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Context-dependent codon partition models provide significant increases in model fit in atpB and rbcL protein-coding genes
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Using non-reversible context-dependent evolutionary models to study substitution patterns in primate non-coding sequences
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Modelling the ancestral sequence distribution and model frequencies in context-dependent models for primate non-coding sequences
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Efficient context-dependent model building based on clustering posterior distributions for non-coding sequences
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A model-based approach to study nearest-neighbor influences reveals complex substitution patterns in non-coding sequences
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An improved statistical method for detecting heterotachy in nucleotide sequences