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Phosphoproteome analyses pinpoint the F‐box protein SLOW MOTION as a regulator of warm temperature‐mediated hypocotyl growth in Arabidopsis
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- Journal Article
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Glucocorticoid receptor signaling : intricacies and therapeutic opportunities
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- Journal Article
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Selective modulation of the human glucocorticoid receptor compromises GR chromatin occupancy and recruitment of p300/CBP and the Mediator complex
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- Journal Article
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Structure–function study of a Ca2+-independent metacaspase involved in lateral root emergence
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- Journal Article
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Shift in vacuolar to cytosolic regime of infecting Salmonella from a dual proteome perspective
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- Journal Article
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Complementary peptides represent a credible alternative to agrochemicals by activating translation of targeted proteins
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Targeted profiling of protein phosphorylation in plants
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Increasing the overall proteome coverage by combining protein digestion by Tryp-N and trypsin
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Cell surface biotinylation using furan cross-linking chemistry
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- Journal Article
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Multi-allergen quantification in food using concatemer-based isotope dilution mass spectrometry : a collaborative study
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Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins
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A decoupled Virotrap approach to study the interactomes of N-terminal proteoforms
(2023) Methods in enzymology. In Modifications and targeting of protein termini : part A 684. p.253-287 -
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Expanded in vivo substrate profile of the yeast N-terminal acetyltransferase NatC
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- Journal Article
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Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome
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- Journal Article
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α-1,6-fucosyltransferase plays a critical role during embryogenesis of the hemimetabolous insect Nilaparvata lugens
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- Journal Article
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Mutation of Arabidopsis SME1 and Sm core assembly improves oxidative stress resilience
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- Journal Article
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Machine learning on large-scale proteomics data identifies tissue and cell-type specific proteins
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- Journal Article
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Protein interactors of 3-O sulfated heparan sulfates in human MCI and age-matched control cerebrospinal fluid
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- Journal Article
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Macrophage resistance to ionizing radiation exposure is accompanied by decreased cathepsin D and increased transferrin receptor 1 expression
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- Journal Article
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CysQuant : simultaneous quantification of cysteine oxidation and protein abundance using data dependent or independent acquisition mass spectrometry
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lesSDRF is more : maximizing the value of proteomics data through streamlined metadata annotation
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A preclinical platform for assessing long-term drug efficacy exploiting mechanically tunable scaffolds colonized by a three-dimensional tumor microenvironment
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- Journal Article
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N-terminal proteoforms may engage in different protein complexes
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- Journal Article
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N-terminal acetylation shields proteins from degradation and promotes age-dependent motility and longevity
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Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator
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Reduced levels of misfolded and aggregated mutant p53 by proteostatic activation
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- Journal Article
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Cornification of keratinocytes is associated with differential changes in the catalytic activity and the immunoreactivity of transglutaminase-1
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- Journal Article
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Triazolinedione protein modification : from an overlooked off-target effect to a tryptophan-based bioconjugation strategy
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- Journal Article
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The final maturation state of β-actin involves N-terminal acetylation by NAA80, not N-terminal arginylation by ATE1
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- Journal Article
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Novel assays monitoring direct glucocorticoid receptor protein activity exhibit high predictive power for ligand activity on endogenous gene targets
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- Journal Article
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Limited evidence for protein products of non-coding transcripts in the HEK293T cellular cytosol
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- Miscellaneous
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Mapping the adaptor protein complex interaction network in Arabidopsis identifies P34 as a common stability regulator
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- Journal Article
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SAMBA controls cell division rate during maize development
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- Journal Article
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Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling
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Selecting processing robust markers using high resolution mass spectrometry for the detection of milk in food products
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Development and validation of a quantitative method for multiple allergen detection in food using concatemer-based isotope dilution mass spectrometry
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Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density
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Mass spectrometry and the cellular surfaceome
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A new generation of AD biomarkers : 2019 to 2021
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Abnormal concentrations of acetylated amino acids in cerebrospinal fluid in acetyl‐CoA transporter deficiency
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Machine learning on large-scale proteomics data identifies tissue- and cell type-specific proteins
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A strong cation exchange chromatography protocol for examining N-terminal proteoforms
(2022) Yeast functional genomics : methods and protocols. In Methods in Molecular Biology 2477. p.293-309 -
RNAi of Mannosidase‐Ia in the Colorado potato beetle and changes in the midgut and peritrophic membrane
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Binding of Orysata lectin induces an immune response in insect cells
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A Phelipanche ramosa KAI2 protein perceives strigolactones and isothiocyanates enzymatically
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- Journal Article
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Mechanisms of congenital heart disease caused by NAA15 haploinsufficiency
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Unraveling the MAX2 protein network in Arabidopsis thaliana : identification of the protein phosphatase PAPP5 as a novel MAX2 interactor
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An AKT2-specific nanobody that targets the hydrophobic motif induces cell cycle arrest, autophagy and loss of focal adhesions in MDA-MB-231 cells
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Prune-1 drives polarization of tumor-associated macrophages (TAMs) within the lung metastatic niche in triple-negative breast cancer
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Use of hybrid data-dependent and -independent acquisition spectral libraries empowers dual-proteome profiling
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Mass spectrometry-based clinical proteomics : a revival
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The lectin Orysata induces phosphatase-mediated and carbohydrate-independent aggregation of insect cells
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- Journal Article
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The membrane-localized protein kinase MAP4K4/TOT3 regulates thermomorphogenesis
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- Journal Article
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Robust sequential biophysical fractionation of blood plasma to study variations in the biomolecular landscape of systemically circulating extracellular vesicles across clinical conditions
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Importance of extracellular vesicle secretion at the blood-cerebrospinal fluid interface in the pathogenesis of Alzheimer’s disease
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- Journal Article
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Bacterial genetic engineering by means of recombineering for reverse genetics
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Waveguide-based surface-enhanced Raman spectroscopy detection of protease activity using non-natural aromatic amino acids
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- Journal Article
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Simple peptide quantification approach for MS-based proteomics quality control
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- Journal Article
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MSqRob takes the missing hurdle : uniting intensity- and count-based proteomics
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- Journal Article
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Chemical genetics approach identifies abnormal inflorescence meristem 1 as a putative target of a novel sulfonamide that protects catalase2-deficient Arabidopsis against photorespiratory stress
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- Journal Article
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The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis
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Mutations in the ubiquitin ligase adaptor LZTR1 drive human disease by dysregulating RAS ubiquitination and signaling.
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Improved glucocorticoid receptor ligands : fantastic beasts, but how to find them?
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Listeria monocytogenes impairs SUMOylation for efficient infection (vol 464, pg 1192, 2010)
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Comparative study of concatemer efficiency as an isotope-labelled internal standard for allergen quantification
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Protein amino-termini and how to identify them
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- Journal Article
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Integrator restrains paraspeckles assembly by promoting isoform switching of the lncRNA NEAT1
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- Conference Paper
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Towards SERS-based multiplexed monitoring of protease activity using non-natural aromatic amino acids
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Development and characterization of protein kinase B/AKT isoform-specific nanobodies
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- Conference Paper
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Waveguide-based detection of protease activity using surface-enhanced Raman spectroscopy
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SnRK2 protein kinases and mRNA decapping machinery control root development and response to salt
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- Journal Article
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Classification and nomenclature of metacaspases and paracaspases : no more confusion with caspases
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High-resolution mass spectrometry-based selection of peanut peptide biomarkers considering food processing and market type variation
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Selection of universal peptide biomarkers for the detection of the allergen hazelnut in food trough a comprehensive, high resolution mass spectrometric (HRMS) based approach
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Dehydrin ERD14 activates glutathione transferase Phi9 in Arabidopsis thaliana under osmotic stress
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- Journal Article
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N-glycosylation site analysis reveals sex-related differences in protein N-glycosylation in the rice brown planthopper (Nilaparvata lugens)
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- Journal Article
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N-terminal proteoforms in human disease
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- Journal Article
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FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes
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- Journal Article
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UBP12 and UBP13 negatively regulate the activity of the ubiquitin-dependent peptidases DA1, DAR1 and DAR2
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- Conference Paper
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Hydrogen plasma cleaning of gold plasmonic nanostructures for better reproducibility of SERS spectra
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High-throughput proteome analysis using 50 cm long micro pillar arraycolumns (µPAC)
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CYP707As are effectors of karrikin and strigolactone signalling pathways in Arabidopsis thaliana and parasitic plants
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Targeted proteomics for studying pathogenic bacteria
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Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes reveal differentially expressed proteins linked to the cell surface and pathogenicity
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Pick a tag and explore the functions of your pet protein
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A well-controlled BioID design for endogenous bait proteins
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Selection of egg peptide biomarkers in processed food products by high resolution mass spectrometry
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Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites
(2019) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 116(42). p.21256-21261 -
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Pollens destroy respiratory epithelial cell anchors and drive alphaherpesvirus infection
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Developmental plasticity at high temperature
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Comparison of free-space and waveguide-based SERS platforms
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Design and visualization of second generation cyanoisoindole based fluorescent strigolactone analogs
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Look closely, the beautiful may be small : precursor-derived peptides in plants
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Feeling the heat : searching for plant thermosensors
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- Journal Article
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Caught green-handed : methods for in vivo detection and visualization of protease activity
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- Journal Article
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Extracellular peptide Kratos restricts cell death during vascular development and stress in Arabidopsis
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Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase
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- Journal Article
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The Plant PTM Viewer, a central resource for exploring plant protein modifications
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- Miscellaneous
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Plant proteases and programmed cell death
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- Journal Article
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EXPANSIN A1-mediated radial swelling of pericycle cells positions anticlinal cell divisions during lateral root initiation
(2019) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 116(17). p.8597-8602