Ghent University Academic Bibliography

Journal Article
A1
open access

Systematic optimization of Cas12a base editors in wheat and maize using the ITER platform

Christophe Gaillochet (UGent) , Alexandra Pena Fernandez (UGent) , Vera Goossens (UGent) , Katelijn D’Halluin, Andrzej Drozdzecki (UGent) , Myriam Shafie, Julie Van Duyse (UGent) , Gert Van Isterdael (UGent) , Camila Gonzalez, Mattias Vermeersch (UGent) , et al.

(2023) GENOME BIOLOGY. 24(1).

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Journal Article
A1
open access

Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth in cotton

Dehe Wang, Xiao Hu, Hanzhe Ye, Yue Wang, Qian Yang, Xiaodong Liang, Zilin Wang, Yifan Zhou, Miaomiao Wen, Xueyan Yuan, et al.

(2023) GENOME BIOLOGY. 24(1).

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Journal Article
A1
open access

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Viacheslav Mylka (UGent) , Irina Matetovici, Suresh Poovathingal, Jeroen Aerts, Niels Vandamme (UGent) , Ruth Seurinck (UGent) , Kevin Verstaen (UGent) , Gert Hulselmans, Silvie van den Hoecke, Isabelle Scheyltjens, et al.

(2022) GENOME BIOLOGY. 23(1).

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Journal Article
A1
open access

Parental genomes segregate into distinct blastomeres during multipolar zygotic divisions leading to mixoploid and chimeric blastocysts

Tine De Coster (UGent) , Heleen Masset, Olga Tsuiko, Maaike Catteeuw (UGent) , Yan Zhao, Nicolas Dierckxsens, Ainhoa Larreategui Aparicio, Eftychia Dimitriadou, Sophie Debrock, Karen Peeraer, et al.

(2022) GENOME BIOLOGY. 23(1).

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Journal Article
A1
open access

PCIP-seq : simultaneous sequencing of integrated viral genomes and their insertion sites with long reads

Maria Artesi, Vincent Hahaut, Basiel Cole (UGent) , Laurens Lambrechts (UGent) , Fereshteh Ashrafi, Ambroise Marçais, Olivier Hermine, Philip Griebel, Natasa Arsic, Frank van der Meer, et al.

(2021) GENOME BIOLOGY. 22(1).

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Journal Article
A1
open access

Response to correspondence on 'Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles : a multi-center evaluation'

Channabasavaiah B. Gurumurthy, Aidan R. O'Brien, Rolen M. Quadros, Jr. Adams, John, Pilar Alcaide, Shinya Ayabe, Johnathan Ballard, Surinder K. Batra, Marie-Claude Beauchamp, Kathleen A. Becker, et al.

(2021) GENOME BIOLOGY. 22(1).

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Journal Article
A1
open access

instaGRAAL : chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

Lyam Baudry, Nadège Guiglielmoni, Hervé Marie-Nelly, Alexandre Cormier, Martial Marbouty, Komlan Avia, Yann Loe Mie, Olivier Godfroy, Lieven Sterck (UGent) , J. Mark Cock, et al.

(2020) GENOME BIOLOGY. 21(1).

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Journal Article
A1
open access

DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumor immunotolerance

Flora D'Anna, Laurien Van Dyck, Jieyi Xiong, Hui Zhao, V Berrens, Rebecca, Junbin Qian, Pawel Bieniasz-Krzywiec, Vikas Chandra, Luc Schoonjans, Jason Matthews, et al.

(2020) GENOME BIOLOGY. 21(1).

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Journal Article
A1
open access

Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

Celestia Fang, Zhenjia Wang, Cuijuan Han, Stephanie L. Safgren, Kathryn A. Helmin, Emmalee R. Adelman, Valentina Serafin, Giuseppe Basso, Kyle P. Eagen, Alexandre Gaspar-Maia, et al.

(2020) GENOME BIOLOGY. 21(1).

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Journal Article
A1
open access

Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles : a multi-center evaluation

Channabasavaiah B. Gurumurthy, Aidan R O'Brien, Rolen M Quadros, John Adams, Pilar Alcaide, Shinya Ayabe, Johnathan Ballard, Surinder K Batra, Marie-Claude Beauchamp, Kathleen A Becker, et al.

(2019) GENOME BIOLOGY. 20(1).

Academic Bibliography

Systematic optimization of Cas12a base editors in wheat and maize using the ITER platform

Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth in cotton

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Parental genomes segregate into distinct blastomeres during multipolar zygotic divisions leading to mixoploid and chimeric blastocysts

PCIP-seq : simultaneous sequencing of integrated viral genomes and their insertion sites with long reads

Response to correspondence on 'Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles : a multi-center evaluation'

instaGRAAL : chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumor immunotolerance

Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles : a multi-center evaluation

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