Ghent University Academic Bibliography

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Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium

Johannes Berbers (UGent) , Kevin Vanneste, Nancy H. C. J. Roosens, Kathleen Marchal (UGent) , Pieter-Jan Ceyssens and Sigrid C. J. De Keersmaecker

(2023) MICROBIAL GENOMICS. 9(1).
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Foundation of the Belgian Society for Viruses of Microbes and meeting report of its inaugural symposium

Agnieszka Łątka (UGent) , Abram Aertsen, Dimitri Boeckaerts (UGent) , Bob Blasdel, Pieter-Jan Ceyssens, Abel Garcia-Pino, Annika Gillis, Rob Lavigne, Gipsi Lima-Mendez, Jelle Matthijnssens, et al.

(2023) VIRUSES-BASEL. 15(5).
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Launch of the Belgian Society for Viruses of Microbes

Abram Aersten, Bob Blasdel, Dimitri Boeckaerts (UGent) , Pieter-Jan Ceyssens, Abel Garcia-Pino, Annika Gillis, Agnieszka Łątka (UGent) , Rob Lavigne, Gipsi Lima-Mendez, Jelle Matthijnssens, et al.

(2022) Viruses of Microbes 2022, Abstracts.
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Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation

Bert Bogaerts, Raf Winand, Julien Van Braekel, Wesley Mattheus, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kathleen Marchal (UGent) , Kevin Vanneste and Pieter-Jan Ceyssens

(2021) MICROORGANISMS. 9(4).
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A bioinformatics whole-genome sequencing workflow for clinical Mycobacterium tuberculosis complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and in silico approaches

Bert Bogaerts, Thomas Delcourt, Karine Soetaert, Samira Boarbi, Pieter-Jan Ceyssens, Raf Winand, Julien Van Braekel, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kathleen Marchal (UGent) , et al.

(2021) JOURNAL OF CLINICAL MICROBIOLOGY. 59(6).
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Development of an NGS-based workflow for improved monitoring of circulating plasmids in support of risk assessment of antimicrobial resistance gene dissemination

Bas Berbers, Pieter-Jan Ceyssens, Pierre Bogaerts, Kevin Vanneste (UGent) , Nancy Roosens, Kathleen Marchal (UGent) and Sigrid C.J. De Keersmaecker

(2020) ANTIBIOTICS-BASEL. 9(8).
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Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

Bert Bogaerts, Raf Winand, Qiang Fu, Julien Van Braekel, Pieter-Jan Ceyssens, Wesley Mattheus, Sophie Bertrand, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2019) FRONTIERS IN MICROBIOLOGY. 10.
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Rapid detection of tetracycline resistance in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

Laura Van Driessche, Jade Bokma (UGent) , Linde Gille, Pieter-Jan Ceyssens, Katrin Sparbier, Freddy Haesebrouck (UGent) , Piet Deprez (UGent) , Filip Boyen (UGent) and Bart Pardon (UGent)

(2018) SCIENTIFIC REPORTS. 8.
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Rapid tetracycline resistance detection in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

Laura Van Driessche, Jade Bokma (UGent) , Linde Gille, Pieter-Jan Ceyssens, Katrin Sparbier, Freddy Haesebrouck (UGent) , Piet Deprez (UGent) , Filip Boyen (UGent) and Bart Pardon (UGent)

(2018) Bruker MALDI Biotyper, BeLux Users meeting, Presentations.
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Rapid detection of tetracycline resistance in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

Laura Van Driessche, Jade Bokma (UGent) , Linde Gille, Pieter-Jan Ceyssens, Katrin Sparbier, Freddy Haesebrouck (UGent) , Piet Deprez (UGent) , Filip Boyen (UGent) and Bart Pardon (UGent)

(2018) INTERNATIONAL JOURNAL OF HEALTH ANIMAL SCIENCE AND FOOD SAFETY. 5(3, suppl.).

Academic Bibliography

Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium

Foundation of the Belgian Society for Viruses of Microbes and meeting report of its inaugural symposium

Launch of the Belgian Society for Viruses of Microbes

Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation

A bioinformatics whole-genome sequencing workflow for clinical Mycobacterium tuberculosis complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and in silico approaches

Development of an NGS-based workflow for improved monitoring of circulating plasmids in support of risk assessment of antimicrobial resistance gene dissemination

Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

Rapid detection of tetracycline resistance in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

Rapid tetracycline resistance detection in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

Rapid detection of tetracycline resistance in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)

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