Ghent University Academic Bibliography

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How does co-occurrence of Daphnia species affect their gut microbiome?

Shira Houwenhuyse (UGent) , François Massol, Emilie Macke, Luc De Meester, Isabel Vanoverberghe, Robby Stoks and Ellen Decaestecker

(2025) OIKOS. 2025(3).
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The effect of hypoxia on Daphnia magna performance and its associated microbial and bacterioplankton community : a scope for phenotypic plasticity and microbiome community interactions upon environmental stress?

Manon Coone, Isabel Vanoverberghe, Shira Houwenhuyse (UGent) , Chris Verslype and Ellen Decaestecker

(2023) FRONTIERS IN ECOLOGY AND EVOLUTION. 11.
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Locally adapted gut microbiomes mediate host stress tolerance

Shira Houwenhuyse (UGent) , Robby Stoks, Shinjini Mukherjee and Ellen Decaestecker

(2021) ISME JOURNAL. 15(8). p.2401-2414
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The role of microbiome and genotype in Daphnia magna upon parasite re-exposure

Lore Bulteel, Shira Houwenhuyse (UGent) , Steven A. J. Declerck and Ellen Decaestecker

(2021) GENES. 12(1).
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Human impact on symbioses between aquatic organisms and microbes

Willem Stock (UGent) , Martijn Callens (UGent) , Shira Houwenhuyse (UGent) , Ruben Schols, Naina Goel (UGent) , Mallon Coone, Charlotte Theys, Vienna Delnat, Alice Boudry, Ester M. Eckert, et al.

(2021) AQUATIC MICROBIAL ECOLOGY. 87. p.113-138
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The bacterioplankton community composition and a host genotype dependent occurrence of taxa shape the Daphnia magna gut bacterial community

Martijn Callens (UGent) , Luc De Meester, Koenraad Muylaert, Shinjini Mukherjee and Ellen Decaestecker

(2020) FEMS MICROBIOLOGY ECOLOGY. 96(8).
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Diet and genotype of an aquatic invertebrate affect the composition of free-living microbial communities

Emilie Macke, Martijn Callens (UGent) , Francois Massol, Isabel Vanoverberghe, Luc De Meester and Ellen Decaestecker

(2020) FRONTIERS IN MICROBIOLOGY. 11.
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Daphnia magna tolerance to toxic cyanobacteria in the presence of an opportunistic infection within an evolutionary perspective

Alice Boudry, Sarah Devliegere, Shira Houwenhuyse (UGent) , Lucas Clarysse, Emilie Macke, Isabel Vanoverberghe and Ellen Decaestecker

(2020) BELGIAN JOURNAL OF ZOOLOGY. 150. p.81-93
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Food nutrient availability affects epibiont prevalence and richness in natural Daphnia populations

Lien Reyserhove, Lore Bulteel, Jing Liu, Caroline Souffreau, Kristien I. Brans, Jessie M.T. Engelen, Luc De Meester, Frederik Hendrickx (UGent) , Koenraad Muylaert, Steven A. J. Declerck, et al.

(2020) LIMNOLOGY AND OCEANOGRAPHY. 65(10). p.2529-2540
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Urbanization drives cross-taxon declines in abundance and diversity at multiple spatial scales

Elena Piano, Caroline Souffreau, Thomas Merckx, Lisa F. Baardsen, Thierry Backeljau, Dries Bonte (UGent) , Kristien I. Brans, Marie Cours (UGent) , Maxime Dahirel (UGent) , Nicolas Debortoli, et al.

(2020) GLOBAL CHANGE BIOLOGY. 26(3). p.1196-1211

Academic Bibliography

How does co-occurrence of Daphnia species affect their gut microbiome?

The effect of hypoxia on Daphnia magna performance and its associated microbial and bacterioplankton community : a scope for phenotypic plasticity and microbiome community interactions upon environmental stress?

Locally adapted gut microbiomes mediate host stress tolerance

The role of microbiome and genotype in Daphnia magna upon parasite re-exposure

Human impact on symbioses between aquatic organisms and microbes

The bacterioplankton community composition and a host genotype dependent occurrence of taxa shape the Daphnia magna gut bacterial community

Diet and genotype of an aquatic invertebrate affect the composition of free-living microbial communities

Daphnia magna tolerance to toxic cyanobacteria in the presence of an opportunistic infection within an evolutionary perspective

Food nutrient availability affects epibiont prevalence and richness in natural Daphnia populations

Urbanization drives cross-taxon declines in abundance and diversity at multiple spatial scales

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