Ghent University Academic Bibliography

Your filters: cql: author="Grüning, Björn" or (type any "bookEditor issueEditor" and editor="Grüning, Björn")

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Galaxy Training : a powerful framework for teaching!

Saskia Hiltemann, Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg, Pratik D. Jagtap, Thomas Wollmann, Anthony Bretaudeau, Nadia Goué, et al.

(2023) PLOS COMPUTATIONAL BIOLOGY. 19(1).
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Galaxy : a decade of realising CWFR concepts

Beatriz Serrano-Solano, Anne Fouilloux, Ignacio Eguinoa (UGent) , Matúš Kalaš, Björn Grüning and Frederik Coppens (UGent)

(2022) DATA INTELLIGENCE. 4(2). p.358-371
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- Miscellaneous
- open access
Ten simple rules for making a software tool workflow-ready

Paul Brack, Peter Crowther, Stian Soiland-Reyes, Stuart Owen, Douglas Lowe, Alan R. Williams, Quentin Groom, Mathias Dillen, Frederik Coppens (UGent) , Björn Grüning, et al.

(2022) PLOS COMPUTATIONAL BIOLOGY. 18(3).
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Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens (UGent) , José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, et al.

(2022) DATA SCIENCE. 5(2). p.97-138
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Expanding the Galaxy’s reference data

Nagampalli VijayKrishna, Jayadev Joshi, Nate Coraor, Jennifer Hillman-Jackson, Dave Bouvier, Marius van den Beek, Ignacio Eguinoa (UGent) , Frederik Coppens (UGent) , John Davis, Michał Stolarczyk, et al.

(2022) BIOINFORMATICS ADVANCES. 2(1).
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A SARS-CoV-2 sequence submission tool for the European Nucleotide Archive

Miguel Roncoroni (UGent) , Bert Droesbeke (UGent) , Ignacio Eguinoa (UGent) , Kim De Ruyck (UGent) , Flora D'Anna (UGent) , Dilmurat Yusuf, Björn Grüning, Rolf Backofen and Frederik Coppens (UGent)

(2021) BIOINFORMATICS. 37(21). p.3983-3985
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Ready-to-use public infrastructure for global SARS-CoV-2 monitoring

Wolfgang Maier, Simon Bray, Marius van den Beek, Dave Bouvier, Nathan Coraor, Milad Miladi, Babita Singh, Jordi Rambla De Argila, Dannon Baker, Nathan Roach, et al.

(2021) NATURE BIOTECHNOLOGY. 39. p.1178-1179
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A proteomics sample metadata representation for multiomics integration and big data analysis

Chengxin Dai, Anja Füllgrabe, Julianus Pfeuffer, Elizaveta M. Solovyeva, Jingwen Deng, Pablo Moreno, Selvakumar Kamatchinathan, Deepti Jaiswal Kundu, Nancy George, Silvie Fexova, et al.

(2021) NATURE COMMUNICATIONS. 12(1).
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No more business as usual : agile and effective responses to emerging pathogen threats require open data and open analytics

Dannon Baker, Marius van den Beek, Daniel Blankenberg, Dave Bouvier, John Chilton, Nate Coraor, Frederik Coppens (UGent) , Ignacio Eguinoa (UGent) , Simon Gladman, Björn Grüning, et al.

(2020) PLOS PATHOGENS. 16(8).
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An accessible proteogenomics informatics resource for cancer researchers

Matthew C Chambers, Pratik D Jagtap, James E Johnson, Thomas McGowan, Praveen Kumar, Getiria Onsongo, Candace R Guerrero, Harald Barsnes, Marc Vaudel, Lennart Martens (UGent) , et al.

(2017) CANCER RESEARCH. 77(21). p.e43-e46

Academic Bibliography

Galaxy Training : a powerful framework for teaching!

Galaxy : a decade of realising CWFR concepts

Ten simple rules for making a software tool workflow-ready

Packaging research artefacts with RO-Crate

Expanding the Galaxy’s reference data

A SARS-CoV-2 sequence submission tool for the European Nucleotide Archive

Ready-to-use public infrastructure for global SARS-CoV-2 monitoring

A proteomics sample metadata representation for multiomics integration and big data analysis

No more business as usual : agile and effective responses to emerging pathogen threats require open data and open analytics

An accessible proteogenomics informatics resource for cancer researchers

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