Ghent University Academic Bibliography

Your filters: cql: author="Boeckaerts, Dimitri" or (type any "bookEditor issueEditor" and editor="Boeckaerts, Dimitri")

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- Journal Article
- A1
- open access
KlebPhaCol : a community-driven resource for Klebsiella research identified a novel phage family

Daniela Rothschild-Rodriguez, Kai S Lambon, Simran Krishnakant Kushwaha, Sofya K Garushyants, Moritz Ertelt, Agnieszka Łątka (UGent) , Ana Rita Costa, Anna Mantzouratou, Claire King, Dimitri Boeckaerts, et al.

(2025) NUCLEIC ACIDS RESEARCH. 53(21).
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- Conference Paper
- C3
Machine learning tools versus manual approach for detection of Klebsiella phage depolymerases

Ilaria De Angelis (UGent) , Agnieszka Łątka (UGent) , Dimitri Boeckaerts, Britt Van Mieghem and Yves Briers (UGent)

(2024) 3rd Belgian Society for Viruses of Microbes (BSVoM) Symposium, Abstracts.
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- Journal Article
- A1
- open access
Hyperdimensional computing : a fast, robust, and interpretable paradigm for biological data

Michiel Stock (UGent) , Wim Van Criekinge (UGent) , Dimitri Boeckaerts, Steff Taelman (UGent) , Maxime Van Haeverbeke (UGent) , Pieter Dewulf and Bernard De Baets (UGent)

(2024) PLOS COMPUTATIONAL BIOLOGY. 20(9).
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DepoScope : accurate phage depolymerase annotation and domain delineation using large language models

Robby Concha-Eloko, Michiel Stock (UGent) , Bernard De Baets (UGent) , Yves Briers (UGent) , Rafael Sanjuán, Pilar Domingo-Calap and Dimitri Boeckaerts

(2024) PLOS COMPUTATIONAL BIOLOGY. 20(8).
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- Journal Article
- A1
- open access
Prediction of Klebsiella phage-host specificity at the strain level

Dimitri Boeckaerts, Michiel Stock (UGent) , Celia Ferriol-González, Jesús Oteo-Iglesias, Rafael Sanjuán, Pilar Domingo-Calap, Bernard De Baets (UGent) and Yves Briers (UGent)

(2024) NATURE COMMUNICATIONS. 15(1).
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- Miscellaneous
- open access
KlebPhaCol : a community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut

Daniela Rothschild-Rodriguez, Kai S. Lambon, Agnieszka Łątka (UGent) , Ana Rita Costa, Anna Mantzouratou, Claire King, Dimitri Boeckaerts, Elizabeth Sheridan, Francesca Merrick, Francis Drobniewski, et al.

(2024) bioRxiv.
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- PhD Thesis
Predicting and understanding phage-host interactions with machine learning tools based on phage receptor-binding proteins

Dimitri Boeckaerts

(2023)
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- Conference Paper
- C3
Biology-based machine learning to predict phage-host specificity for the clinical phage therapist

Dimitri Boeckaerts, Célia Pas (UGent) , Agnieszka Łątka (UGent) , Michiel Stock (UGent) , Celia Ferriol-González, Rafael Sanjuan, Pilar Domingo-Calap, Lars Fieseler, Bernard De Baets (UGent) and Yves Briers (UGent)

(2023) Viruses of Microbes 2023, Abstracts.
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- Journal Article
- A1
- open access
CkP1 bacteriophage, a S16-like myovirus that recognizes Citrobacter koseri lipopolysaccharide through its long tail fibers

Hugo Oliveira, Silvio Santos, Diana P. Pires, Dimitri Boeckaerts, Graca Pinto, Rita Domingues, Jennifer Otero, Yves Briers (UGent) , Rob Lavigne, Mathias Schmelcher, et al.

(2023) APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 107(11). p.3621-3636
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- Journal Article
- A1
- open access
Foundation of the Belgian Society for Viruses of Microbes and meeting report of its inaugural symposium

Agnieszka Łątka (UGent) , Abram Aertsen, Dimitri Boeckaerts, Bob Blasdel, Pieter-Jan Ceyssens, Abel Garcia-Pino, Annika Gillis, Rob Lavigne, Gipsi Lima-Mendez, Jelle Matthijnssens, et al.

(2023) VIRUSES-BASEL. 15(5).

Academic Bibliography

KlebPhaCol : a community-driven resource for Klebsiella research identified a novel phage family

Machine learning tools versus manual approach for detection of Klebsiella phage depolymerases

Hyperdimensional computing : a fast, robust, and interpretable paradigm for biological data

DepoScope : accurate phage depolymerase annotation and domain delineation using large language models

Prediction of Klebsiella phage-host specificity at the strain level

KlebPhaCol : a community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut

Predicting and understanding phage-host interactions with machine learning tools based on phage receptor-binding proteins

Biology-based machine learning to predict phage-host specificity for the clinical phage therapist

CkP1 bacteriophage, a S16-like myovirus that recognizes Citrobacter koseri lipopolysaccharide through its long tail fibers

Foundation of the Belgian Society for Viruses of Microbes and meeting report of its inaugural symposium

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