Ghent University Academic Bibliography

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- Miscellaneous
HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization

Laurens Lambrechts (UGent) , Noah Bonine (UGent) , Rita Verstraeten, Marion Pardons (UGent) , Ytse Noppe (UGent) , Sofie Rutsaert (UGent) , Filip Van Nieuwerburgh (UGent) , Wim Van Criekinge (UGent) , Basiel Cole (UGent) and Linos Vandekerckhove (UGent)

(2023) BioRXiv.
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- Conference Paper
- C3
A genomic urine assay to detect urinary tract recurrences in patients with bladder cancer treated with radiotherapy

Florus C. de Jong, Iris I. Ifle, Denise Kooper, Angelique C. J. van der Made, Joep J. De Jong, Tahlita C. M. Zuiverloon, Luca Incrocci, Wim Van Criekinge (UGent) , Martine Franckena, Joost L. Boormans, et al.

(2022) JOURNAL OF UROLOGY. 207(suppl. 5). p.E84-E84
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- Conference Paper
- C3
A urine-based molecular assay refines the risk stratification of the recent American Urological Association guideline on hematuria

Joep de Jong, Olga Pijpers, Kim van Kessel, Joost Boormans, Wim Van Criekinge (UGent) , Ellen Zwarthoff and Yair Lotan

(2022) JOURNAL OF UROLOGY. 207(suppl. 5). p.E928-E929
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- Journal Article
- A1
- open access
Technical considerations in PCR-based assay design for diagnostic DNA methylation cancer biomarkers

Maartje Massen, Kim Lommen, Kim A. D. Wouters, Johan Vandersmissen, Wim Van Criekinge (UGent) , James G. Herman, Veerle Melotte, Leo J. Schouten, Manon van Engeland and Kim M. Smits

(2022) CLINICAL EPIGENETICS. 14(1).
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Exploring PhaLP, an open source portal for Phage Lytic Proteins, to engineer modular enzybiotics against vancomycin-resistant Enterococcus faecalis

Bjorn Criel (UGent) , Wim Van Criekinge (UGent) and Yves Briers (UGent)

(2022) Viruses of Microbes 2022, Abstracts.
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- Journal Article
- A1
- open access
Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing

Laurentijn Tilleman (UGent) , Kaat Rubben (UGent) , Wim Van Criekinge (UGent) , Dieter Deforce (UGent) and Filip Van Nieuwerburgh (UGent)

(2022) SCIENTIFIC REPORTS. 12(1).
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Exploring PhaLP, an open source portal for Phage Lytic Proteins, to engineer modular enzybiotics against vancomycin-resistant Enterococcus faecalis

Bjorn Criel (UGent) , Wim Van Criekinge (UGent) and Yves Briers (UGent)

(2022) Belgian Society for Viruses of Microbes (BSVoM) Symposium, 1st, Abstracts.
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Machine learning-guided engineering of modular enzybiotics to target vancomycin-resistant Enterococcus faecalis infections of the urinary tract

Bjorn Criel (UGent) , Wim Van Criekinge (UGent) and Yves Briers (UGent)

(2022) National Symposium for Applied Biological Sciences, 26th, Abstracts.
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- Journal Article
- A1
- open access
PhaLP : a database for the study of phage lytic proteins and their evolution

Bjorn Criel (UGent) , Steff Taelman (UGent) , Wim Van Criekinge (UGent) , Michiel Stock (UGent) and Yves Briers (UGent)

(2021) VIRUSES-BASEL. 13(7).
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- Journal Article
- A1
- open access
Spectral prediction features as a solution for the search space size problem in proteogenomics

Steven Verbruggen (UGent) , Siegfried Gessulat, Ralf Gabriels (UGent) , Anna Matsaroki (UGent) , Hendrik Van de Voorde (UGent) , Bernhard Kuster, Sven Degroeve (UGent) , Lennart Martens (UGent) , Wim Van Criekinge (UGent) , Mathias Wilhelm, et al.

(2021) MOLECULAR & CELLULAR PROTEOMICS. 20.

Academic Bibliography

HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization

A genomic urine assay to detect urinary tract recurrences in patients with bladder cancer treated with radiotherapy

A urine-based molecular assay refines the risk stratification of the recent American Urological Association guideline on hematuria

Technical considerations in PCR-based assay design for diagnostic DNA methylation cancer biomarkers

Exploring PhaLP, an open source portal for Phage Lytic Proteins, to engineer modular enzybiotics against vancomycin-resistant Enterococcus faecalis

Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing

Exploring PhaLP, an open source portal for Phage Lytic Proteins, to engineer modular enzybiotics against vancomycin-resistant Enterococcus faecalis

Machine learning-guided engineering of modular enzybiotics to target vancomycin-resistant Enterococcus faecalis infections of the urinary tract

PhaLP : a database for the study of phage lytic proteins and their evolution

Spectral prediction features as a solution for the search space size problem in proteogenomics

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