Ghent University Academic Bibliography

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Inference of ancient polyploidy using transcriptome data

Jia Li (UGent) , Yves Van de Peer (UGent) and Zhen Li (UGent)

(2023) Polyploidy : methods and protocols. In Methods in Molecular Biology 2545. p.47-76
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Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants

Yichun Qiu, Zhen Li (UGent) , Dirk Walther and Claudia Köhler

(2023) MOLECULAR BIOLOGY AND EVOLUTION. 40(9).
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Revisiting ancient polyploidy in leptosporangiate ferns

Hengchi Chen (UGent) , Yuhan Fang, Arthur Zwaenepoel (UGent) , Sanwen Huang, Yves Van de Peer (UGent) and Zhen Li (UGent)

(2023) NEW PHYTOLOGIST. 237(4). p.1405-1417
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The genome of the king protea, Protea cynaroides

Jiyang Chang (UGent) , Tuan A. Duong, Cassandra Schoeman, Xiao Ma (UGent) , Danielle Roodt, Nigel Barker, Zhen Li (UGent) , Yves Van de Peer (UGent) and Eshchar Mizrachi

(2023) PLANT JOURNAL. 113(2). p.262-276
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The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids

Jia‐Yu Xue, Zhen Li (UGent) , Shuai‐Ya Hu, Shu-Min Kao, Tao Zhao, Jie‐Yu Wang, Yue Wang, Min Chen, Yichun Qiu, Hai‐Yun Fan, et al.

(2023) PLANT JOURNAL. 113. p.1021-1034
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Chromosome-level genomes of three key Allium crops and their trait evolution

Fei Hao, Xue Liu, Botong Zhou, Zunzhe Tian, Lina Zhou, Hang Zong, Jiyan Qi, Juan He, Yongting Zhang, Peng Zeng, et al.

(2023) Nature Genetics. 55(11). p.1976-1986
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Diploid and tetraploid genomes of Acorus and the evolution of monocots

Liang Ma, Ke-Wei Liu, Zhen Li (UGent) , Yu-Yun Hsiao, Yiying Qi, Tao Fu, Guang-Da Tang, Diyang Zhang, Wei-Hong Sun, Ding-Kun Liu, et al.

(2023) NATURE COMMUNICATIONS. 14(1).
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Divergence of active site motifs among different classes of Populus glutaredoxins results in substrate switches

Hui Xu, Zhen Li (UGent) , Peng‐Fei Jiang, Li Zhao, Chang Qu, Yves Van de Peer (UGent) , Yan‐Jing Liu and Qing‐Yin Zeng

(2022) PLANT JOURNAL. 110(1). p.129-146
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The Larix kaempferi genome reveals new insights into wood properties

Chao Sun, Yun‐hui Xie, Zhen Li (UGent) , Yan‐jing Liu, Xiao‐mei Sun, Jing‐jing Li, Wei‐peng Quan, Qing‐yin Zeng, Yves Van de Peer (UGent) and Shou‐gong Zhang

(2022) JOURNAL OF INTEGRATIVE PLANT BIOLOGY. 64(7). p.1364-1373
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The genome of Corydalis reveals the evolution of benzylisoquinoline alkaloid biosynthesis in Ranunculales

Zhichao Xu, Zhen Li (UGent) , Fengming Ren, Ranran Gao, Zhe Wang, Jinlan Zhang, Tao Zhao, Xiao Ma (UGent) , Xiangdong Pu, Tianyi Xin, et al.

(2022) PLANT JOURNAL. 111(1). p.217-230

Academic Bibliography

Inference of ancient polyploidy using transcriptome data

Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants

Revisiting ancient polyploidy in leptosporangiate ferns

The genome of the king protea, Protea cynaroides

The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids

Chromosome-level genomes of three key Allium crops and their trait evolution

Diploid and tetraploid genomes of Acorus and the evolution of monocots

Divergence of active site motifs among different classes of Populus glutaredoxins results in substrate switches

The Larix kaempferi genome reveals new insights into wood properties

The genome of Corydalis reveals the evolution of benzylisoquinoline alkaloid biosynthesis in Ranunculales

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