Ghent University Academic Bibliography

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OMEN : network-based driver gene identification using mutual exclusivity

Dries Van Daele, Bram Weytjens (UGent) , Luc De Raedt and Kathleen Marchal (UGent)

(2022) BIOINFORMATICS. 38(12). p.3245-3251
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- Journal Article
- A1
- open access
Image-based dynamic phenotyping reveals genetic determinants of filamentation-mediated beta-lactam tolerance

Taiyeb Zahir, Dorien Wilmaerts, Sabine Franke, Bram Weytjens (UGent) , Rafael Camacho, Kathleen Marchal (UGent) , Johan Hofkens, Maarten Fauvart and Jan Michielsen

(2020) FRONTIERS IN MICROBIOLOGY. 11.
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- Journal Article
- A1
- open access
IAMBEE : a web-service for the identification of adaptive pathways from parallel evolved clonal populations

Camilo Andrés Pérez Romero (UGent) , Bram Weytjens (UGent) , Dries Decap (UGent) , Toon Swings, Jan Michiels, Dries De Maeyer (UGent) and Kathleen Marchal (UGent)

(2019) NUCLEIC ACIDS RESEARCH. 47(W1). p.W151-W157
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- Journal Article
- A1
- open access
Molecular processes underlying synergistic linuron mineralization in a triple-species bacterial consortium biofilm revealed by differential transcriptomics

Pieter Albers, Bram Weytjens (UGent) , René De Mot, Kathleen Marchal (UGent) and Dirk Springael

(2018) MICROBIOLOGYOPEN. 7(2).
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- Journal Article
- A1
- open access
1-((2,4-Dichlorophenethyl)amino)3-phenoxypropan-2-ol kills Pseudomonas aeruginosa through extensive membrane damage

Valerie Defraine, Veerle Liebens, Evelien Loos, Toon Swings, Bram Weytjens, Carolina Fierro, Kathleen Marchal (UGent) , Liam Sharkey, Alex J O'Neill, Romu Corbau, et al.

(2018) FRONTIERS IN MICROBIOLOGY. 9.
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- PhD Thesis
- open access
Network-based identification of driver pathways in clonal systems

Bram Weytjens (UGent)

(2017)
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- Journal Article
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Network-based identification of adaptive pathways in evolved ethanol-tolerant bacterial populations

Toon Swings, Bram Weytjens (UGent) , Thomas Schalck, Camille Bonte, Natalie Verstraeten, Jan Michiels and Kathleen Marchal (UGent)

(2017) MOLECULAR BIOLOGY AND EVOLUTION. 34(11). p.2927-2943
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- Journal Article
- A1
- open access
SSA-ME Detection of cancer driver genes using mutual exclusivity by small subnetwork analysis

Sergio Pulido Tamayo (UGent) , Bram Weytjens (UGent) , Dries De Maeyer (UGent) and Kathleen Marchal (UGent)

(2016) SCIENTIFIC REPORTS. 6.
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- Journal Article
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Network-based analysis of eQTL data to prioritize driver mutations

Dries De Maeyer (UGent) , Bram Weytjens (UGent) , Luc De Raedt and Kathleen Marchal (UGent)

(2016) GENOME BIOLOGY AND EVOLUTION. 8(3). p.481-494
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- Journal Article
- A1
- open access
Elucidation of the mode of action of a new antibacterial compound active against Staphylococcus aureus and Pseudomonas aeruginosa

Evelien Gerits, Eline Blommaert, Anna Lippell, Alex J O'Neill, Bram Weytjens, Dries De Maeyer, Ana Carolina Fierro, Kathleen Marchal (UGent) , Arnaud Marchand, Patrick Chaltin, et al.

(2016) PLOS ONE. 11(5).

Academic Bibliography

OMEN : network-based driver gene identification using mutual exclusivity

Image-based dynamic phenotyping reveals genetic determinants of filamentation-mediated beta-lactam tolerance

IAMBEE : a web-service for the identification of adaptive pathways from parallel evolved clonal populations

Molecular processes underlying synergistic linuron mineralization in a triple-species bacterial consortium biofilm revealed by differential transcriptomics

1-((2,4-Dichlorophenethyl)amino)3-phenoxypropan-2-ol kills Pseudomonas aeruginosa through extensive membrane damage

Network-based identification of driver pathways in clonal systems

Network-based identification of adaptive pathways in evolved ethanol-tolerant bacterial populations

SSA-ME Detection of cancer driver genes using mutual exclusivity by small subnetwork analysis

Network-based analysis of eQTL data to prioritize driver mutations

Elucidation of the mode of action of a new antibacterial compound active against Staphylococcus aureus and Pseudomonas aeruginosa

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