Ghent University Academic Bibliography

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Estimating the reliability of low-abundant signals and limited replicate measurements through MS2 peak area in SWATH

Franck Limonier, Sander Willems (UGent) , Geneviève Waeterloos, Myriam Sneyers, Maarten Dhaenens (UGent) and Dieter Deforce (UGent)

(2019) PROTEOMICS.
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- journalArticle
Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency

Guido van Mierlo, René A.M. Dirks, Laura De Clerck (UGent) , Arie B. Brinkman, Michelle Huth, Susan L. Kloet, Nehmé Saksouk, Leonie I. Kroeze, Sander Willems (UGent) , Matthias Farlik, et al.

(2018) Cell Stem Cell.
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Skin mucosome activity as an indicator of Batrachochytrium salamandrivorans susceptibility in salamanders

Hannah Keely Smith (UGent) , Frank Pasmans (UGent) , Maarten Dhaenens (UGent) , Dieter Deforce (UGent) , Dries Bonte (UGent) , Kris Verheyen (UGent) , Luc Lens (UGent) and An Martel (UGent)

(2018) PLOS ONE. 13(7).
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Comparison of fractionation proteomics for local SWATH library building

Elisabeth Govaert (UGent) , Katleen Van Steendam (UGent) , Sander Willems (UGent) , Liesbeth Vossaert (UGent) , Maarten Dhaenens (UGent) and Dieter Deforce (UGent)

(2017) PROTEOMICS. 17(15-16).
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RMNE calculation in forensic profiles with a high number of loci and allelic drop-outs using polynomial expansion

Sander Willems (UGent) , Senne Cornelis (UGent) , Yannick Gansemans (UGent) , Bart Broeckx (UGent) , Dieter De Coninck (UGent) , Christophe Van Neste (UGent) , Maarten Dhaenens (UGent) , Dieter Deforce (UGent) and Filip Van Nieuwerburgh (UGent)

(2017) FORENSIC SCIENCE INTERNATIONAL-GENETICS. 26. p.E14-E16
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Flagging false positives following untargeted LCMS characterization of histone PTM combinations

Sander Willems (UGent) , Maarten Dhaenens (UGent) , Elisabeth Govaert (UGent) , Laura De Clerck (UGent) , Paulien Meert (UGent) , Christophe Van Neste (UGent) , Filip Van Nieuwerburgh (UGent) and Dieter Deforce (UGent)

(2017) JOURNAL OF PROTEOME RESEARCH. 16(2). p.655-664
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Israeli acute paralysis virus infection leads to an enhanced RNA interference response and not its suppression in the bumblebee Bombus terrestris

Kaat Cappelle (UGent) , Guy Smagghe (UGent) , Maarten Dhaenens (UGent) and Ivan Meeus (UGent)

(2016) VIRUSES-BASEL. 8(12).
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Assessing the impact of minimizing arginine conversion in fully defined SILAC culture medium in human embryonic stem cells

Ellen Scheerlinck (UGent) , Katleen Van Steendam (UGent) , Simon Daled (UGent) , Elisabeth Govaert (UGent) , Liesbeth Vossaert (UGent) , Paulien Meert (UGent) , Filip Van Nieuwerburgh (UGent) , Ann Van Soom (UGent) , Luc Peelman (UGent) , Petra De Sutter (UGent) , et al.

(2016) PROTEOMICS. 16(20). p.2605-2614
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Host stress drives Salmonella recrudescence

Elin Verbrugghe (UGent) , Maarten Dhaenens (UGent) , Bregje Leyman (UGent) , Filip Boyen (UGent) , Neil Shearer, Alexander Van Parys (UGent) , Roel Haesendonck (UGent) , Wim Bert (UGent) , Herman Favoreel (UGent) , Dieter Deforce (UGent) , et al.

(2016) SCIENTIFIC REPORTS. 6.
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Extracting histones for the specific purpose of label-free MS

Elisabeth Govaert (UGent) , Katleen Van Steendam (UGent) , Ellen Scheerlinck (UGent) , Liesbeth Vossaert (UGent) , Paulien Meert (UGent) , Martina Stella, Sander Willems (UGent) , Laura De Clerck (UGent) , Maarten Dhaenens (UGent) and Dieter Deforce (UGent)

(2016) PROTEOMICS. 16(23). p.2937-2944

Academic Bibliography

Estimating the reliability of low-abundant signals and limited replicate measurements through MS2 peak area in SWATH

Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency

Skin mucosome activity as an indicator of Batrachochytrium salamandrivorans susceptibility in salamanders

Comparison of fractionation proteomics for local SWATH library building

RMNE calculation in forensic profiles with a high number of loci and allelic drop-outs using polynomial expansion

Flagging false positives following untargeted LCMS characterization of histone PTM combinations

Israeli acute paralysis virus infection leads to an enhanced RNA interference response and not its suppression in the bumblebee Bombus terrestris

Assessing the impact of minimizing arginine conversion in fully defined SILAC culture medium in human embryonic stem cells

Host stress drives Salmonella recrudescence

Extracting histones for the specific purpose of label-free MS

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