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- 2016
- Unipept web services for metaproteomics analysis
- Cell line name recognition in support of the identification of synthetic lethality in cancer from text
- 2015
- EVpedia: a community web portal for extracellular vesicles research
- VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering
- Halvade: scalable sequence analysis with MapReduce
- BLSSpeller: exhaustive comparative discovery of conserved cis-regulatory elements
- 2014
- ASP-G: an ASP-based method for finding attractors in genetic regulatory networks
- MAGIC: access portal to a cross-platform gene expression compendium for maize
- unifiedWMWqPCR: the unified Wilcoxon–Mann–Whitney test for analyzing RT-qPCR data in R
- Big data and other challenges in the quest for orthologs