Ghent University Academic Bibliography

Journal Article
A1
open access

A quantitative genetic analysis of size-related traits in cultivated sugar kelp (Saccharina latissima)

S. Bråtelund, J. Ødegård, G. Klemetsdal, Tom Ruttink (UGent) and Å. Ergon

(2026) AQUACULTURE. 611.

Journal Article
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open access

Genetic transmission, self-fertilization, apomixis and triploidy in mixed hybridizations of sugar kelp (Saccharina latissima)

S. Bråtelund, Tom Ruttink (UGent) , F. Goecke, G. Klemetsdal, S. Forbord, J. Skjermo, D. Aldridge, A.R. Borrero-Santiago, J. Ødegård, J. Funderud, et al.

(2026) AQUACULTURE. 610.

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Mediated electron transfer in five prevalent human oral microbial species

David Hernandez Villamor (UGent) , Aya Jeaidi (UGent) , Riet Boydens (UGent) , Korneel Rabaey (UGent) , Tom Van de Wiele (UGent) and Antonin Prévoteau (UGent)

(2026) BIOELECTROCHEMISTRY. 168.

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Improving transport efficiency for large human cells for enabling accurate determination of cellular nanoparticle uptake via SC-ICP-TOF-MS

Mina Nikolić (UGent) , Ana Lores Padín (UGent) , Thibaut Van Acker (UGent) , Tina Smets, Ilia Goemaere (UGent) , Amin Ahmad (UGent) , Kevin Braeckmans (UGent) , Eduardo Bolea Fernandez (UGent) and Frank Vanhaecke (UGent)

(2026) TALANTA. 297(part B).

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Journal Article
A1
open access

Enhancing glycopeptide annotation and glycan localization using electron activated dissociation through a multiplexed parallel reaction monitoring design of experiments

Hiba Salim, Ruben Almey (UGent) , Laura Pont, Fernando Benavente, Maarten Dhaenens (UGent) and Estela Giménez

(2026) JOURNAL OF PROTEOMICS. 322.

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Journal Article
A1
open access

Integrated metabolomic and transcriptomic analysis to elucidate the antifungal and antimycotoxin mechanisms of natural stilbenoids against Fusarium graminearum

Trang Tran Minh (UGent) , Nadia Ponts, Stéphane Bernillon, Pierre Waffo-Téguo, Caroline Rouger, Florence Richard-Forget and Vessela Atanasova

(2026) MICROBIOLOGICAL RESEARCH. 303.

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PhD Thesis

The influence of forest structural complexity on ticks, hosts, and pathogen prevalence

Tosca Vanroy (UGent)

(2025)

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Journal Article
A1
open access

Diversity of mycotoxins in stored paddy rice : contamination patterns in the Mekong Delta, Vietnam

Lien Thi Kim Phan, Thuy Thi Ngoc Nguyen, Thien Thi Thanh Tran and Sarah De Saeger (UGent)

(2025) TOXINS. 17(1).

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Bridging the diversity between 16S rRNA amplicon sequencing and cultivation studies

Michiel Van de Vliet (UGent) , Charlotte Peeters (UGent) , Margo Cnockaert (UGent) , Lisa Joos (UGent) , Marie Joossens (UGent) and Peter Vandamme (UGent)

(2025) BSM Annual Symposium 2025, Abstracts. p.139-139

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Novel iminosugar enzymes and products through metagenomics

Anne-Sofie De Rop (UGent) , Maarten De Mol (UGent) , Sofie De Maeseneire (UGent) , Inari Willems (UGent) , Marieke Mispelaere, Paco Hulpiau (UGent) and Wim Soetaert (UGent)

(2025) BSM Annual Symposium 2025, Abstracts.

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Glycolipid amphiphiles produced by Starmerella bombicola as multifunctional preservatives : opportunities and challenges

Martijn Castelein (UGent) , Sophie Roelants (UGent) and Wim Soetaert (UGent)

(2025) BSM Annual Symposium 2025, Abstracts.

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Skin microbiome-editing with novel antibiotics towards lower mosquito attraction

Magali De Muynck (UGent) , Joni Bert (UGent) , Roberto Vázquez (UGent) , Chris Callewaert (UGent) , Marie Joossens (UGent) and Yves Briers (UGent)

(2025) BSM Annual Symposium 2025, Abstracts.

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Journal Article
A1
open access

Role of astrocytes and microglia in hepatic encephalopathy associated with advanced chronic liver disease : lessons from animal studies

Wouter Claeys (UGent) , Anja Geerts (UGent) , Lien Van Hoecke (UGent) , Christophe Van Steenkiste and Roosmarijn Vandenbroucke (UGent)

(2025) NEURAL REGENERATION RESEARCH. 20(12). p.3461-3475

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PhD Thesis

Investigating protein flexibility using molecular dynamics simulations of α-1 acid glycoprotein and large-scale normal mode analysis of AlphaFold models

Bhawna Dixit (UGent)

(2025)

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PhD Thesis

Inference and evolutionary significance of ancient polyploidy in plants

Hengchi Chen (UGent)

(2025)

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PhD Thesis

Towards rice multibiofortification : uncovering and engineering vitamins B1 and B2 pathways

Maria Vicente Faustino (UGent)

(2025)

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PhD Thesis

Myxovirus resistance (Mx) interacting proteins

Georgios Moschonas (UGent)

(2025)

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Journal Article
A1
open access

Expanding the genetic landscape of Usher syndrome type IV caused by pathogenic ARSG variants

Miriam Bauwens (UGent) , Vincent De Man, Isabelle Audo, Irina Balikova, Wadih M. Zein, Vasily Smirnov, Sebastian Held, Sascha Vermeer, Elke Loos, Julie Jacob, et al.

(2025) CLINICAL GENETICS. 107(1). p.44-55

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Poly(2-alkyl-2-oxazoline) hydrogels as synthetic matrices for multicellular spheroid and intestinal organoid cultures

Robin Vanhoeijen (UGent) , Irina Okkelman (UGent) , Nette Rogier, Tomáš Sedlačík (UGent) , Daniel Stöbener (UGent) , Bert Devriendt (UGent) , Ruslan Dmitriev (UGent) and Richard Hoogenboom (UGent)

(2025) BIOMACROMOLECULES. 26(3). p.1860-1872

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Journal Article
A1
open access

Folate depletion impact on the cell cycle results in restricted primary root growth in Arabidopsis

Jolien De Lepeleire, Ratnesh Mishra (UGent) , Jana Verstraete, José Antonio Pedroza-Garcia (UGent) , Christophe Stove (UGent) , Lieven De Veylder (UGent) and Dominique Van Der Straeten (UGent)

(2025) PLANT MOLECULAR BIOLOGY. 115(2).

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Journal Article
A1
open access

NF-κB regulated expression of A20 controls IKK dependent repression of RIPK1 induced cell death in activated T cells

By Scott Layzell, Alessandro Barbarulo, Geert van Loo (UGent) , Rudi Beyaert (UGent) and Benedict Seddon

(2025) CELL DEATH AND DIFFERENTIATION. 32(2). p.256-270

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Journal Article
A1
open access

Unlocking saponin biosynthesis in soapwort

Seohyun Jo, Amr El-Demerdash, Charlotte Owen, Vikas Srivastava, Dewei Wu, Shingo Kikuchi, James Reed, Hannah Hodgson, Alex Harkess, Shengqiang Shu, et al.

(2025) NATURE CHEMICAL BIOLOGY. 21(2). p.215-226

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Journal Article
A1
open access

The pseudorabies virus UL13 protein kinase triggers phosphorylation of the RNA demethylase FTO, which is associated with FTO-dependent suppression of interferon-stimulated gene expression

Ruth Verhamme (UGent) , Robert Jansens (UGent) , Jianheng Liu, Fien Van Raemdonck (UGent) , Cliff Van Waesberghe (UGent) , Luke Nicholson, Samie R. Jaffrey and Herman Favoreel (UGent)

(2025) JOURNAL OF VIROLOGY. 99(2).

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Journal Article
A2
open access

False positive hCG testing and upper urinary tract infection

Joris Delanghe (UGent) , Valerie Pede (UGent) , Sylvie Mulliez, Hilde Vanpoucke, Marijn Speeckaert (UGent) , Danielle Vandenweghe and Kris Gevaert (UGent)

(2025) HORMONE MOLECULAR BIOLOGY AND CLINICAL INVESTIGATION.

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Journal Article
A1
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A colourful world with a dark future : unregulated trade as an emerging threat for woodlice (Isopoda: Oniscidea) of Spain

Jairo Robla, Raúl Orihuela‐Rivero, Pallieter De Smedt (UGent) , Marcos Matarredona and Lluc Garcia

(2025) INSECT CONSERVATION AND DIVERSITY. 18(2). p.161-176

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Superficial circumflex iliac artery (SCIA) perforator flap for shaft-only phalloplasty : surgical technique and outcomes

Kristin B. de Haseth, Danny A. Young-Afat, Sterre E. Mokken, Floyd W. S. Timmermans, Marlon Buncamper (UGent) , Matthijs Botman, Brechje L. Ronkes, Garry L. S. Pigot, Mark-Bram Bouman and Wouter B. Vd Sluis

(2025) INTERNATIONAL JOURNAL OF TRANSGENDER HEALTH.

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Journal Article
A1
open access

Novel adaptive immune systems in pristine Antarctic soils

Marc W. Van Goethem, Oliver K. I. Bezuidt, Rian Pierneef, Surendra Vikram, David W. Hopkins, Thomas Aspray, Grant Hall, Stephan Woodborne, Ian D. Hogg, Trent R. Northen, et al.

(2025) SCIENTIFIC REPORTS. 15(1).

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Journal Article
A1
open access

Pupylation-based proximity labeling reveals regulatory factors in cellulose biosynthesis in Arabidopsis

Shuai Zheng, Lise C. Noack, Ouda Khammy, Andreas De Meyer (UGent) , Ghazanfar Abbas Khan, Nancy De Winne (UGent) , Dominique Eeckhout (UGent) , Daniël Van Damme (UGent) and Staffan Persson

(2025) NATURE COMMUNICATIONS. 16(1).

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Journal Article
A1
open access

doubletrouble : an R/Bioconductor package for the identification, classification, and analysis of gene and genome duplications

Fabricio De Almeida Silva (UGent) and Yves Van de Peer (UGent)

(2025) BIOINFORMATICS. 41(2).

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Journal Article
A1
open access

Gonadal function and pathology in 17beta-HSD 3 and 5alpha-reductase deficiency

LS Boogers, HT Bruggenwirth, KP Wolffenbuttel, R Hersmus, J Bryce, SF Ahmed, AK Lucas-Herald, F Baronio, Martine Cools (UGent) , M Ellaithi, et al.

(2025) EUROPEAN JOURNAL OF ENDOCRINOLOGY. 192(1). p.34-45

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Seabed microplastics in the European continental shelf : unravelling physical and biological transport pathways and reciprocal fauna–polymer relationships

Gabriella Pantò (UGent) , Ann Vanreusel (UGent) , Maaike Vercauteren (UGent) , Jana Asselman (UGent) and Carl Van Colen (UGent)

(2025) ENVIRONMENTAL POLLUTION. 365.

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Journal Article
A1
open access

The use of miniaturised bluetooth low energy proximity loggers to study contacts among small rodents in agricultural settings

Florian Huels, Bram Vanden Broecke (UGent) , Vincent Sluydts, Lucinda Kirkpatrick, Ivan Herrera Olivares, Hendrik Ennen, Dries Vermeiren, Herwig Leirs and Jens Jacob

(2025) PLOS ONE. 20(1).

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Journal Article
A1
open access

Prevalence and clinical correlates of Gardnerella spp., Fannyhessea vaginae, Lactobacillus crispatus and L. iners in pregnant women in Bukavu, Democratic Republic of the Congo

Lisa Himschoot (UGent) , Guy Mulinganya, Tess Rogier (UGent) , Ghislain Bisimwa, Freddy Kampara, Yvette Kujirakwinja, Jules Mongane, Innocent Mubalama, Steven Callens (UGent) , Mario Vaneechoutte (UGent) , et al.

(2025) FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 14.

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Journal Article
A1
open access

PTMVision : an interactive visualization webserver for post-translational modifications of proteins

Simon Hackl, Caroline Jachmann (UGent) , Mathias Witte Paz, Theresa Anisja Harbig, Lennart Martens (UGent) and Kay Nieselt

(2025) JOURNAL OF PROTEOME RESEARCH. 24(2). p.919-928

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Journal Article
A1
open access

Exploring the tomato root protein network exploited by core type 3 effectors from the Ralstonia solanacearum species complex

Joren De Ryck (UGent) , Veronique Jonckheere (UGent) , Brigitte De Paepe, Annick De Keyser (UGent) , Nemo Peeters, Johan Van Vaerenbergh, Jane Debode (UGent) , Petra Van Damme (UGent) and Sofie Goormachtig (UGent)

(2025) JOURNAL OF PROTEOME RESEARCH. 24(2). p.696-709

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Journal Article
A1
open access

Early detection of OXA-48 producing Klebsiella pneumoniae with the use of rapid antibiotic susceptibility testing

Emilie De Muynck, Stien Vandendriessche (UGent) , Anne-Sophie Messiaen (UGent) , Kristen Decommer, Diana Huis in 't Veld (UGent) , Jan De Waele (UGent) and Jerina Boelens (UGent)

(2025) EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES. 44. p.729-732

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Journal Article
A1
open access

Cell and transcriptomic diversity of infrapatellar fat pad during knee osteoarthritis

Hayley Peters, Pratibha Potla, Jason S. Rockel, Teodora Tockovska, Chiara Pastrello, Igor Jurisica, Keemo Delos Santos, Shabana Vohra, Noah Fine, Starlee Lively, et al.

(2025) ANNALS OF THE RHEUMATIC DISEASES. 84(2). p.351-367

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Journal Article
A1
open access

Asymmetric genome merging leads to gene expression novelty through nucleo‐cytoplasmic disruptions and transcriptomic shock in Chlamydomonas triploids

Lucas Prost Boxoen (UGent) , Quinten Bafort (UGent) , Antoine Van de Vloet (UGent) , Fabricio De Almeida Silva (UGent) , Yunn Thet Paing (UGent) , Griet Casteleyn (UGent) , Sofie D'hondt (UGent) , Olivier De Clerck (UGent) and Yves Van de Peer (UGent)

(2025) NEW PHYTOLOGIST. 245(22). p.869-884

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Journal Article
A1
open access

A VersaTile approach to reprogram the specificity of the R2-type tailocin towards different serotypes of Escherichia coli and Klebsiella pneumoniae

Dorien Dams (UGent) , Célia Pas (UGent) , Agnieszka Łątka (UGent) , Zuzanna Drulis-Kawa, Lars Fieseler and Yves Briers (UGent)

(2025) ANTIBIOTICS-BASEL. 14(1).

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Journal Article
A2
open access

Endogenous HiBiT-tagging combined with affinity complementation : a new strategy for small open reading frame-encoded polypeptide detection in bacteria

Laure Simoens (UGent) , Veronique Jonckheere (UGent) , Dominiek Catteeuw (UGent) and Petra Van Damme (UGent)

(2025) ADVANCES IN SAMPLE PREPARATION. 13.

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Journal Article
A1
open access

Unravelling the hidden side of laundry : malodour, microbiome and pathogenome

Celia Diez Lopez (UGent) , Florence Van Herreweghen (UGent) , Britta De Pessemier (UGent) , Yorick Minnebo (UGent) , Steff Taelman (UGent) , Kara Judge, Karen Ransley, Christopher Hammond, Matthew Batson, Michiel Stock (UGent) , et al.

(2025) BMC BIOLOGY. 23(1).

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PhD Thesis

Exploration and engineering of dehydratases and epimerases for the biocatalytic synthesis of nucleotide diphosphate deoxy sugars

Ulrike Vogel (UGent)

(2025)

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PhD Thesis

The small intestinal redox status and its bioenergetics in piglets during the weaning transition

Yuhuang Hou (UGent)

(2025)

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PhD Thesis

Structural basis for pro-inflammatory signaling and antagonism of cytokine-receptor complexes within the IL-1 family

Julie Andries (UGent)

(2025)

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Comparative environmental impact of chitosan extraction methods from shrimp waste

Pouya Mohammadi (UGent) , Zahra Khounani, Homa Hosseinzadeh-Bandbafha, Shin Ying Foong, Mohd Azman Yusoff, Hossein Shahbeik, Normy Norfiza Abdul Razak, Su Shiung Lam, Sheikh Ahmad Faiz Sheikh Ahmad Tajuddin, Mortaza Aghbashlo, et al.

(2025) JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING. 13(1).

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Journal Article
A1
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PPARα-ERRα crosstalk mitigates metabolic dysfunction-associated steatotic liver disease progression

Milton Boaheng Antwi (UGent) , Sander Lefere (UGent) , Dorien Clarisse (UGent) , Lisa Koorneef (UGent) , Anneleen Heldens (UGent) , Louis Onghena (UGent) , Kylian Decroix (UGent) , Daria Fijalkowska (UGent) , Jonathan Thommis (UGent) , Madeleine Hellemans (UGent) , et al.

(2025) METABOLISM-CLINICAL AND EXPERIMENTAL. 164.

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