Ghent University Academic Bibliography

Journal Article
A1
open access

Multiple mycotoxin exposure assessment through human biomonitoring in an esophageal cancer case-control study in the Arsi-Bale districts of Oromia region of Ethiopia

Girma Mulisa, Roger Peró Gascón (UGent) , Valerie McCormack, Jordan E. Bisanz, Fazlur Rahman Talukdar, Tamrat Abebe, Marthe De Boevre (UGent) and Sarah De Saeger (UGent)

(2025) INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH. 263.

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Near-infrared microscopy reveals diabetic nephropathy in ob/ob mice

Charlotte Delrue (UGent) , Mieke Steenbeke, Henk Vrielinck (UGent) , Wim Derave (UGent) , Inge Everaert (UGent) , Joris Delanghe (UGent) , Hans Baelde, Sander De Bruyne (UGent) and Marijn Speeckaert (UGent)

(2025) TALANTA. 282.

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Systematic analysis of an integrated ultraviolet pretreatment and mixotrophic denitrification system : insights into carbon, sulfur, and nitrogen metabolism, microbial community dynamics, and the fate of antibiotic resistance genes

Yue Chen (UGent) , Yang-Guo Zhao, Yishun Zhu, Progress Mupindu and Di Wu (UGent)

(2025) CHEMICAL ENGINEERING JOURNAL. 503.

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Journal Article
A1
open access

SpatialData : an open and universal data framework for spatial omics

Luca Marconato, Giovanni Palla, Kevin A. Yamauchi, Isaac Virshup, Elyas Heidari, Tim Treis, Wouter-Michiel Vierdag, Marcella Toth, Sonja Stockhaus, Rahul B. Shrestha, et al.

(2025) NATURE METHODS. 22(1). p.58-62

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Journal Article
A1
open access

Action potential threshold variability for different electrostimulation models and its potential impact on occupational exposure limit values

Florian Soyka, Thomas Tarnaud (UGent) , Carsten Altekoester, Ruben Schoeters (UGent) , Tom Plovie (UGent) , Wout Joseph (UGent) and Emmeric Tanghe (UGent)

(2025) BIOELECTROMAGNETICS. 46(1).

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Biological switches : past and future milestones of transcription factor-based biosensors

Brecht De Paepe (UGent) and Marjan De Mey (UGent)

(2025) ACS SYNTHETIC BIOLOGY. 14(1). p.72-86

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Sperm cryopreservation and reproductive characteristics in the beauty snake (Elaphe taeniura) as a model for endangered Colubridae

Penelope Banchi (UGent) , Ferran Solanes Vilanova (UGent) , Mattia Cesauri, Lotte Spanoghe (UGent) , Koen Chiers (UGent) , Ann Van Soom (UGent) , Tom Hellebuyck (UGent) and Guilherme Rizzoto (UGent)

(2025) CRYOBIOLOGY. 118.

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Comparison of serum microRNA in healthy horses and horses with moderate to severe mitral valve regurgitation using a commercially available canine cardiac panel

Amber Calewaert, Javier Palarea-Albaladejo, Robert Coultous, Paul Capewell, Eve Hanks, Annelies Decloedt (UGent) and Gunther van Loon (UGent)

(2025) EQUINE VETERINARY JOURNAL.

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Book Chapter

Proteomics-based analysis of laser-capture micro-dissected, formalin-fixed paraffin-embedded tissue samples

Teresa Maia (UGent) , Delphi Van Haver (UGent) , Sara Dufour (UGent) , Malaïka Van der Linden (UGent) , Amélie Dendooven (UGent) , Francis Impens (UGent) and Simon Devos (UGent)

(2025) Tissue Proteomics : Methods and Protocols. In Methods in Molecular Biology 2884. p.333-354

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Journal Article
A1
open access

Solu : a cloud platform for real-time genomic pathogen surveillance

Timo Saratto, Kerkko Visuri, Jonatan Lehtinen, Irene Ortega Sanz (UGent) , Jacob L. Steenwyk and Samuel Sihvonen

(2025) BMC BIOINFORMATICS. 26(1).

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Journal Article
A1
open access

Machine learning reveals novel compound for the improved production of chitooligosaccharides in Escherichia coli

Friederike Mey, Gaetan De Waele (UGent) , Wouter Demeester (UGent) , Chiara Guidi (UGent) , Dries Duchi (UGent) , Tomek Diederen, Hanne Kochuyt, Kirsten Van Huffel, Nicola Zamboni, Willem Waegeman (UGent) , et al.

(2025) NEW BIOTECHNOLOGY. 86. p.39-46

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Journal Article
A1
open access

Small-angle X-ray scattering of engineered antigen-binding fragments : the case of glycosylated Fab from the Mannitou IgM antibody

Shubham Semwal (UGent) , Maria Karamolegkou (UGent) , Stéphanie Flament, Nessim Raouraoua, Kenneth Verstraete (UGent) , Aurélien Thureau, Frank Wien, Fabrice Bray, Savvas Savvides (UGent) and Julie Bouckaert

(2025) ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS. 81(Pt 1). p.19-29

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Comparative environmental impact of chitosan extraction methods from shrimp waste

Pouya Mohammadi (UGent) , Zahra Khounani, Homa Hosseinzadeh-Bandbafha, Shin Ying Foong, Mohd Azman Yusoff, Hossein Shahbeik, Normy Norfiza Abdul Razak, Su Shiung Lam, Sheikh Ahmad Faiz Sheikh Ahmad Tajuddin, Mortaza Aghbashlo, et al.

(2025) JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING. 13(1).

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Journal Article
A1
open access

PPARα-ERRα crosstalk mitigates metabolic dysfunction-associated steatotic liver disease progression

Milton Boaheng Antwi (UGent) , Sander Lefere (UGent) , Dorien Clarisse (UGent) , Lisa Koorneef (UGent) , Anneleen Heldens (UGent) , Louis Onghena (UGent) , Kylian Decroix (UGent) , Daria Fijalkowska (UGent) , Jonathan Thommis (UGent) , Madeleine Hellemans (UGent) , et al.

(2025) METABOLISM-CLINICAL AND EXPERIMENTAL. 164.

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Journal Article
A1
open access

CytoNorm 2.0 : a flexible normalization framework for cytometry data without requiring dedicated controls

Katrien Quintelier (UGent) , Marcella Willemsen, Victor Bosteels (UGent) , Joachim G. J. V. Aerts, Yvan Saeys (UGent) and Sofie Van Gassen (UGent)

(2025) CYTOMETRY PART A.

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Journal Article
A1
open access

Glycomics as prognostic biomarkers of hepatocellular carcinoma : a systematic review

Nicky Somers (UGent) , Emma Butaye (UGent) , Lorenz Grossar (UGent) , Nele Pauwels (UGent) , Anja Geerts (UGent) , Sarah Raevens (UGent) , Sander Lefere (UGent) , Lindsey Devisscher (UGent) , Leander Meuris (UGent) , Nico Callewaert (UGent) , et al.

(2025) ONCOLOGY LETTERS. 29(1).

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Journal Article
A1
open access

A multiyear longitudinal harmonization study of quality controls in mass spectrometry proteomics core facilities

Cristina Chiva, Roger Olivella, An Staes (UGent) , Teresa Maia (UGent) , Christian Panse, Karel Stejskal, Thibaut Douché, Bérangère Lombard, Andrea Schuhmann, Damarys Loew, et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(2). p.397-409

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Miscellaneous

Unveiling the risks : protecting privacy in single-cell genomics data

Rafael Kramann, Christoph Kuppe, Valerie Luyckx, Wim Van Biesen (UGent) and Stefanie Steiger

(2025) NEPHROLOGY DIALYSIS TRANSPLANTATION.

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Journal Article
A1
open access

Effectiveness of the XBB.1.5 COVID-19 vaccines against SARS-CoV-2 hospitalisation among adults aged ≥ 65 years during the BA.2.86/JN.1 predominant period, VEBIS Hospital Study, Europe, November 2023 to May 2024

Liliana Antunes, Madelyn Rojas-Castro, Marcos Lozano, Iván Martínez-Baz, Isabel Leroux-Roels (UGent) , Maria-Louise Borg, Beatrix Oroszi, Margaret Fitzgerald, Ralf Dürrwald, Ligita Jancoriene, et al.

(2025) INFLUENZA AND OTHER RESPIRATORY VIRUSES. 19(3).

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Journal Article
A1
open access

Biofilm inhibition and eradication activity of citral and borneol against foodborne bacteria

Wen Wang, Tom Coenye (UGent) , Jianyu Su and Sheng-Xiang Qiu

(2025) INDUSTRIAL CROPS AND PRODUCTS. 223.

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Journal Article
A1
open access

A guide to germ-free and gnotobiotic mouse technology to study health and disease

Maude Jans (UGent) and Lars Vereecke (UGent)

(2025) FEBS JOURNAL. 292(6). p.1228-1251

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Journal Article
A2
open access

Combination of phages and antibiotics with enhanced killing efficacy against dual-species bacterial communities in a three-dimensional lung epithelial model

Ergun Akturk, Graca Pinto, Lisa Ostyn (UGent) , Aurélie Crabbé (UGent) , Luis D. R. Melo, Joana Azeredo and Tom Coenye (UGent)

(2025) BIOFILM. 9.

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Journal Article
A1
open access

A novel synthetic synovial fluid model for investigating biofilm formation and antibiotic susceptibility in prosthetic joint infections

Amber De Bleeckere (UGent) , Frits van Charante, Thibault Debord, Stien Vandendriessche (UGent) , Michiel De Cock, Marte Verstraete, Fabien Lamret, Bram Lories, Jerina Boelens (UGent) , Fany Reffuveille, et al.

(2025) MICROBIOLOGY SPECTRUM. 13(1).

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Journal Article
A1
open access

Evaluation of antibiofilm agents for treatment of cystic fibrosis-related chronic rhinosinusitis

Saartje Uyttebroek, Lieven Dupont, Jeroen Wagemans, Rob Lavigne, Maya Merabishvili, Tom Coenye (UGent) and Laura Van Gerven

(2025) INTERNATIONAL FORUM OF ALLERGY & RHINOLOGY. 15(1). p.73-76

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Journal Article
A1
open access

Exploration of theta burst-induced modulation of transcranial magnetic stimulation-evoked potentials over the motor cortex

Sofie Carrette (UGent) , Kristl Vonck (UGent) , Debby Klooster, Robrecht Raedt (UGent) , Evelien Carrette (UGent) , Jean Delbeke (UGent) , Wytse Wadman (UGent) , Silvia Casarotto, Marcello Massimini and Paul Boon (UGent)

(2025) NEUROMODULATION. 28(1). p.123-135

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Book Editor

An archaeology of the Bantu expansion : early settlers south of the Congo rainforest

Peter Coutros (UGent) , Igor Roland Matonda Sakala (UGent) , Jessamy Doman (UGent) and Koen Bostoen (UGent)

(2025)

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Medicinal plant use and diversity in the urban area of Idiofa, Democratic Republic of Congo

Emiel De Meyer (UGent) , Melissa Ceuterick (UGent) , Wouter Vanhove (UGent) , Jurgen Heytens, Jean Eden Mimbu, Patrick Van Damme (UGent) and Eduardo de la Pena (UGent)

(2025) JOURNAL OF ETHNOBIOLOGY. 45(1). p.38-50

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Assessment of biphasic CAPA-IVM for improving equine oocyte quality and developmental potential

Muhammad Fakhar-I-Adil (UGent) , Daniel Angel Velez (UGent) , Qurratul Ain Amin (UGent) , Mohamed Hedia (UGent) , Björn Menten (UGent) , Ann Van Soom (UGent) , Katrien Smits (UGent) and Björn Heindryckx (UGent)

(2025) REPRODUCTION FERTILITY AND DEVELOPMENT. In Reproduction, Fertility and Development 37(1).

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Journal Article
A1
open access

Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1

Hong Wei, Heyuan Zhu (UGent) , Wei Ying, Hilde Janssens (UGent) , Miroslav Kvasnica, Johan M. Winne, Yongxiang Gao, Jiří Friml, Qian Ma (UGent) , Shutang Tan, et al.

(2025) PLANT COMMUNICATIONS. 6(1).

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Journal Article
A1
open access

Toward a phylogenomic classification of magnoliids

Andrew J. Helmstetter, Zacky Ezedin, Elton John de Lírio, Sylvia M. de Oliveira, Lars Chatrou (UGent) , Roy H. J. Erkens, Isabel Larridon (UGent) , Kevin Leempoel, Olivier Maurin, Shyamali Roy, et al.

(2025) AMERICAN JOURNAL OF BOTANY. 112(1).

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Journal Article
A1
open access

Predictors of relapse risk and treatment response in AQP4-IgG positive and seronegative NMOSD : a multicentre study

Pakeeran Siriratnam, Paul Sanfilippo, Anneke van der Walt, Sifat Sharmin, Yi Chao Foong, Wei Zhen Yeh, Chao Zhu, Samia Joseph Khoury, Tunde Csepany, Barbara Willekens, et al.

(2025) JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY. 96(4). p.361-369

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Journal Article
A2
open access

Biotin/avidin-free sandwich aptamer-based lateral flow assay (ALFA) for the diagnosis of Trichomonas vaginalis

Christine Aubrey C. Justo, Vasso Skouridou, Piet Cools (UGent) , Guy Mulinganya, Alexandra Ibáñez-Escribano and Ciara K. O'Sullivan

(2025) SENSORS & DIAGNOSTICS. 4(3). p.216-228

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Journal Article
A1
open access

Biologics and airway remodeling in asthma : early, late, and potential preventive effects

G. Varricchi, R. Poto, M. Lommatzsch, Guy Brusselle (UGent) , F. Braido, J. C. Virchow and G. W. Canonica

(2025) ALLERGY. 80(2). p.408-422

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Journal Article
A1
open access

Safety and immunogenicity of an adjuvanted clostridioides difficile vaccine candidate in healthy adults : a randomized placebo-controlled phase 1 study

Isabel Leroux-Roels (UGent) , Azhar Alhatemi (UGent) , Magalie Caubet, Fien De Boever (UGent) , Bertrand de Wergifosse, Mohamed El Idrissi, Guilherme S Ferreira, Bart Jacobs (UGent) , Axel Lambert, Sandra Morel, et al.

(2025) JOURNAL OF INFECTIOUS DISEASES. 231(3). p.e511-e520

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Journal Article
A2
open access

Exploring aneuploidies in two-center isolated bovine embryonic stem cell lines : implications for cultured meat production

Chloë Deelkens (UGent) , Elly De Vlieghere (UGent) , Mario Van Poucke (UGent) , Masaki Kinoshita, Jeffrey Aalders (UGent) , Lieven Thorrez, Bert Devriendt (UGent) , Ann Van Soom (UGent) , Luc Peelman (UGent) , Björn Menten (UGent) , et al.

(2025) FUTURE FOODS. 11.

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Journal Article
A1
open access

Human stem cell models for Marfan syndrome : a brief overview of the rising star in disease modelling

Jeffrey Aalders (UGent) , Laura Muiño Mosquera (UGent) and Jolanda van Hengel (UGent)

(2025) FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY. 12.

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Journal Article
A1
open access

Impairment of endocytosis-related factors FNBP1L, ARHGAP24, and ATP6V1B1 increases HIV-1 entry into dendritic cells

Marija Janevska (UGent) , Wojciech Witkowski (UGent) , Jolien Vermeire (UGent) , Marek Borowicz, Evelien Naessens (UGent) , Hanne Vanderstraeten, Hans Nauwynck (UGent) , Herman Favoreel (UGent) and Bruno Verhasselt (UGent)

(2025) JOURNAL OF VIROLOGY.

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Journal Article
A1
open access

A novel recurrent ARL3 variant c.209G>A p.(Gly70Glu) causes variable non-syndromic dominant retinal dystrophy with defective lipidated protein transport in human retinal stem cell models

Julio C Corral-Serrano, Veronika Vaclavik, Stijn Van de Sompele (UGent) , Karolina Kaminska, Katarina Jovanovic, Pascal Escher, Filip Van Den Broeck (UGent) , Francesca Cancellieri, Vasileios Toulis, Bart Leroy (UGent) , et al.

(2025) HUMAN MOLECULAR GENETICS.

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Journal Article
A1
open access

Immunogenicity of cell death and cancer immunotherapy with immune checkpoint inhibitors

Elena Catanzaro (UGent) , Manuel Beltran-Visiedo, Lorenzo Galluzzi and Dmitri Krysko (UGent)

(2025) CELLULAR & MOLECULAR IMMUNOLOGY. 22(1). p.24-39

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Journal Article
A1
open access

Flexible methods for uncertainty estimation of digital PCR data

Yao Chen (UGent) , Ward De Spiegelaere (UGent) , Matthijs Vynck (UGent) , Wim Trypsteen (UGent) , David Gleerup (UGent) , Jo Vandesompele (UGent) and Olivier Thas (UGent)

(2025) ISCIENCE. 28(3).

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Journal Article
A1
open access

The role of N6-methyladenosine (m6A) mRNA modifications in herpesvirus infections

Ruth Verhamme (UGent) and Herman Favoreel (UGent)

(2025) JOURNAL OF VIROLOGY. 99(2).

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Miscellaneous

Hemoglobin mass determination : exploring carboxyhemoglobin stability and analyzer interchangeability

Janne Bouten (UGent) , Johan Garcia, Romain Carin, Elie Nader, Aurélien Pichon, Paul Robach, Philippe Connes and Franck Brocherie

(2025) DRUG TESTING AND ANALYSIS.

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Miscellaneous
open access

Phylogeny and ecology of the green seaweed Ulva : part II

Jonas Blomme (UGent) , Thomas Wichard and Sophie Steinhagen

(2025) BOTANICA MARINA. 68(1). p.1-3

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Journal Article
A1
open access

Reduced RG-II pectin dimerization disrupts differential growth by attenuating hormonal regulation

Pawan Kumar Jewaria, Bibek Aryal, Rifat Ara Begum, Yaowei Wang, Gloria Sancho-Andrés, Abu Imran Baba, Meng Yu, Xiaojuan Li, Jinxing Lin, Stephen C. Fry, et al.

(2025) SCIENCE ADVANCES. 11(7).

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Plasmodesmata act as unconventional membrane contact sites regulating intercellular molecular exchange in plants

Jessica Pérez-Sancho, Marija Smokvarska, Gwennogan Dubois, Marie Glavier, Sujith Sritharan, Tatiana S. Moraes, Hortense Moreau, Victor Dietrich, Matthieu P. Platre, Andrea Paterlini, et al.

(2025) CELL. 188(4). p.958-977.e23

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Journal Article
A1
open access

Modeling thoracic aortic genetic variants in the zebrafish : useful for predicting clinical pathogenicity?

Andrew Prendergast, Mary B. Sheppard, Jakub K. Famulski, Stefania Nicoli, Sandip Mukherjee, Patrick Sips (UGent) and John A. Elefteriades

(2025) FRONTIERS IN CARDIOVASCULAR MEDICINE. 12.

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Journal Article
A1
open access

Genomic analysis and replication kinetics of the closely related EHV-1 neuropathogenic 21P40 and abortigenic 97P70 strains

Eslam Mohamed (UGent) , Ines Zarak (UGent) , Nick Vereecke (UGent) , Sebastiaan Theuns (UGent) , Kathlyn Laval (UGent) and Hans Nauwynck (UGent)

(2025) VETERINARY RESEARCH. 56(1).

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PhD Thesis

Towards the engineering of the plant endoplasmic reticulum for sustainable production of specialized metabolites

Elke Clicque (UGent)

(2025)

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Journal Article
A1
open access

A human-specific, concerted repression of microcephaly genes contributes to radiation-induced growth defects in cortical organoids

Jessica Honorato Ribeiro (UGent) , Emre Etlioglu, Jasmine Buset, Ann Janssen, Hanne Puype (UGent) , Lisa Berden, Andre Claude Mbouombouo Mfossa, Winnok H. De Vos, Vanessa Vermeirssen (UGent) , Sarah Baatout (UGent) , et al.

(2025) ISCIENCE. 28(2).

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Miscellaneous
open access

DNA damage-associated vesicle production in Stenotrophomonas maltophilia is mediated by a cryptic tailocin endolysin

Darshan Chandramowli (UGent) , Jolien Vitse, Stephan Stremersch (UGent) , Koen Raemdonck (UGent) , Kevin Braeckmans (UGent) and Bart Devreese (UGent)

(2025) BIORXIV.