Ghent University Academic Bibliography

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Shedding light on black boxes in protein identification

Marc Vaudel (UGent) , A Saskia Venne, Frode S Berven, René P Zahedi, Lennart Martens (UGent) and Harald Barsnes (UGent)

(2014) PROTEOMICS. 14(9). p.1001-1005
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Time-resolved characterization of cAMP/PKA-dependent signaling reveals that platelet inhibition is a concerted process involving multiple signaling pathways

Florian Beck, Jörg Geiger, Stepan Gambaryan, Johannes Veit, Marc Vaudel, Peter Nollau, Oliver Kohlbacher, Lennart Martens (UGent) , Ulrich Walter, Albert Sickmann, et al.

(2014) BLOOD. 123(5). p.e1-e10
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DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra

Thilo Muth, Lisa Weilnböck, Erdmann Rapp, Christian G Huber, Lennart Martens (UGent) , Marc Vaudel and Harald Barsnes

(2014) JOURNAL OF PROTEOME RESEARCH. 13(2). p.1143-1146
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- Journal Article
- A1
- open access
Introduction to opportunities and pitfalls in functional mass spectrometry based proteomics

Marc Vaudel, Albert Sickmann and Lennart Martens (UGent)

(2014) BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. 1844(1A). p.12-20
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D-score: a search engine independent MD-score

Marc Vaudel (UGent) , Daniela Breiter, Florian Beck, Jörg Rahnenführer, Lennart Martens (UGent) and René P Zahedi

(2013) PROTEOMICS. 13(6). p.1036-1041
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The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional pathways

Julia M Burkhart, Marc Vaudel (UGent) , Stepan Gambaryan, Sonja Radau, Ulrich Walter, Lennart Martens (UGent) , Jörg Geiger, Albert Sickmann and René P Zahedi

(2012) BLOOD. 120(15). p.E73-E82
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Current methods for global proteome identification

Marc Vaudel, Albert Sickmann and Lennart Martens (UGent)

(2012) EXPERT REVIEW OF PROTEOMICS. 9(5). p.519-532
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A complex standard for protein identification, designed by evolution

Marc Vaudel, Julia M Burkhart, Daniela Breiter, René P Zahedi, Albert Sickmann and Lennart Martens (UGent)

(2012) JOURNAL OF PROTEOME RESEARCH. 11(10). p.5065-5071
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- PhD Thesis
Detailed analysis of the blood platelet proteome through the use of innovative bioinformatics methods for protein identification, quantification and post-translational modification localization

Marc Vaudel (UGent)

(2012)
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- Book Chapter
iTRAQ data interpretation

Marc Vaudel, Julia Maria Burkhart, René Peiman Zahedi, Lennart Martens (UGent) and Albert Sickmann

(2012) Quantitative methods in proteomics. In Methods in Molecular Biology 893. p.501-509

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Academic Bibliography

Shedding light on black boxes in protein identification

Time-resolved characterization of cAMP/PKA-dependent signaling reveals that platelet inhibition is a concerted process involving multiple signaling pathways

DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra

Introduction to opportunities and pitfalls in functional mass spectrometry based proteomics

D-score: a search engine independent MD-score

The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional pathways

Current methods for global proteome identification

A complex standard for protein identification, designed by evolution

Detailed analysis of the blood platelet proteome through the use of innovative bioinformatics methods for protein identification, quantification and post-translational modification localization

iTRAQ data interpretation

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