Ghent University Academic Bibliography

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journalArticle
A1
open access

An update on sORFs.org : a repository of small ORFs identified by ribosome profiling

Volodimir Olexiouk (UGent) , Wim Van Criekinge (UGent) and Gerben Menschaert (UGent)

(2018) NUCLEIC ACIDS RESEARCH. 46(D1). p.D497-D502

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journalArticle
A1
open access

A sigma factor toolbox for orthogonal gene expression in Escherichia coli

Indra Bervoets, Maarten Van Brempt (UGent) , Katleen Van Nerom, Bob Van Hove (UGent) , Jo Maertens (UGent) , Marjan De Mey (UGent) and Daniel Charlier

(2018) NUCLEIC ACIDS RESEARCH. 46(4). p.2133-2144

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journalArticle
A1
open access

JASPAR 2018 : update of the open-access database of transcription factor binding profiles and its web framework

Aziz Khan, Oriol Fornes, Arnaud Stigliani, Marius Gheorghe, Jaime A Castro-Mondragon, Robin van der Lee, Adrien Bessy, Jeanne Cheneby, Shubhada Rajabhau Kulkarni (UGent) , Ge Tan, et al.

(2018) NUCLEIC ACIDS RESEARCH. 46(D1). p.D260-D266

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journalArticle
open access

RNAcentral: a hub of information for non-coding RNA sequences

Blake A Sweeney, Anton I Petrov, Boris Burkov, Robert D Finn, Alex Bateman, Maciej Szymanski, Wojciech M Karlowski, Jan Gorodkin, Stefan E Seemann, Jamie J Cannone, et al.

(2018) Nucleic Acids Research.

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journalArticle
open access

Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant

Jonas Defoort (UGent) , Yves Van de Peer (UGent) and Vanessa Vermeirssen (UGent)

(2018) NUCLEIC ACIDS RESEARCH. 46(13). p.6480-6503

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journalArticle
A1
open access

TF2Network : predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information

Shubhada Rajabhau Kulkarni (UGent) , Dries Vaneechoutte (UGent) , Jan Van de Velde (UGent) and Klaas Vandepoele (UGent)

(2018) NUCLEIC ACIDS RESEARCH. 46(6).

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journalArticle
open access

LNCipedia 5: towards a reference set of human long non-coding RNAs

Pieter-Jan Volders (UGent) , Jasper Anckaert (UGent) , Kenneth Verheggen (UGent) , Justine Nuytens (UGent) , Lennart Martens (UGent) , Pieter Mestdagh (UGent) and Jo Vandesompele (UGent)

(2018) Nucleic Acids Research.

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journalArticle
A1
open access

The TriForC database : a comprehensive up-to-date resource of plant triterpene biosynthesis

Karel Miettinen (UGent) , Sabrina Iñigo (UGent) , Lukasz Kreft (UGent) , Jacob Pollier (UGent) , Christof De Bo (UGent) , Alexander Botzki (UGent) , Frederik Coppens (UGent) , Soren Bak and Alain Goossens (UGent)

(2018) NUCLEIC ACIDS RESEARCH. 46(D1). p.D586-D594

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journalArticle
A1
open access

PLAZA 4.0 : an integrative resource for functional, evolutionary and comparative plant genomics

Michiel Van Bel (UGent) , Tim Diels (UGent) , Emmelien Vancaester (UGent) , Lukasz Kreft (UGent) , Alexander Botzki (UGent) , Yves Van de Peer (UGent) , Frederik Coppens (UGent) and Klaas Vandepoele (UGent)

(2018) NUCLEIC ACIDS RESEARCH. 46(D1). p.D1190-D1196

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journalArticle

Tethered imidazole mediated duplex stabilization and its potential for aptamer stabilization

Lars Verdonck (UGent) , Dieter Buyst (UGent) , Anne-Mare de Vries (UGent) , Vicky Gheerardijn (UGent) , Annemieke Madder (UGent) and José Martins (UGent)

(2018) Nucleic Acids Research.

Academic Bibliography

An update on sORFs.org : a repository of small ORFs identified by ribosome profiling

A sigma factor toolbox for orthogonal gene expression in Escherichia coli

JASPAR 2018 : update of the open-access database of transcription factor binding profiles and its web framework

RNAcentral: a hub of information for non-coding RNA sequences

Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant

TF2Network : predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information

LNCipedia 5: towards a reference set of human long non-coding RNAs

The TriForC database : a comprehensive up-to-date resource of plant triterpene biosynthesis

PLAZA 4.0 : an integrative resource for functional, evolutionary and comparative plant genomics

Tethered imidazole mediated duplex stabilization and its potential for aptamer stabilization

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