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- Journal Article
- open access
Benchmarking digital PCR partition classification methods with empirical and simulated duplex data
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- Journal Article
- A1
- open access
Semiparametric estimation of probabilistic index models : efficiency and bias
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- Journal Article
- A1
- open access
Determining tipping points and responses of macroinvertebrate traits to abiotic factors in support of river management
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- Journal Article
- A1
- open access
Digital PCR partition classification
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Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Conference Paper
- C3
- open access
Dramatic impact of blood collection tube and RNA purification method on extracellular RNA transcriptomes
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Statistical detection of synergy : new methods and a comparative study
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The Extracellular RNA Quality Control (exRNAQC) study (phase 1)
(2022) -
The Extracellular RNA Quality Control (exRNAQC) study (phase 2)
(2022) -
- Miscellaneous
- open access
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Journal Article
- A2
- open access
Exploring the microbiome analysis and visualization landscape
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- Journal Article
- A1
- open access
Seasonal variation in prevalence of Mycoplasma hyopneumoniae and other respiratory pathogens in peri-weaned, post-weaned, and fattening pigs with clinical signs of respiratory diseases in Belgian and Dutch pig herds, using a tracheobronchial swab sampling technique, and their associations with local weather conditions
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- Journal Article
- A1
- open access
Towards building a quantitative proteomics toolbox in precision medicine : a mini-review
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Graduate education in statistics and data science : the why, when, where, who, and what
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- Journal Article
- A1
- open access
Supplementation of a beta-mannanase enzyme reduces post-weaning diarrhea and antibiotic use in piglets on an alternative diet with additional soybean meal
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Unbiasedness and efficiency of non-parametric and UMVUE estimators of the probabilistic index and related statistics
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Development of a 3':5' digital PCR assay to determine horse mRNA integrity
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From population to subject-specific reference intervals
(2020) ICCS 2020: Computational Science. In Lecture Notes in Computer Science 12140(Part IV). p.468-482 -
- Journal Article
- A2
- open access
Model-based joint visualization of multiple compositional omics datasets
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- Journal Article
- A1
- open access
Sequence count data are poorly fit by the negative binomial distribution
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- Journal Article
- A1
- open access
SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups
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- Journal Article
- A1
- open access
On the utility of RNA sample pooling to optimize cost and statistical power in RNA sequencing experiments
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- Journal Article
- A1
- open access
SPsimSeq : semi-parametric simulation of bulk and single-cell RNA-sequencing data
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High-dimensional prediction of binary outcomes in the presence of between-study heterogeneity
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- Journal Article
- A1
- open access
A unified framework for unconstrained and constrained ordination of microbiome read count data
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- Miscellaneous
- open access
SPECS : a non-parameteric method to identify tissue-specific molecular features for unbalanced sample groups
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Semiparametric linear transformation models : effect measures, estimators and applications
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- Conference Paper
- C3
- open access
Probabilistic index models for testing differential gene expression in single-cell RNA sequencing data
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Clinical diseases in pet black-tailed prairie dogs (Cynomys ludovicianus): a retrospective study in 206 animals
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- Journal Article
- A1
- open access
A practical protocol for the experimental design of comparative studies on water treatment
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A broken promise : microbiome differential abundance methods do not control the false discovery rate
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Reducing bias in digital PCR quantification experiments : the importance of appropriate modelling of volume variability
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- Journal Article
- A1
- open access
A comprehensive overview of genomic imprinting in breast and its deregulation in cancer
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- Journal Article
- A1
- open access
Model-based analysis of increased loads on the performance of activated sludge and waste stabilization ponds
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Reducing bias in digital PCR experiments by appropriate modelling of volume variability
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- Journal Article
- A1
- open access
Use of trachea-bronchial swab qPCR testing to confirm Mycoplasma hyopneumoniae seropositivity in an SPF breeding herd
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On determining the power of digital PCR experiments
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Microbial transplant to shift a malodorous armpit microbiome
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- Journal Article
- A1
- open access
Small sample inference for probabilistic index models
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Prognostic and therapeutic implications of circulating androgen receptor gene copy number in prostate cancer patients using droplet digital polymerase chain reaction
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Confirmation of Mycoplasma hyopneumoniae in a breeding herd through tracheobronchial swab sampling and PCR
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A new approach for modeling patient overall radiosensitivity and predicting multiple toxicity endpoints for breast cancer patients
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- Journal Article
- A1
- open access
Differential gene expression analysis tools exhibit substandard performance for long non-coding RNA-sequencing data
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- Conference Paper
- C3
- open access
Differential gene expression analysis of RNA-sequencing data : evaluation of DGE tools for long non-coding RNA-sequencing data
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- Conference Paper
- C3
- open access
Probabilistic index models for testing differential gene expression in single-cell RNA-sequencing data
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Quantifying the uncertainty of a model-reconstructed soilscape for archaeological land evaluation
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- Journal Article
- A1
- open access
Statistically-Based Comparison of the Removal Efficiencies and Resilience Capacities between Conventional and Natural Wastewater Treatment Systems: A Peak Load Scenario
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- Journal Article
- A1
- open access
A closer look on spatiotemporal variations of dissolved oxygen in waste stabilization ponds using mixed models
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Model-based analysis of the relationship between macroinvertebrate traits and environmental river conditions
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Quality control of digital PCR assays and platforms
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Exhaled breath to screen for malignant pleural mesothelioma : a validation study
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Exhaled breath analysis allows exclusive screening for malignant pleural mesothelioma
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- Conference Paper
- C3
- open access
Nonparametric simulation to evaluate the performance of statistical methods for differential gene expression analysis of long non-coding RNA-seq data in cancer studies
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- Journal Article
- A1
- open access
BIGL : Biochemically Intuitive Generalized Loewe null model for prediction of the expected combined effect compatible with partial agonism and antagonism
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Assessing the fit of finite mixture distributions
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The occurrence and therapeutic consequences of androgen receptor copy number gain in prostate cancer patients using Droplet Digital PCR
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A digital PCR data analysis workflow : from sample to effective result
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- Journal Article
- A1
- open access
A unified censored normal regression model for qPCR differential gene expression analysis
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- Conference Paper
- C3
- open access
Spatiotemporal effects on oxygen level in waste stabilization pond at high altitude
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- Journal Article
- A1
- open access
Breath analysis by gas chromatography-mass spectrometry and electronic nose to screen for pleural mesothelioma : a cross-sectional case-control study
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Androgen receptor gene copy number detection using droplet digital PCR and its therapeutic consequences in prostate cancer patients
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- Journal Article
- A1
- open access
A Mann-Whitney type effect measure of interaction for factorial designs
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Modeling cage effects in microbial community in Type 1 Diabetes (T1D) mouse model using mixed effect models
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Comparing nonparametric tests of equality of means for randomized block designs
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- Journal Article
- A1
- open access
Constrained ordination analysis with enrichment of bell-shaped response functions
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Microbial invasion into drinking water-related bacterial communities
(2016) BIOSPEKTRUM. -
Pitfalls in prediction modeling for normal tissue toxicity in radiation therapy: an illustration with the individual radiation sensitivity and mammary carcinoma risk factor investigation cohorts
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- Journal Article
- A2
- open access
Flexible analysis of digital PCR experiments using generalized linear mixed models
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Threshold setting in duplex digital PCR experiments
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Microbial invasion into drinking water-related bacterial communities
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Detection of malignant pleural mesothelioma in exhaled breath by multicapillary column/ion mobility spectrometry (MCC/IMS)
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A web application for sample size and power calculation in case-control microbiome studies
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The future of digital polymerase chain reaction in virology
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Smooth tests of fit for Gaussian mixtures
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Principal bicorrelation analysis: unraveling associations between three data sources
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Extended analysis of at least partially ordered multi-factor ANOVA
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Seasonality modifies the effect of a lipid-based nutrient supplement for pregnant rural women on birth length
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- Journal Article
- A1
- open access
Using transcriptomics to guide lead optimization in drug discovery projects : lessons learned from the QSTAR project
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- Journal Article
- A1
- open access
Mining for viral fragments in methylation enriched sequencing data
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ddpcRquant: threshold determination for single channel droplet digital PCR experiments
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Robust regression methods for real-time polymerase chain reaction
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Generalized smooth tests of goodness of fit utilising L-moments
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GLMMs for nucleic acid concentration estimation in digital droplet PCR
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Extreme value theory for threshold determination in droplet digital PCR experiments
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Data analysis of droplet digital PCR with generalized linear mixed models
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- Journal Article
- A1
- open access
ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering
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VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering
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Statistical distribution models : goodness of fit tests
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- Journal Article
- A1
- open access
A regression framework for rank tests based on the probabilistic index model
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Increasing the power of the Mann-Whitney test in randomized experiments through flexible covariate adjustment
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Statistics
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Exhaled breath as diagnostic tool for malignant pleural mesothelioma
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Breath analysis by ion mobility spectrometry allows discrimination of pleural mesothelioma patients from controls
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Volatile organic compounds increase the likelihood of detecting malignant pleural mesothelioma
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Robust regression methods for real-time PCR
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ddcRquant: threshold determination for single channel droplet digital PCR experiments
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Threshold determination in droplet digital PCR experiments using extreme value theory
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Improving accuracy and precision of dPCR experiments by relying on multiple reference genes
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A proportional score test over the nuisance parameter space: properties and applications
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unifiedWMWqPCR: the unified Wilcoxon–Mann–Whitney test for analyzing RT-qPCR data in R
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- Journal Article
- A1
- open access
Comparison of the abiotic preferences of macroinvertebrates in tropical river basins
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Next-generation technologies and data analytical approaches for epigenomics
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The more, the merrier: heterotroph richness stimulates methanotrophic activity
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A breath test for diagnosing malignant pleural mesothelioma
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Calculating bivariate orthonormal polynomials by recurrence
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- Journal Article
- A1
- open access
Goodness-of-fit methods for probabilistic index models
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Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model
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Environmental conditions and community eveness determine the outcome of biological invasion
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EMLasso: logistic lasso with missing data
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An extension of the Wilcoxon-Mann-Whitney test for analyzing RT-qPCR data
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A predictive model for dysphagia following IMRT for head and neck cancer: introduction of the EMLasso technique
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Dissemination and implementation of the ARIA guidelines for allergic rhinitis in general practice
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Environmental conditions and community evenness determine the outcome of biological invasion
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Synthetic microbial communities: high throughput models to test new ecological hypothesis
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Relating taxonomy-based traits of macroinvertebrates with river sediment quality based on basic and zero-inflated Poisson models.
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Prediction of risk for prostate cancer in histopathologically negative biopsies by multigene epigenetic assay
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Flow cytometry for fast microbial community fingerprinting
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The effect of clinical covariates on the diagnostic and prognostic value of soluble mesothelin and megakaryocyte potentiating factor
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An omnibus consistent adaptive percentile modified Wilcoxon rank sum test with applications in gene expression studies
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Fast wavelet based functional models for transcriptome analysis with tiling arrays
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- Journal Article
- A1
- open access
Analysis of tiling array expression studies with flexible designs in Bioconductor (waveTiling)
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- Journal Article
- A1
- open access
Improved base-calling and quality scores for 454 sequencing based on a Hurdle Poisson model
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Biodiversity of freshwater diatom communities during 1000 years of metal mining, land use, and climate change in Central Sweden
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- Journal Article
- A2
- open access
Comparison of some tests of fit for the inverse Gaussian distribution
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Constrained ordination analysis in the presence of zero inflation
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Using orthogonal trend contrasts for testing ranked data with ordered alternatives
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Specific butyrate-producing Clostridium cluster XIVa species colonize the mucosal environment of a novel in vitro gut model
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Specific Clostridium cluster XIVa species drive the mucosal butyrate production
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The potential for adaptation in a natural Daphnia magna population: broad and narrow-sense heritability of net reproductive rate under Cd stress at two temperatures
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Flow cytometry for fast microbial community fingerprinting
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Trends in atmospheric nitrogen and sulphur deposition in northern Belgium
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Regulatory networks governed by microRNAs in T-ALL oncogenesis and normal T-cell development
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Probabilistic index models
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Development of a multicomponent prediction model for acute esophagitis in lung cancer patients receiving chemoradiotherapy
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- Conference Paper
- C3
- open access
Flow cytometry community fingerprinting to detect quickly stress in drinking water systems
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Smooth tests of goodness of fit
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- Conference Paper
- C1
- open access
Probabilistic index models
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- Conference Paper
- C3
- open access
Probabilistic index models
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Generalised smooth tests for the generalised Pareto distribution
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Reweighted smooth tests of goodness of fit
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Smooth tests for the gamma distribution
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MicroRNA expression in induced sputum of smokers and patients with chronic obstructive pulmonary disease
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Regulatory networks governed by microRNAs in T-ALL oncogenesis and normal T-cell development
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A non-parametric method to assess the presence of significant DNA-methylation in enrichment-based NGS data
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The ARIA guidelines in specialist practice : a nationwide survey
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Screening of plant secondary metabolites and their interactions on ruminal fatty acid metabolism
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Easily applied tests of fit for the Rayleigh distribution
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Four tests of fit for the beta-binomial distribution
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Accurate particle size distribution determination by nanoparticle tracking analysis based on 2-D Brownian dynamics simulation
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Smooth tests of goodness of fit based on smooth alternatives to the quantile function
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Comparing distributions
(2010) -
Constrained ordination analysis in metagenomics microbial diversity studies
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A semiparametric unified approach for the detection of differential gene expression in microarrays
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Testing for trends in the violation frequency of an environmental threshold in rivers
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Nonparametric trend detection in river monitoring network data: a spatio-temporal approach
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Data-driven smooth tests and a diagnostic tool for lack-of-fit for circular data
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Anscombe's tests of fit for the negative binomial distribution
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Generalised smooth tests of goodness of fit
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Informative statistical analyses using smooth goodness of fit tests
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Excretion of endogenous boldione in human urine: influence of phytosterol consumption
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Comments on: Goodness-of-fit tests in mixed modes: smooth tests of goodness-of-fit for the random effects distribution in linear mixed models
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Smooth tests of goodness-of-fit: using R
(2009) -
- Journal Article
- A2
- open access
Tests of fit for the logarithmic distribution
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X² and its components as tests of normality for grouped data
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Comparison of some tests of fit for the Laplace distribution
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A generalized Emerson recurrence relation
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Multiple putative oncogenes at the chromosome 20q amplicon contribute to colorectal adenoma to carcinoma progression
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Efficacy of quetiapine for impulsivity and affective symptoms in borderline personality disorder
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Tests and diagnostic plots for detecting lack-of-fit for circular-linear regression models
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Multi-method approach indicates no presence of sub-lethally injured Listeria monocytogenes cells after mild heat treatment
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Determination of water droplet size distribution in butter: pulsed field gradient NMR in comparison with confocal scanning laser microscopy
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Optimization of sewage sludge conditioning and pressure dewatering by statistical modelling
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Feasibility of isolation perimeters for genetically modified maize
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- Journal Article
- A2
- open access
A method to search for optimal field allocations of transgenic maize in the context of co-existence
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- Miscellaneous
- open access
Trendanalyse verzuring in Vlaanderen
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Forecasting the feasibility of implementing isolation perimeters between GM and non GM maize fields under agricultural conditions
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Integration of DNA and expression microarray data unravels seven putative oncogenes on 20Q amplicon involved in colorectal adenoma to carcinoma progression
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Quantitative evaluation of sewage sludge conditioning and dewatering governing factors
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Statistical thinking in computer-based learning environments
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Data management of river water quality data: a semi-automatic procedure for data validation
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Estimating and modeling spatio-temporal correlation structures for river monitoring networks
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Recommendations to facilitate the implementation of isolation perimeters
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Searching for optimal field allocations of genetically modified maize
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Implementing isolation perimeters around genetically modified maize fields
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Forecasting the feasibility of implementing isolation perimeters between GM and non-GM maize fields under agricultural conditions
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Comparison of five tests of fit for the extreme value distribution
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Goodness of fit for the zero-truncated Poisson distribution
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- Miscellaneous
- open access
Statistische verwerking meetdata verzuring: eindverslag februari 2007
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Search for potential plant extracts in the prevention/treatment of dental caries in animals: GTF inhibition is a poor predictor of biofilm inhibition by plant extracts
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Rheological properties of dairy desserts containing iota-carrageenan and maize starch
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Spatial impact of isolation distances between parcels of GM and non-GM maize
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Regional residual plots for assessing the fit of linear regression models
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Spatio-temporal statistical models for river monitoring networks
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Interactions between κ-carrageenan, milk proteins and modified starch in sterilized dairy desserts
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Nonparametric trend detection in spatio-temporal river monitoring networks
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Influence of polyelectrolyte characteristics on pressure-driven activated sludge dewatering
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Tests for symmetry based on the one-sample Wilcoxon signed rank statistic
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Smooth tests for the zero-inflated poisson distribution
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More informative testing for bivariate symmetry
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New composite index based on midlatency auditory evoked potential and electroencephalographic parameters to optimize correlation with propofol effect site concentration: comparison with bispectral index and solitary used fast extracting auditory evoked potential index
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Correcting standard errors in two-stage estimation procedures with generated regressands
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Spatio-temporal river monitoring network modelling
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A comparison between bispectral index and three versions of the A-line auditory evoked potential to predict a calculated propofol effect-site concentration during a transition from fully awake to maxial burst suppression
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Influence of chemical composition on the isothermal cocoa butter crystallization
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- Conference Paper
- C1
- open access
Influence of chemical composition on the isothermal cocoa butter crystallization
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Towards a better understanding in acrylamide formation, degradation and reduction in model systems (and foodstuffs)
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Spectral entropy as an electroennopbalograpbic measure of anesthetic drug effect: a comparison with bispectral index and precessed midlatency auditory evoked response
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Textural properties of gelled dairy desserts containing κ-carrageenan and starch
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A nonparametric test for independence based on sample space partitions
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An extension of the Anderson-Darling k-sample test to arbitrary sample space partition sizes
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Spatio-Temporal Statistical Models for River Monitoring Networks
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Some generalizations of the Anderson-Darling statistic
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More informative new nonparametric testing for important experimental designs
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Four-dimensional imaging and computer-assisted track analysis of nuclear migration in root hairs of Arabidopsis thaliana
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Mixture design approach on the dynamic rheological and uniaxial compression behaviour of milk desserts
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Interaction between Podisus maculiventris and Harmonia axyridis, two predators used in augmentative biological control in greenhouse crops
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Statistical validation of water quality data
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Limitations of current probabilistic risk calculation methods
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Rheological properties of gelled dairy desserts as influenced by composition
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Determination of the refractive index of water-dispersible granules for use in laser diffraction experiments
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Accounting for hierarchical variability in species sensitivity distributions
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Probabilistic ecological risk assessment framework for chemical substances.
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Added value of a (hierarchical) bootstrap model in environmental standard setting
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Influence of pesticide information sources on citrus farmers' knowledge, perception and practices in pest management, Mekong Delta, Vietnam
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Applets for Experimenting with Statistical Concepts
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On the link between EDF and smooth goodness-of-fit tests
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- Journal Article
- A2
- open access
Goodness-of-fit tests based on sample space partitions : a unifying overview
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On the Link between EDF and Smooth GOF tests
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Regional residual plots for assessing the fit of multiple linear regression models
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How to estimate moments and quantiles of environmental data sets with non-detected observations?: a case study on volatile organic compounds in marine water samples
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Comparing telomere length of sister chromatids in human lymphocytes using three dimensional confocal microscopy
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Determination of the refractive index of water dispersable granules through differential refractometry and its influence in laser diffraction experiments
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Determining the refractive index of organic particles for use in laser light scattering measurements
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Probabilstic environmental risk assessment.
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Goodness-of-fit Tests Based on Sample Space Partitions: an Overview.
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A data-driven non-parametric test for component-wise independence based on sample space partitions
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Probabilistic environmental risk assessment
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Determining environmental standards using bootstrapping, Bayesian and maximum likelihood techniques: a comparative study
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Characterising inter-laboratory variability in environmental standard setting using weighted hierarchical bootstrapping
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- PhD Thesis
- open access
Nonparametrical tests based on sample space partitions
(2001) -
Uncertainty techniques in environmental risk assissment
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A collection of applets for visualising statistical concepts
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Evaluation of sampling frequency for the water quality monitoring network of coastal Galicia (northwest Spain), J.M. Antelo, F. Arce, J.L. Carballeira, 70, 1327 (1998) : discussion
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An approach to intervention analysis in spatio-temporal modelling of river quality
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The sample space partition resampling method: a nonparametric test for independence between both continuous and discrete variables
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Spatio-temporal modelling for intervention analysis in river monitoring networks: a case study
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A nonparametric test for independence: a sample space partition resampling approach
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The modelling of noise processes in stochastic differential equations : application to biotechnological processes
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Integrating properties of soil map delineations into ordinary kriging