Ghent University Academic Bibliography

Your filters: cql: issn exact "1367-4803"

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wgd v2 : a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Hengchi Chen (UGent) , Arthur Zwaenepoel and Yves Van de Peer (UGent)

(2024) BIOINFORMATICS. 40(5).
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Scywalker : scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing

Peter De Rijk, Tijs Watzeels, Fahri Küçükali, Jasper Van Dongen, Júlia Faura, Patrick Willems (UGent) , Lara De Deyn, Lena Duchateau, Carolin Grones, Thomas Eekhout (UGent) , et al.

(2024) BIOINFORMATICS. 40(9).
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Uncertainty-aware single-cell annotation with a hierarchical reject option

Lauren Theunissen (UGent) , Thomas Mortier (UGent) , Yvan Saeys (UGent) and Willem Waegeman (UGent)

(2024) BIOINFORMATICS. 40(3).
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ECCB2024: The 23rd European Conference on Computational Biology

Anu Kukkonen-Macchi, Sampsa Hautaniemi, Katharina F Heil, Merja Heinäniemi, Lars Juhl Jensen, Sini Junttila, Lukas Käll, Asta Laiho, Peter Maccallum, Matti Nykter, et al.

(2024) Bioinformatics. 40(Supplement_2). p.ii1-ii3
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Efficient cytometry analysis with FlowSOM in Python boosts interoperability with other single-cell tools

Artuur Couckuyt (UGent) , Benjamin Rombaut (UGent) , Yvan Saeys (UGent) and Sofie Van Gassen (UGent)

(2024) BIOINFORMATICS. 40(4).
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Mutate and observe : utilizing deep neural networks to investigate the impact of mutations on translation initiation

Utku Özbulak, Hyun Jung Lee (UGent) , Jasper Zuallaert (UGent) , Wesley De Neve (UGent) , Stephen Depuydt (UGent) and Joris Vankerschaver (UGent)

(2023) BIOINFORMATICS. 39(6).
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syntenet : an R/Bioconductor package for the inference and analysis of synteny networks

Fabricio De Almeida Silva (UGent) , Tao Zhao, Kristian K Ullrich, M Eric Schranz and Yves Van de Peer (UGent)

(2023) BIOINFORMATICS. 39(1).
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Ionmob : a Python package for prediction of peptide collisional cross-section values

David Teschner, David Gomez-Zepeda, Arthur Declercq (UGent) , Mateusz K Łącki, Seymen Avci, Konstantin Bob, Ute Distler, Thomas Michna, Lennart Martens (UGent) , Stefan Tenzer, et al.

(2023) BIOINFORMATICS. 39(9).
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PepGM : a probabilistic graphical model for taxonomic inference of viral proteome samples with associated confidence scores

Tanja Holstein (UGent) , Franziska Kistner, Lennart Martens (UGent) and Thilo Muth

(2023) BIOINFORMATICS. 39(5).
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ELIXIR biovalidator for semantic validation of life science metadata

Isuru Liyanage, Tony Burdett, Bert Droesbeke (UGent) , Karoly Erdos, Rolando Fernandez, Alasdair Gray, Muhammad Haseeb, Simon Jupp, Flavia Penim, Cyril Pommier, et al.

(2022) BIOINFORMATICS. 38(11). p.3141-3142

Academic Bibliography

wgd v2 : a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Scywalker : scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing

Uncertainty-aware single-cell annotation with a hierarchical reject option

ECCB2024: The 23rd European Conference on Computational Biology

Efficient cytometry analysis with FlowSOM in Python boosts interoperability with other single-cell tools

Mutate and observe : utilizing deep neural networks to investigate the impact of mutations on translation initiation

syntenet : an R/Bioconductor package for the inference and analysis of synteny networks

Ionmob : a Python package for prediction of peptide collisional cross-section values

PepGM : a probabilistic graphical model for taxonomic inference of viral proteome samples with associated confidence scores

ELIXIR biovalidator for semantic validation of life science metadata

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