Ghent University Academic Bibliography

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Identification of the source for salmonella contamination of carcasses in a large pig slaughterhouse

Hang Zeng (UGent) , Geertrui Rasschaert, Lieven De Zutter (UGent) , Wesley Mattheus and Koen De Reu

(2021) PATHOGENS. 10(1).
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Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation

Bert Bogaerts (UGent) , Raf Winand, Julien Van Braekel, Wesley Mattheus, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kathleen Marchal (UGent) , Kevin Vanneste and Pieter-Jan Ceyssens

(2021) MICROORGANISMS. 9(4).
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Prevalence, antimicrobial resistance, and molecular characterization of salmonella in cattle, beef, and diarrheic patients in Bishoftu, Ethiopia

Fanta Desissa Gutema, Geertrui Rasschaert, Getahun E. Agga, Olana Merera, Addisu B. Duguma, Reta D. Abdi, Luc Duchateau (UGent) , Wesley Mattheus, Sarah Gabriël (UGent) and Lieven De Zutter (UGent)

(2021) FOODBORNE PATHOGENS AND DISEASE. 18(4). p.283-289
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Assessment of beef carcass contamination with Salmonella and E. coli O 157 in slaughterhouses in Bishoftu, Ethiopia

Fanta Desissa Gutema, Reta D. Abdi, Getahun E. Agga, Seyoum Firew, Geertrui Rasschaert, Wesley Mattheus, Florence Crombe, Luc Duchateau (UGent) , Sarah Gabriël (UGent) and Lieven De Zutter (UGent)

(2021) International Journal of Food Contamination. 8(3).
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Application of a strain- level shotgun metagenomics approach on food samples : resolution of the source of a Salmonella food-borne outbreak

Florence Buytaers (UGent) , Assia Saltykova (UGent) , Wesley Mattheus, Valeska Laisnez, Bavo Verhaegen, Nancy H. C. Roosens, Kevin Vanneste (UGent) , Naiima Hammami, Brigitte Pochet, Vera Cantaert, et al.

(2021) MICROBIAL GENOMICS. 7(4).
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A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

Mathieu Gand, Wesley Mattheus, Nancy HC Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sigrid CJ De Keersmaecker and Sophie Bertrand

(2020) FOOD MICROBIOLOGY. 87.
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A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium

Mathieu Gand, Wesley Mattheus, Nancy Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sophie Bertrand and Sigrid C. J. De Keersmaecker

(2020) FOOD MICROBIOLOGY. 91.
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Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing : Neisseria meningitidis as a proof of concept

Assia Saltykova (UGent) , Wesley Mattheus, Sophie Bertrand, Nancy HC Roosens, Kathleen Marchal (UGent) and Sigrid CJ De Keersmaecker

(2019) FRONTIERS IN MICROBIOLOGY. 10.
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Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java

Mathieu Gand, Wesley Mattheus, Assia Saltykova, Nancy Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sigrid C. J. De Keersmaecker and Sophie Bertrand

(2019) APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 103(12). p.4987-4996
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Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

Bert Bogaerts (UGent) , Raf Winand, Qiang Fu, Julien Van Braekel, Pieter-Jan Ceyssens, Wesley Mattheus, Sophie Bertrand, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2019) FRONTIERS IN MICROBIOLOGY. 10.

Academic Bibliography

Identification of the source for salmonella contamination of carcasses in a large pig slaughterhouse

Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation

Prevalence, antimicrobial resistance, and molecular characterization of salmonella in cattle, beef, and diarrheic patients in Bishoftu, Ethiopia

Assessment of beef carcass contamination with Salmonella and E. coli O 157 in slaughterhouses in Bishoftu, Ethiopia

Application of a strain- level shotgun metagenomics approach on food samples : resolution of the source of a Salmonella food-borne outbreak

A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium

Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing : Neisseria meningitidis as a proof of concept

Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java

Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

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