Ghent University Academic Bibliography

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A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

Mathieu Gand, Wesley Mattheus, Nancy HC Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sigrid CJ De Keersmaecker and Sophie Bertrand

(2020) FOOD MICROBIOLOGY. 87.
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- Journal Article
- A1
- open access
A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium

Mathieu Gand, Wesley Mattheus, Nancy Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sophie Bertrand and Sigrid C. J. De Keersmaecker

(2020) FOOD MICROBIOLOGY. 91.
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The ethylene precursor ACC affects early vegetative development independently of ethylene signaling

Lisa Vanderstraeten, Thomas Depaepe (UGent) , Sophie Bertrand (UGent) and Dominique Van Der Straeten (UGent)

(2019) FRONTIERS IN PLANT SCIENCE. 10.
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- Journal Article
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- open access
Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing : Neisseria meningitidis as a proof of concept

Assia Saltykova, Wesley Mattheus, Sophie Bertrand, Nancy HC Roosens, Kathleen Marchal (UGent) and Sigrid CJ De Keersmaecker

(2019) FRONTIERS IN MICROBIOLOGY. 10.
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Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java

Mathieu Gand, Wesley Mattheus, Assia Saltykova, Nancy Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sigrid C. J. De Keersmaecker and Sophie Bertrand

(2019) APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 103(12). p.4987-4996
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- Journal Article
- A1
Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

Bert Bogaerts, Raf Winand, Qiang Fu, Julien Van Braekel, Pieter-Jan Ceyssens, Wesley Mattheus, Sophie Bertrand, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens and Kevin Vanneste

(2019) FRONTIERS IN MICROBIOLOGY. 10.
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Quantification of hygiene indicators and Salmonella in the tonsils, oral cavity and rectal content samples of pigs during slaughter

Inge Van Damme (UGent) , Wesley Mattheus, Sophie Bertrand and Lieven De Zutter (UGent)

(2018) FOOD MICROBIOLOGY. 71. p.120-128
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Correlation between slaughter practices and the distribution of Salmonella and hygiene indicator bacteria on pig carcasses during slaughter

Wauter Biasino, Lieven De Zutter (UGent) , Wesley Mattheus, Sophie Bertrand, Mieke Uyttendaele (UGent) and Inge Van Damme (UGent)

(2018) FOOD MICROBIOLOGY. 70. p.192-199
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Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5], 12:i:-

Assia Saltykova, Véronique Wuyts, Wesley Mattheus, Sophie Bertrand, Nancy HC Roosens, Kathleen Marchal (UGent) and Sigrid De Keersmaecker

(2018) PLOS ONE. 13(2).
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- Book Chapter
Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)

Véronique Wuyts, Wesley Mattheus, Nancy HC Roosens, Kathleen Marchal (UGent) , Sophie Bertrand and Sigrid CJ De Keersmaecker

(2017) Diagnostic bacteriology : methods and protocols. In Methods in Molecular Biology 1616. p.39-69

Academic Bibliography

A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium

The ethylene precursor ACC affects early vegetative development independently of ethylene signaling

Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing : Neisseria meningitidis as a proof of concept

Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java

Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National Reference Center : Neisseria meningitidis as a proof-of-concept

Quantification of hygiene indicators and Salmonella in the tonsils, oral cavity and rectal content samples of pigs during slaughter

Correlation between slaughter practices and the distribution of Salmonella and hygiene indicator bacteria on pig carcasses during slaughter

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5], 12:i:-

Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)

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