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- 2017
- A unified censored normal regression model for qPCR differential gene expression analysis
- 2015
- Using transcriptomics to guide lead optimization in drug discovery projects : lessons learned from the QSTAR project
- ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering
- VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering
- 2014
- unifiedWMWqPCR: the unified Wilcoxon–Mann–Whitney test for analyzing RT-qPCR data in R
- 2013
- An extension of the Wilcoxon-Mann-Whitney test for analyzing RT-qPCR data
- 2012
- An omnibus consistent adaptive percentile modified Wilcoxon rank sum test with applications in gene expression studies
- Improved base-calling and quality scores for 454 sequencing based on a Hurdle Poisson model
- Fast wavelet based functional models for transcriptome analysis with tiling arrays
-
Probabilistic index models
(2012) JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY. 74(4). p.623-671 Mark
- Flow cytometry for fast microbial community fingerprinting
- Analysis of tiling array expression studies with flexible designs in Bioconductor (waveTiling)
- 2011
- Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics
- Probabilistic index models
- Flow cytometry community fingerprinting to detect quickly stress in drinking water systems
- 2009
- A semiparametric unified approach for the detection of differential gene expression in microarrays
- Initial community evenness favours functionality under selective stress
- Monte Carlo simulation of false change in the overlay of misregistered forest vector maps
- Nonparametric trend detection in river monitoring network data: a spatio-temporal approach
- Testing for trends in the violation frequency of an environmental threshold in rivers
- 2007
- Data management of river water quality data: a semi-automatic procedure for data validation
- Estimating and modeling spatio-temporal correlation structures for river monitoring networks
- Statistical validation and spatio-temporal modelling of river monitoring networks
- 2006
- Spatio-temporal statistical models for river monitoring networks
- Nonparametric trend detection in spatio-temporal river monitoring networks
- 2005
- Spatio-temporal river monitoring network modelling
- 2004
- Spatio-Temporal Statistical Models for River Monitoring Networks
- 2003
- Statistical Validation of Water Quality Data
- 2001
- An overview of the posters presented at Watermatex 2000. II. Sensor/monitoring, control and decision support systems