Ghent University Academic Bibliography

Your filters: cql: author="Hirschler, Aurelie" or (type any "bookEditor issueEditor" and editor="Hirschler, Aurelie")

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The Escherichia coli PeptideAtlas build : characterizing the observed Escherichia coli pan-proteome and its post-translational modifications

Caroline Jachmann (UGent) , Zhi Sun, Kevin Velghe (UGent) , Florence Arsène-Ploetze, Aurélie Hirschler, Jasper Zuallaert (UGent) , Christine Carapito, Robbin Bouwmeester (UGent) , Kay Nieselt, Eric W. Deutsch, et al.

(2026) JOURNAL OF PROTEOME RESEARCH. 25(2). p.1027-1041
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TIMS2Rescore : a data dependent acquisition-parallel accumulation and serial fragmentation-optimized data-driven rescoring pipeline based on MS2Rescore

Arthur Declercq (UGent) , Robbe Devreese (UGent) , Jonas Scheid, Caroline Jachmann (UGent) , Tim Van Den Bossche (UGent) , Annica Preikschat, David Gomez-Zepeda, Jeewan Babu Rijal, Aurelie Hirschler, Jonathan R. Krieger, et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(3). p.1067-1076
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Thunder-DDA-PASEF enables high-coverage immunopeptidomics and is boosted by MS2Rescore with MS2PIP timsTOF fragmentation prediction model

David Gomez-Zepeda, Danielle Arnold-Schild, Julian Beyrle, Arthur Declercq (UGent) , Ralf Gabriels (UGent) , Elena Kumm, Annica Preikschat, Mateusz Krzysztof Łącki, Aurélie Hirschler, Jeewan Babu Rijal, et al.

(2024) NATURE COMMUNICATIONS. 15.
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Brain exposure to SARS-CoV-2 virions perturbs synaptic homeostasis

Emma Partiot, Aurélie Hirschler, Sophie Colomb, Willy Lutz, Tine Claeys (UGent) , François Delalande, Maika S. Deffieu, Yonis Bare, Judith R. E. Roels, Barbara Gorda, et al.

(2024) NATURE MICROBIOLOGY. 9(5). p.1189-1206
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MS2Rescore : data-driven rescoring dramatically boosts immunopeptide identification rates

Arthur Declercq (UGent) , Robbin Bouwmeester (UGent) , Aurélie Hirschler, Christine Carapito, Sven Degroeve (UGent) , Lennart Martens (UGent) and Ralf Gabriels (UGent)

(2022) MOLECULAR & CELLULAR PROTEOMICS. 21(8).

Academic Bibliography

The Escherichia coli PeptideAtlas build : characterizing the observed Escherichia coli pan-proteome and its post-translational modifications

TIMS2Rescore : a data dependent acquisition-parallel accumulation and serial fragmentation-optimized data-driven rescoring pipeline based on MS2Rescore

Thunder-DDA-PASEF enables high-coverage immunopeptidomics and is boosted by MS2Rescore with MS2PIP timsTOF fragmentation prediction model

Brain exposure to SARS-CoV-2 virions perturbs synaptic homeostasis

MS2Rescore : data-driven rescoring dramatically boosts immunopeptide identification rates

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