Ghent University Academic Bibliography

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Metagenomics-based tracing of genetically modified microorganism contaminations in commercial fermentation products

Jolien D’aes, Marie-Alice Fraiture, Bert Bogaerts, Yari Van Laere (UGent) , Sigrid C.J. De Keersmaecker, Nancy H.C. Roosens and Kevin Vanneste

(2025) FOOD CHEMISTRY: MOLECULAR SCIENCES. 10.
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Assessing the authenticity and purity of a commercial Bacillus thuringiensis bioinsecticide through whole genome sequencing and metagenomics approaches

Yari Van Laere (UGent) , Marie-Alice Fraiture, Andrea Gobbo, Sigrid C. J. De Keersmaecker, Kathleen Marchal (UGent) , Nancy H. C. Roosens and Kevin Vanneste

(2025) FRONTIERS IN MICROBIOLOGY. 16.
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Whole-genome sequencing-based phylogenomic investigation of unexpected Bacillus cereus contaminations collected from commercial vitamin B2 food and feed additives sold on the Belgian market

Bert Bogaerts, Marie-Alice Fraiture, Astrid Huwaert, Tom Van Nieuwenhuysen, Bram Jacobs (UGent) , Koenraad Van Hoorde, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2023) 9th Applied Bioinformatics and Public Health Microbiology, Abstracts.
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Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing

Bert Bogaerts, Marie-Alice Fraiture, Astrid Huwaert, Tom Van Nieuwenhuysen, Bram Jacobs (UGent) , Koenraad Van Hoorde, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2023) FRONTIERS IN MICROBIOLOGY. 14.
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Food Enzyme Database (FEDA) : a web application gathering information about food enzyme preparations available on the European market

Marie Deckers, Julien Van Braeckel, Kevin Vanneste, Dieter Deforce (UGent) , Marie-Alice Fraiture and Nancy H. C. Roosens

(2021) DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
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Characterization of genetically modified microorganisms using short- and long-read whole-genome sequencing reveals contaminations of related origin in multiple commercial food enzyme products

Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2021) FOODS. 10(11).
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A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products

Florence E. Buytaers, Marie-Alice Fraiture, Bas Berbers, Els Vandermassen, Stefan Hoffman, Nina Papazova, Kevin Vanneste, Kathleen Marchal (UGent) , Nancy H. C. Roosens and Sigrid C. J. De Keersmaecker

(2021) FOOD CHEMISTRY: MOLECULAR SCIENCES. 2.
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Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing

Marie-Alice Fraiture, Bert Bogaerts, Raf Winand, Marie Deckers, Nina Papazova, Kevin Vanneste, Sigrid C. J. De Keersmaecker and Nancy H. C. Roosens

(2020) SCIENTIFIC REPORTS. 10(1).
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Strategy for the identification of micro-organisms producing food and feed products : bacteria producing food enzymes as study case

Marie Deckers, Kevin Vanneste, Raf Winand, Sigrid C. J. De Keersmaecker, Sarah Denayer, Marc Heyndrickx (UGent) , Dieter Deforce (UGent) , Marie-Alice Fraiture and Nancy H. C. Roosens

(2020) FOOD CHEMISTRY. 305.
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An integrated strategy combining DNA walking and NGS to detect GMO

Marie-Alice Fraiture (UGent) , Philippe Herman, Nina Papazova, Marc De Loose (UGent) , Dieter Deforce (UGent) , Tom Ruttink (UGent) and Nancy Roosens

(2017) FOOD CHEMISTRY. 232. p.351-358

Academic Bibliography

Metagenomics-based tracing of genetically modified microorganism contaminations in commercial fermentation products

Assessing the authenticity and purity of a commercial Bacillus thuringiensis bioinsecticide through whole genome sequencing and metagenomics approaches

Whole-genome sequencing-based phylogenomic investigation of unexpected Bacillus cereus contaminations collected from commercial vitamin B2 food and feed additives sold on the Belgian market

Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing

Food Enzyme Database (FEDA) : a web application gathering information about food enzyme preparations available on the European market

Characterization of genetically modified microorganisms using short- and long-read whole-genome sequencing reveals contaminations of related origin in multiple commercial food enzyme products

A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products

Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing

Strategy for the identification of micro-organisms producing food and feed products : bacteria producing food enzymes as study case

An integrated strategy combining DNA walking and NGS to detect GMO

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