Ghent University Academic Bibliography

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- Miscellaneous
Embracing algal models

Susana M. Coelho and Olivier De Clerck (UGent)

(2023) SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY. 134. p.1-3
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- Book Chapter
Evolution, biology, and genetics of seaweeds

Willem Stock (UGent) , Jonas Blomme (UGent) , Xiaojie Liu and Olivier De Clerck (UGent)

(2023) Applications of Seaweeds in Food and Nutrition. p.19-34
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- Journal Article
- A1
- open access
Ulva : an emerging green seaweed model for systems biology

Jonas Blomme (UGent) , Thomas Wichard, Thomas B. Jacobs (UGent) and Olivier De Clerck (UGent)

(2023) JOURNAL OF PHYCOLOGY. 59(3). p.433-440
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- Book Chapter
- open access
Studying whole-genome duplication using experimental evolution of Chlamydomonas

Quinten Bafort (UGent) , Lucas Prost (UGent) , Eylem Aydogdu Lohaus (UGent) , Antoine Van de Vloet (UGent) , Griet Casteleyn (UGent) , Yves Van de Peer (UGent) and Olivier De Clerck (UGent)

(2023) Polyploidy : methods and protocols. In Methods in Molecular Biology 2545. p.351-372
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- PhD Thesis
Responding to a warming ocean : a case study of the brown seaweed Dictyota dichotoma

Soria Delva (UGent)

(2023)
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- Journal Article
- A1
Molecular assessment of Ulva (Ulvales, Chlorophyta) diversity in Vietnam including the new species U. vietnamensis

Lan-Anh T. Tran (UGent) , Frédérik Leliaert (UGent) , Christophe Vieira (UGent) , Tien V. Tran, Tu V. Nguyen, Tien D. Dam and Olivier De Clerck (UGent)

(2023) PHYCOLOGICAL RESEARCH. 71(1). p.13-24
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- Journal Article
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Polarization of brown algal zygotes

Kenny Bogaert (UGent) , Eliane Zakka (UGent) , Susana M. Coelho and Olivier De Clerck (UGent)

(2023) SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY. 134. p.90-102
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Tracing the introduction of Dictyota acutiloba (Dictyotales, Phaeophyceae) in the Mediterranean Sea, with a reassessment of its geographic distribution

Soria Delva (UGent) , Camino Fernández de la Hoz, Quinten Bafort (UGent) , Sofie D'hondt (UGent) , Soha Shabaka, Sarah Hamdy Rashedy, Alison R. Sherwood, Tamar Guy-Haim, Alvaro Israel and Olivier De Clerck (UGent)

(2023) EUROPEAN JOURNAL OF PHYCOLOGY. 59(1). p.38-50
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AlgaeTraits : a trait database for (European) seaweeds

Sofie Vranken (UGent) , Marine Robuchon, Stefanie Dekeyzer, Ignacio Bárbara, Inka Bartsch, Aurélie Blanfuné, Charles-Francois Boudouresque, Wim Decock, Christophe Destombe, Bruno de Reviers, et al.

(2023) EARTH SYSTEM SCIENCE DATA. 15(7). p.2711-2754
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First records of the non-indigenous green algal species Siphonocladus tropicus (Cladophorales, Chlorophyta) and Caulerpa integerrima (Bryopsidales, Chlorophyta) in the Mediterranean Sea

Razy Hoffman, Olivier De Clerck (UGent) and Frédérik Leliaert (UGent)

(2023) EUROPEAN JOURNAL OF PHYCOLOGY. 58(3). p.255-267
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- Journal Article
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Marine biodiversity exposed to prolonged and intense subsurface heatwaves

Eliza Fragkopoulou, Alex Sen Gupta, Mark John Costello, Thomas Wernberg, Miguel B. Araújo, Ester A. Serrão, Olivier De Clerck (UGent) and Jorge Assis

(2023) NATURE CLIMATE CHANGE. 13. p.1114-1121
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Phylotranscriptomics unveil a Paleoproterozoic-Mesoproterozoic origin and deep relationships of the Viridiplantae

Zhiping Yang, Xiaoya Ma, Qiuping Wang, Xiaolin Tian, Jingyan Sun, Zhenhua Zhang, Shuhai Xiao, Olivier De Clerck (UGent) , Frédérik Leliaert (UGent) and Bojian Zhong

(2023) NATURE COMMUNICATIONS. 14(1).
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Diversity, systematics and biogeography of French Polynesian Lobophora (Dictyotales, Phaeophyceae)

Christophe Vieira (UGent) , Olivier De Clerck (UGent) , Antoine De Ramon N'Yeurt, An-Sofie D'Hondt, Laurent Millet, Myung Sook Kim, Claude Payri and Mayalen Zubia

(2023) EUROPEAN JOURNAL OF PHYCOLOGY. 58(2). p.226-253
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The immediate effects of polyploidization of Spirodela polyrhiza change in a strain-specific way along environmental gradients

Quinten Bafort (UGent) , Tian Wu (UGent) , Annelore Natran (UGent) , Olivier De Clerck (UGent) and Yves Van de Peer (UGent)

(2023) EVOLUTION LETTERS. 7(1). p.37-47
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- Journal Article
- A1
Warming and nutrient enrichment can trigger seaweed loss by dysregulation of the microbiome structure and predicted function

Francesco Paolo Mancuso (UGent) , Kathryn Morrissey, Olivier De Clerck (UGent) and Laura Airoldi

(2023) SCIENCE OF THE TOTAL ENVIRONMENT. 879.
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Marine flora of French Polynesia : an updated list using DNA barcoding and traditional approaches

Christophe Vieira (UGent) , Myung Sook Kim, Antoine De Ramon N'Yeurt, Claude Payri, Sofie D'hondt (UGent) , Olivier De Clerck (UGent) and Mayalen Zubia

(2023) BIOLOGY-BASEL. 12(8).
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- A1
Non-indigenous seaweeds in the Northeast Atlantic Ocean, the Mediterranean Sea and Macaronesia: a critical synthesis of diversity, spatial and temporal patterns

Luna van der Loos (UGent) , Quinten Bafort (UGent) , Samuel Bosch, Enric Ballesteros, Ignacio Bárbara, Estibaliz Berecibar, Aurélie Blanfuné, Kenny Bogaert (UGent) , Silke Bouckenooghe, Charles-Francois Boudouresque, et al.

(2023) EUROPEAN JOURNAL OF PHYCOLOGY.
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Range-edge populations of seaweeds show niche unfilling and poor adaptation to increased temperatures

Sandra Hernández, Ana G. García, Francisco Arenas, M. Pilar Escribano, Alexander Jueterbock, Olivier De Clerck (UGent) , Christine A. Maggs, João N. Franco and Brezo D. C. Martínez

(2023) JOURNAL OF BIOGEOGRAPHY. 50(4). p.780-791
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Salinity and host drive Ulva-associated bacterial communities across the Atlantic–Baltic Sea gradient

Luna van der Loos (UGent) , Sofie D'hondt (UGent) , Aschwin H. Engelen, Henrik Pavia, Gunilla B. Toth, Anne Willems (UGent) , Florian Weinberger, Olivier De Clerck (UGent) and Sophie Steinhagen

(2023) MOLECULAR ECOLOGY. 32(23). p.6260-6277
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- open access
No bacterial-mediated alleviation of thermal stress in a brown seaweed suggests the absence of ecological bacterial rescue effects

Soria Delva (UGent) , Bernard De Baets (UGent) , Jan Baetens (UGent) , Olivier De Clerck (UGent) and Willem Stock (UGent)

(2023) SCIENCE OF THE TOTAL ENVIRONMENT. 876.
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- open access
Highly divergent CRESS DNA and picorna-like viruses associated with bleached thalli of the green seaweed Ulva

Luna van der Loos (UGent) , Lander De Coninck, Roland Zell, Sebastian Lequime, Anne Willems (UGent) , Olivier De Clerck (UGent) and Jelle Matthijnssens

(2023) MICROBIOLOGY SPECTRUM. 11(5).
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Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring

Alex David Rogers, Hannah Appiah-Madson, Jeff A. Ardron, Nicholas J. Bax, Punyasloke Bhadury, Angelika Brandt, Pier-Luigi Buttigieg, Olivier De Clerck (UGent) , Cláudia Delgado (UGent) , Daniel L. Distel, et al.

(2023) FRONTIERS IN MARINE SCIENCE. 10.
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- Miscellaneous
Nog een portie kroketten met kelp, graag

Olivier De Clerck (UGent) , Jessica Knoop (UGent) , Loes Vandecasteele (UGent) and Tom Ysebaert

(2022) In De Standaard p.9-9
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- A1
- open access
Auxin’s origin : do PILS hold the key?

Kenny Bogaert (UGent) , Jonas Blomme (UGent) , Tom Beeckman (UGent) and Olivier De Clerck (UGent)

(2022) TRENDS IN PLANT SCIENCE. 27(3). p.227-236
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- Miscellaneous
De nieuwe goudkoorts : iedereen aan de wierenkweek

Guido Krijger, Olivier De Clerck (UGent) , Margriet Drouillon (UGent) , Sander Steenacker, Klaas Timmermans and Stephanie De Smedt

(2022) In De Tijd p.49-51
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- Journal Article
- A1
Dictyota pulvinata sp. nov. (Dictyotaceae) a new Indo-Atlantic brown algae

M. Sadeghi, J. Sohrabipour, B. A. Fakheri, R. Rabiei, M. M. Faghihi, A. Emamjomeh, M. Rahnamaeian and Olivier De Clerck (UGent)

(2022) IRANIAN JOURNAL OF FISHERIES SCIENCES. 21(1). p.122-140
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Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

Xiaojie Liu (UGent) , Jonas Blomme (UGent) , Kenny Bogaert (UGent) , Sofie D'hondt (UGent) , Thomas Wichard, Dieter Deforce (UGent) , Filip Van Nieuwerburgh (UGent) and Olivier De Clerck (UGent)

(2022) BMC PLANT BIOLOGY. 22(1).
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Phylotranscriptomic insights into a Mesoproterozoic-Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Zheng Hou, Xiaoya Ma, Xuan Shi, Xi Li, Lingxiao Yang, Shuhai Xiao, Olivier De Clerck (UGent) , Frédérik Leliaert (UGent) and Bojian Zhong

(2022) NATURE COMMUNICATIONS. 13(1).
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- Journal Article
- A1
Seaweeds as a promising resource for blue economy development in Tunisia : current state, opportunities, and challenges

Leila Ktari, Leila Chebil Ajjabi, Olivier De Clerck (UGent) , Juan Luis Gomez Pinchetti and Celine Rebours

(2022) JOURNAL OF APPLIED PHYCOLOGY. 34(1). p.489-505
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Revisiting the systematics of the genera Grateloupia, Phyllymenia, and Prionitis (Halymeniaceae, Rhodophyta) with a description of a new species-Prionitis taiwani-borealis

Conxi Rodriguez-Prieto, Olivier De Clerck (UGent) , Michael D. Guiry and Showe-Mei Lin

(2022) JOURNAL OF PHYCOLOGY. 58(2). p.234-250
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Loss of a globally unique kelp forest from Oman

M. A. Coleman, M. Reddy, M. J. Nimbs, A. Marshell, S. A. Al-Ghassani, J. J. Bolton, B. P. Jupp, Olivier De Clerck (UGent) , Frédérik Leliaert (UGent) , C. Champion, et al.

(2022) SCIENTIFIC REPORTS. 12(1).
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Ancient Tethyan vicariance and long-distance dispersal drive global diversification and cryptic speciation in the red seaweed Pterocladiella

Ga Hun Boo, Frédérik Leliaert (UGent) , Line Le Gall, Eric Coppejans (UGent) , Olivier De Clerck (UGent) , Tu Van Nguyen, Claude E. Payri, Kathy Ann Miller and Hwan Su Yoon

(2022) FRONTIERS IN PLANT SCIENCE. 13.
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Phylogenetic position of Newhousia (Dictyotales, Phaeophyceae) and the description of N. sumayensis sp. nov. from Guam

Christophe Vieira (UGent) , Tom Schils, Hiroshi Kawai, Sofie D'hondt (UGent) , Monica O. Paiano, Alison R. Sherwood, Olivier De Clerck (UGent) and Mayalen Zubia

(2022) PHYCOLOGIA. 61(3). p.255-264
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- Journal Article
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Global biodiversity patterns of marine forests of brown macroalgae

Eliza Fragkopoulou, Ester A. Serrao, Olivier De Clerck (UGent) , Mark J. Costello, Miguel B. Araujo, Carlos M. Duarte, Dorte Krause-Jensen and Jorge Assis

(2022) GLOBAL ECOLOGY AND BIOGEOGRAPHY. 31(4). p.636-648
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Valorization of the chemical diversity of the tropical red seaweeds Acanthophora and Kappaphycus and their applications in aquaculture : a review

Paul O. Guillen, Pierfrancesco Motti (UGent) , Sven Mangelinckx (UGent) , Olivier De Clerck (UGent) , Peter Bossier (UGent) and Sofie Van den Hende

(2022) FRONTIERS IN MARINE SCIENCE. 9.
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An appraisal of Ulva (Ulvophyceae, Chlorophyta) taxonomy

Lan-Anh T. Tran (UGent) , Christophe Vieira (UGent) , Sophie Steinhagen, Christine A. Maggs, Masanori Hiraoka, Satoshi Shimada, Tu Van Nguyen, Olivier De Clerck (UGent) and Frederik Leliaert

(2022) JOURNAL OF APPLIED PHYCOLOGY. 34(5). p.2689-2703
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- Miscellaneous
Eerste oogst gekweekt Noordzeewier op komst

Olivier De Clerck (UGent)

(2021) In De Morgen p.20-20
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Smakelijk : voor het eerst eetbaar zeewier uit de Noordzee

Olivier De Clerck (UGent) and Jessica Knoop (UGent)

(2021) In Het Nieuwsblad p.11-11
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Morphological and molecular assessment of Grateloupia (Halymeniales, Rhodophyta) from Egypt revealed a new introduced species in the Mediterranean Sea, Grateloupia gibbesii

Conxi Rodriguez-Prieto, Soha Hamdy Shabaka, Nihal Shams El-Din and Olivier De Clerck (UGent)

(2021) PHYCOLOGIA. 60(1). p.83-95
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A molecular toolkit for the green seaweed Ulva mutabilis

Jonas Blomme (UGent) , Xiaojie Liu (UGent) , Thomas B. Jacobs (UGent) and Olivier De Clerck (UGent)

(2021) PLANT PHYSIOLOGY. 186(3). p.1442-1454
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- PhD Thesis
Genetics of reproduction and sex determination in the green seaweed Ulva

Xiaojie Liu (UGent)

(2021)
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Dictyota cyanoloma (Dictyotales, Phaeophyceae), a newly introduced brown algal species in California(1)

Lan-Anh T. Tran, Quinten Bafort (UGent) , Frederique Steen, Amelia Gomez Garreta, Sofie D'hondt (UGent) , Kathy Ann Miller, Sofie Vranken (UGent) , Ante Zuljevic, Jennifer E. Smith and Olivier De Clerck (UGent)

(2021) JOURNAL OF PHYCOLOGY. 57(1). p.370-378
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Marine macroalgal biodiversity of northern Madagascar : morpho-genetic systematics and implications of anthropic impacts for conservation

Christophe Vieira (UGent) , Antoine De Ramon N'Yeurt, Faravavy A. Rasoamanendrika, Sofie D'hondt (UGent) , Lan-Anh T. Tran (UGent) , Didier Van den Spiegel, Hiroshi Kawai and Olivier De Clerck (UGent)

(2021) BIODIVERSITY AND CONSERVATION. 30(5). p.1501-1546
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Impacts of environmental stress on resistance and resilience of algal-associated bacterial communities

Kathryn Morrissey, Ljiljana Ivesa, Soria Delva (UGent) , Sofie D'hondt (UGent) , Anne Willems (UGent) and Olivier De Clerck (UGent)

(2021) ECOLOGY AND EVOLUTION. 11(21). p.15004-15019
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Characterizing algal microbiomes using long-read nanopore sequencing

Luna van der Loos (UGent) , Sofie D'hondt (UGent) , Anne Willems (UGent) and Olivier De Clerck (UGent)

(2021) ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS. 59.
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Lobophora (Dictyotales, Phaeophyceae) from the western Indian Ocean : diversity and biogeography

Christophe Vieira (UGent) , Faravavy A. Rasoamanendrika, Mayalen Zubia, John J. Bolton, Robert J. Anderson, Aschwin H. Engelen, Sofie D'Hondt, Frédérik Leliaert (UGent) , Claude Payri, Hiroshi Kawai, et al.

(2021) SOUTH AFRICAN JOURNAL OF BOTANY. 142. p.230-246
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Global biogeography and diversification of a group of brown seaweeds (Phaeophyceae) driven by clade-specific evolutionary processes

Christophe Vieira (UGent) , Frederique Steen, Sofie D'hondt (UGent) , Quinten Bafort (UGent) , Lennert Tyberghein, Cindy Fernandez-Garcia, Brian Wysor, Ana Tronholm, Lydiane Mattio, Claude Payri, et al.

(2021) JOURNAL OF BIOGEOGRAPHY. 48(4). p.703-715
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French Mediterranean and Atlantic populations of the brown algal genus Taonia (Dictyotales) display differences in phylogeny, surface metabolomes and epibacterial communities

Benoit Paix, Christophe Vieira (UGent) , Philippe Potin, Catherine Leblanc, Olivier De Clerck (UGent) , Jean-Francois Briand and Gerald Culioli

(2021) ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS. 59.
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Are well-studied marine biodiversity hotspots still blackspots for animal barcoding?

Francesco Mugnai, Emese Meglecz, Federica Costantini, Marco Abbiati, Giorgio Bavestrello, Fabio Bertasi, Marzia Bo, Maria Capa, Anne Chenuil, Marina Antonia Colangelo, et al.

(2021) GLOBAL ECOLOGY AND CONSERVATION. 32.
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- Conference Paper
- C3
H2020 UNITED : is scour protection suitable for flat oyster restoration in Belgium?

Annelies Declercq (UGent) , Thomas Kerkhove, Brecht Stechele (UGent) , Ajie Brama Krishna Pribadi (UGent) , Bert Groenendaal, Dirk Vandercammen, Elisabete Pinto da Silva, Evert Lataire (UGent) , Emile Lemey, Frank Maes (UGent) , et al.

(2021) p.48-48

Embracing algal models

Evolution, biology, and genetics of seaweeds

Ulva : an emerging green seaweed model for systems biology

Studying whole-genome duplication using experimental evolution of Chlamydomonas

Responding to a warming ocean : a case study of the brown seaweed Dictyota dichotoma

Molecular assessment of Ulva (Ulvales, Chlorophyta) diversity in Vietnam including the new species U. vietnamensis

Polarization of brown algal zygotes

Tracing the introduction of Dictyota acutiloba (Dictyotales, Phaeophyceae) in the Mediterranean Sea, with a reassessment of its geographic distribution

AlgaeTraits : a trait database for (European) seaweeds

First records of the non-indigenous green algal species Siphonocladus tropicus (Cladophorales, Chlorophyta) and Caulerpa integerrima (Bryopsidales, Chlorophyta) in the Mediterranean Sea

Marine biodiversity exposed to prolonged and intense subsurface heatwaves

Phylotranscriptomics unveil a Paleoproterozoic-Mesoproterozoic origin and deep relationships of the Viridiplantae

Diversity, systematics and biogeography of French Polynesian Lobophora (Dictyotales, Phaeophyceae)

The immediate effects of polyploidization of Spirodela polyrhiza change in a strain-specific way along environmental gradients

Warming and nutrient enrichment can trigger seaweed loss by dysregulation of the microbiome structure and predicted function

Marine flora of French Polynesia : an updated list using DNA barcoding and traditional approaches

Non-indigenous seaweeds in the Northeast Atlantic Ocean, the Mediterranean Sea and Macaronesia: a critical synthesis of diversity, spatial and temporal patterns

Range-edge populations of seaweeds show niche unfilling and poor adaptation to increased temperatures

Salinity and host drive Ulva-associated bacterial communities across the Atlantic–Baltic Sea gradient

No bacterial-mediated alleviation of thermal stress in a brown seaweed suggests the absence of ecological bacterial rescue effects

Highly divergent CRESS DNA and picorna-like viruses associated with bleached thalli of the green seaweed Ulva

Accelerating ocean species discovery and laying the foundations for the future of marine biodiversity research and monitoring

Nog een portie kroketten met kelp, graag

Auxin’s origin : do PILS hold the key?

De nieuwe goudkoorts : iedereen aan de wierenkweek

Dictyota pulvinata sp. nov. (Dictyotaceae) a new Indo-Atlantic brown algae

Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

Phylotranscriptomic insights into a Mesoproterozoic-Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Seaweeds as a promising resource for blue economy development in Tunisia : current state, opportunities, and challenges

Revisiting the systematics of the genera Grateloupia, Phyllymenia, and Prionitis (Halymeniaceae, Rhodophyta) with a description of a new species-Prionitis taiwani-borealis

Loss of a globally unique kelp forest from Oman

Ancient Tethyan vicariance and long-distance dispersal drive global diversification and cryptic speciation in the red seaweed Pterocladiella

Phylogenetic position of Newhousia (Dictyotales, Phaeophyceae) and the description of N. sumayensis sp. nov. from Guam

Global biodiversity patterns of marine forests of brown macroalgae

Valorization of the chemical diversity of the tropical red seaweeds Acanthophora and Kappaphycus and their applications in aquaculture : a review

An appraisal of Ulva (Ulvophyceae, Chlorophyta) taxonomy

Eerste oogst gekweekt Noordzeewier op komst

Smakelijk : voor het eerst eetbaar zeewier uit de Noordzee

Morphological and molecular assessment of Grateloupia (Halymeniales, Rhodophyta) from Egypt revealed a new introduced species in the Mediterranean Sea, Grateloupia gibbesii

A molecular toolkit for the green seaweed Ulva mutabilis

Genetics of reproduction and sex determination in the green seaweed Ulva

Dictyota cyanoloma (Dictyotales, Phaeophyceae), a newly introduced brown algal species in California(1)

Marine macroalgal biodiversity of northern Madagascar : morpho-genetic systematics and implications of anthropic impacts for conservation

Impacts of environmental stress on resistance and resilience of algal-associated bacterial communities

Characterizing algal microbiomes using long-read nanopore sequencing

Lobophora (Dictyotales, Phaeophyceae) from the western Indian Ocean : diversity and biogeography

Global biogeography and diversification of a group of brown seaweeds (Phaeophyceae) driven by clade-specific evolutionary processes

French Mediterranean and Atlantic populations of the brown algal genus Taonia (Dictyotales) display differences in phylogeny, surface metabolomes and epibacterial communities

Are well-studied marine biodiversity hotspots still blackspots for animal barcoding?

H2020 UNITED : is scour protection suitable for flat oyster restoration in Belgium?