeted LC-MRM3 proteomic approach for the diagnosis of SARS-CoV-2 infection in nasopharyngeal swabs

Nicolas Drouin, Hyung L. Elfrink, Stefan A. Boers, Sam van Hugten, Els Wessels, Jutte J.C. de Vries, Geert H. Groeneveld, Paul Miggiels, Bart Van Puyvelde (UGent) , Maarten Dhaenens (UGent) , et al.

(2024) MOLECULAR & CELLULAR PROTEOMICS. 23(7).
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‘From metabolism to metabolism’ : holistic considerations on B-vitamin interactions, biofortification, and deficiencies

Lisa De Zanetti (UGent) and Dominique Van Der Straeten (UGent)

(2024) CURRENT OPINION IN BIOTECHNOLOGY. 87.
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Maximizing sensitivity and selectivity in LC x LC-HRMS for pesticide analysis via exploitation of per-aqueous liquid chromatography

Elena Bandini, Stephanie A. Schuster, Turaj Rahmani (UGent) and Frederic Lynen (UGent)

(2024) JOURNAL OF CHROMATOGRAPHY A. 1738.
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Proceedings of the EuBIC-MS developers meeting 2023

Pedro Beltrao, Tim Van Den Bossche (UGent) , Ralf Gabriels (UGent) , Tanja Holstein (UGent) , Tobias Kockmann, Alireza Nameni (UGent) , Christian Panse, Ralph Schlapbach, Ludwig Lautenbacher, Matthias Mattanovich, et al.

(2024) JOURNAL OF PROTEOMICS. 305.
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ECCB2024 : the 23rd European Conference on Computational Biology

Anu Kukkonen-Macchi, Sampsa Hautaniemi, Katharina F Heil, Merja Heinäniemi, Lars Juhl Jensen, Sini Junttila, Lukas Käll, Asta Laiho, Peter Maccallum, Matti Nykter, et al.

(2024) BIOINFORMATICS. 40(Supplement 2). p.ii1-ii3
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Hydrophilic interaction liquid chromatography : an efficient tool for assessing thorium interaction with phosphorylated biomimetic peptides

Lana Abou-Zeid (UGent) , Albert Pell, Marina Amaral Saraiva, Pascale Delangle and Carole Bresson

(2024) JOURNAL OF CHROMATOGRAPHY A. 1735.
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Uncertainty-aware single-cell annotation with a hierarchical reject option

Lauren Theunissen (UGent) , Thomas Mortier (UGent) , Yvan Saeys (UGent) and Willem Waegeman (UGent)

(2024) BIOINFORMATICS. 40(3).

Academic Bibliography

wgd v2 : a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Efficient cytometry analysis with FlowSOM in Python boosts interoperability with other single-cell tools

SCIP : a scalable, reproducible, and open-source pipeline for morphological profiling image cytometry and microscopy data

A targeted LC-MRM3 proteomic approach for the diagnosis of SARS-CoV-2 infection in nasopharyngeal swabs

‘From metabolism to metabolism’ : holistic considerations on B-vitamin interactions, biofortification, and deficiencies

Maximizing sensitivity and selectivity in LC x LC-HRMS for pesticide analysis via exploitation of per-aqueous liquid chromatography

Proceedings of the EuBIC-MS developers meeting 2023

ECCB2024 : the 23rd European Conference on Computational Biology

Hydrophilic interaction liquid chromatography : an efficient tool for assessing thorium interaction with phosphorylated biomimetic peptides

Uncertainty-aware single-cell annotation with a hierarchical reject option

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