Ghent University Academic Bibliography

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The Metaproteomics Initiative : five years of community-driven progress

Tim Van Den Bossche (UGent) , Lucia Grenga, Gelio Alves, Magnus Ø. Arntzen, Dirk Benndorf, Madita Brauer, Daniel Figeys, Celine Henry, Robert L. Hettich, Robert Heyer, et al.

(2026) MICROBIOME. 14(1).
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The need for standardization and improved open (meta)data practices in metaproteomics

Tim Van Den Bossche (UGent) , Maximilian Wolf, Jean Armengaud, Magnus Ø. Arntzen, Dirk Benndorf, Daniel Figeys, Lucia Grenga, Robert L. Hettich, Nithu Sara John, Pratik Jagtap, et al.

(2026) MICROBIOME. 14(1).
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Metaproteomics in the One Health framework for unraveling microbial effectors in microbiomes

Robert Heyer, Maximilian Wolf, Dirk Benndorf, Sergio Uzzau, Jana Seifert, Lucia Grenga, Martin Pabst, Heike Schmitt, Bart Mesuere (UGent) , Tim Van Den Bossche (UGent) , et al.

(2025) MICROBIOME. 13(1).
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Critical Assessment of MetaProteome Investigation 2 (CAMPI-2) : multi-laboratory assessment of sample processing methods to stabilize fecal microbiome for functional analysis

Alessandro Tanca, Kay Schallert, Lucia Grenga, Samantha L. Peters, Marcello Abbondio, Laura De Diego, Maria Antonietta Deledda, Sven-Bastiaan Haange, Guylaine Miotello, Johan S. Sáenz, et al.

(2025) MICROBIOME. 13(1).
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The microbiologist’s guide to metaproteomics

Tim Van Den Bossche (UGent) , Jean Armengaud, Dirk Benndorf, Jose Alfredo Blakeley-Ruiz, Madita Brauer, Kai Cheng, Marybeth Creskey, Daniel Figeys, Lucia Grenga, Timothy J Griffin, et al.

(2025) ChemRxiv.
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The microbiologist's guide to metaproteomics

Tim Van Den Bossche (UGent) , Jean Armengaud, Dirk Benndorf, Jose Alfredo Blakeley‐Ruiz, Madita Brauer, Kai Cheng, Marybeth Creskey, Daniel Figeys, Lucia Grenga, Timothy J. Griffin, et al.

(2025) IMETA. 4(3).
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Cyclical patterns affect microbial dynamics in the water basin of a nuclear research reactor

Valerie Van Eesbeeck, Ruben Props (UGent) , Mohamed Mysara, Pauline C. M. Petit, Corinne Rivasseau, Jean Armengaud, Pieter Monsieurs, Jacques Mahillon and Natalie Leys

(2021) FRONTIERS IN MICROBIOLOGY. 12.
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The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

Tim Van Den Bossche (UGent) , Magnus Ø. Arntzen, Dörte Becher, Dirk Benndorf, Vincent G. H. Eijsink, Céline Henry, Pratik D. Jagtap, Nico Jehmlich, Catherine Juste, Benoit J. Kunath, et al.

(2021) MICROBIOME. 9(1).
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Critical Assessment of MetaProteome Investigation (CAMPI) : a multi-laboratory comparison of established workflows

Tim Van Den Bossche (UGent) , Benoit J. Kunath, Kay Schallert, Stephanie S. Schäpe, Paul E. Abraham, Jean Armengaud, Magnus Ø. Arntzen, Ariane Bassignani, Dirk Benndorf, Stephan Fuchs, et al.

(2021) NATURE COMMUNICATIONS. 12(1).
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Critical assessment of metaproteome investigation (CAMPI) : a multi-lab comparison of established workflows

Tim Van Den Bossche (UGent) , Benoit J. Kunath, Kay Schallert, Stephanie S. Schäpe, Paul E. Abraham, Jean Armengaud, Magnus Ø. Arntzen, Ariane Bassignani, Dirk Benndorf, Stephan Fuchs, et al.

(2021) BIORXIV.

Academic Bibliography

The Metaproteomics Initiative : five years of community-driven progress

The need for standardization and improved open (meta)data practices in metaproteomics

Metaproteomics in the One Health framework for unraveling microbial effectors in microbiomes

Critical Assessment of MetaProteome Investigation 2 (CAMPI-2) : multi-laboratory assessment of sample processing methods to stabilize fecal microbiome for functional analysis

The microbiologist’s guide to metaproteomics

The microbiologist's guide to metaproteomics

Cyclical patterns affect microbial dynamics in the water basin of a nuclear research reactor

The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

Critical Assessment of MetaProteome Investigation (CAMPI) : a multi-laboratory comparison of established workflows

Critical assessment of metaproteome investigation (CAMPI) : a multi-lab comparison of established workflows

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