Ghent University Academic Bibliography

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Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

Alexander A. Aksenov, Ivan Laponogov, Zheng Zhang, Sophie L. F. Doran, Ilaria Belluomo, Dennis Veselkov, Wout Bittremieux, Louis Felix Nothias, Melissa Nothias-Esposito, Katherine N. Maloney, et al.

(2021) NATURE BIOTECHNOLOGY. 39(2). p.169-173
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Large-scale association analyses identify host factors influencing human gut microbiome composition

Alexander Kurilshikov, Carolina Medina-Gomez, Rodrigo Bacigalupe, Djawad Radjabzadeh, Jun Wang, Ayse Demirkan, Caroline I. Le Roy, Juan Antonio Raygoza Garay, Casey T. Finnicum, Xingrong Liu, et al.

(2021) NATURE GENETICS. 53(2). p.156-165
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- Journal Article
- A1
- open access
IL-4R alpha blockade by dupilumab decreases Staphylococcus aureus colonization and increases microbial diversity in atopic dermatitis

Chris Callewaert (UGent) , Teruaki Nakatsuji, Rob Knight, Tomasz Kosciolek, Alison Vrbanac, Paul Kotol, Marius Ardeleanu, Thomas Hultsch, Emma Guttman-Yassky, Robert Bissonnette, et al.

(2020) JOURNAL OF INVESTIGATIVE DERMATOLOGY. 140(1). p.191-202.e7
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Home chemical and microbial transitions across urbanization

Laura-Isobel McCall, Chris Callewaert (UGent) , Qiyun Zhu, Se Jin Song, Amina Bouslimani, Jeremiah J. Minich, Madeleine Ernst, Jean F. Ruiz-Calderon, Humberto Cavallin, Henrique S. Pereira, et al.

(2020) NATURE MICROBIOLOGY. 5(1). p.108-115
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- Miscellaneous
- open access
Algorithmic learning for auto-deconvolution of GC-MS data to enable molecular networking within GNPS

Alexander A. Aksenov, Ivan Laponogov, Zheng Zhang, Sophie LF Doran, Ilaria Belluomo, Dennis Veselkov, Wout Bittremieux, Louis Felix Nothias, Mélissa Nothias-Esposito, Katherine N. Maloney, et al.

(2020) bioRxiv.
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- Journal Article
- A1
- open access
A microbiome-based index for assessing skin health and treatment effects for atopic dermatitis in children

Zheng Sun, Shi Huang, Pengfei Zhu, Feng Yue, Helen Zhao, Ming Yang, Yueqing Niu, Gongchao Jing, Xiaoquan Su, Huiying Li, et al.

(2019) MSYSTEMS. 4(4).
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The impact of skin care products on skin chemistry and microbiome dynamics

Amina Bouslimani, Ricardo da Silva, Tomasz Kosciolek, Stefan Janssen, Chris Callewaert (UGent) , Amnon Amir, Kathleen Dorrestein, Alexey V. Melnik, Livia S. Zaramela, Ji-Nu Kim, et al.

(2019) BMC BIOLOGY. 17.
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Impacts of the human gut microbiome on therapeutics

Yoshiki Vazquez-Baeza, Chris Callewaert (UGent) , Justine Debelius, Embriette Hyde, Clarisse Marotz, James T. Morton, Austin Swafford, Alison Vrbanac, Pieter C. Dorrestein and Rob Knight

(2018) ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY. 58. p.253-270
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Microbial transplant to shift a malodorous armpit microbiome

Chris Callewaert (UGent) , Frederiek-Maarten Kerckhof (UGent) , Thomas Van Keer, Murielle Meunier (UGent) , Tess Plaquet (UGent) , Stijn Hawinkel (UGent) , Maarten Aerts, Peter Vandamme (UGent) , Emma Hernandez Sanabria (UGent) , Jon Sanders, et al.

(2018) Proceedings of the Pacific Division of the American Association for the Advancements of Science (AAAS). p.126-126
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Best practices for analysing microbiomes

Rob Knight, Alison Vrbanac, Bryn C. Taylor, Alexander Aksenov, Chris Callewaert (UGent) , Justine Debelius, Antonio Gonzalez, Tomasz Kosciolek, Laura-Isobel McCall, Daniel McDonald, et al.

(2018) NATURE REVIEWS MICROBIOLOGY. 16(7). p.410-422

Academic Bibliography

Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

Large-scale association analyses identify host factors influencing human gut microbiome composition

IL-4R alpha blockade by dupilumab decreases Staphylococcus aureus colonization and increases microbial diversity in atopic dermatitis

Home chemical and microbial transitions across urbanization

Algorithmic learning for auto-deconvolution of GC-MS data to enable molecular networking within GNPS

A microbiome-based index for assessing skin health and treatment effects for atopic dermatitis in children

The impact of skin care products on skin chemistry and microbiome dynamics

Impacts of the human gut microbiome on therapeutics

Microbial transplant to shift a malodorous armpit microbiome

Best practices for analysing microbiomes

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