Ghent University Academic Bibliography

Journal Article
A1
open access

Burning questions for a warming and changing world : 15 unknowns in plant abiotic stress

Paul E Verslues, Julia Bailey-Serres, Craig Brodersen, Thomas N Buckley, Lucio Conti, Alexander Christmann, José R Dinneny, Erwin Grill, Scott Hayes, Robert W Heckman, et al.

(2023) PLANT CELL. 35(1). p.67-108

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Journal Article
A1
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BREEDIT : a multiplex genome editing strategy to improve complex quantitative traits in maize

Christian Lorenzo (UGent) , Kevin Debray (UGent) , Denia Herwegh (UGent) , Ward Develtere (UGent) , Lennert Impens (UGent) , Dries Schaumont, Wout Vandeputte (UGent) , Stijn Aesaert (UGent) , Griet Coussens (UGent) , Yara De Boe, et al.

(2023) PLANT CELL. 35(1). p.218-238

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Journal Article
open access

Improving crop yield potential: Underlying biological processes and future prospects

Alexandra J. Burgess, Céline Masclaux‐Daubresse, Günter Strittmatter, Andreas P. M. Weber, Samuel Harry Taylor, Jeremy Harbinson, Xinyou Yin, Stephen Long, Matthew J. Paul, Peter Westhoff, et al.

(2023) Food and Energy Security. 12.

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Journal Article
A1
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An in situ sequencing approach maps PLASTOCHRON1 at the boundary between indeterminate and determinate cells

Reinout Laureyns (UGent) , Jessica Joossens (UGent) , Denia Herwegh (UGent) , Julie Pevernagie (UGent) , Benjamin Pavie, Kirin Demuynck (UGent) , Kevin Debray (UGent) , Griet Coussens (UGent) , Laurens Pauwels (UGent) , Tom Van Hautegem (UGent) , et al.

(2022) PLANT PHYSIOLOGY. 188(2). p.782-794

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Journal Article
A1
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SAMBA controls cell division rate during maize development

Pan Gong (UGent) , Michiel Bontinck (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Kris Gevaert (UGent) , Dominique Eeckhout (UGent) , Geert Persiau (UGent) , Stijn Aesaert (UGent) , Griet Coussens (UGent) , Maria Van Lijsebettens (UGent) , et al.

(2022) PLANT PHYSIOLOGY. 188(1). p.411-424

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Journal Article
A2
open access

Mini-review : transgenerational CRISPR/Cas9 gene editing in plants

Lennert Impens (UGent) , Thomas B. Jacobs (UGent) , Hilde Nelissen (UGent) , Dirk Inzé (UGent) and Laurens Pauwels (UGent)

(2022) FRONTIERS IN GENOME EDITING. 4.

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Journal Article
A1
open access

Increasing yield on dry fields : molecular pathways with growing potential

Rubén Tenorio Berrio (UGent) , Hilde Nelissen (UGent) , Dirk Inzé (UGent) and Marieke Dubois (UGent)

(2022) PLANT JOURNAL. 109(2). p.323-341

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Modulation of the DA1 pathway in maize shows that translatability of information from Arabidopsis to crops is complex

Pan Gong (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Stijn Aesaert (UGent) , Griet Coussens (UGent) , Laurens Pauwels (UGent) , Dirk Inzé (UGent) and Hilde Nelissen (UGent)

(2022) PLANT SCIENCE. 321.

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Identification of growth regulators using cross-species network analysis in plants

Pasquale Luca Curci (UGent) , Jie Zhang (UGent) , Niklas Mähler, Carolin Seyfferth (UGent) , Chanaka Mannapperuma, Tim Diels (UGent) , Tom Van Hautegem (UGent) , David Jonsen, Nathaniel Street, Torgeir R Hvidsten, et al.

(2022) PLANT PHYSIOLOGY. 190(4). p.2350-2365

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The translatability of genetic networks from model to crop species : lessons from the past and perspectives for the future

Dirk Inzé (UGent) and Hilde Nelissen (UGent)

(2022) NEW PHYTOLOGIST. 236(1). p.43-48

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Journal Article
A1
open access

Modeling reveals posttranscriptional regulation of GA metabolism enzymes in response to drought and cold

Leah R. Band, Hilde Nelissen (UGent) , Simon P. Preston, Bart Rymen, Els Prinsen, Hamada AbdElgawad and Gerrit T. S. Beemster

(2022) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 119(31).

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Journal Article
A1
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Proximal hyperspectral imaging detects diurnal and drought-induced changes in maize physiology

Stien Mertens (UGent) , Lennart Verbraeken (UGent) , Heike Sprenger (UGent) , Kirin Demuynck (UGent) , Katrien Maleux (UGent) , Bernard Cannoot (UGent) , Jolien De Block (UGent) , Steven Maere (UGent) , Hilde Nelissen (UGent) , Gustavo Bonaventure, et al.

(2021) FRONTIERS IN PLANT SCIENCE. 12.

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Journal Article
A2
open access

An RNA in situ hybridization protocol optimized for monocot tissue

Nora R. Zöllner, Margaret Bezrutczyk, Reinout Laureyns (UGent) , Hilde Nelissen (UGent) , Rüdiger Simon and Wolf B. Frommer

(2021) STAR PROTOCOLS. 2(2).

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Journal Article
A1
open access

Drought affects the rate and duration of organ growth but not inter-organ growth coordination

Lennart Verbraeken (UGent) , Nathalie Wuyts (UGent) , Stien Mertens (UGent) , Bernard Cannoot (UGent) , Katrien Maleux (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Julie Merchie (UGent) , Stijn Dhondt (UGent) , Gustavo Bonaventure, et al.

(2021) PLANT PHYSIOLOGY. 186(2). p.1336-1353

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Journal Article
A1
open access

A forward genetics approach integrating genome-wide association study and expression quantitative trait locus mapping to dissect leaf development in maize (Zea mays)

Mara Miculan, Hilde Nelissen (UGent) , Manel Ben Hassen (UGent) , Fabio Marroni, Dirk Inzé (UGent) , Mario Enrico Pè and Matteo Dell’Acqua

(2021) PLANT JOURNAL. 107(4). p.1056-1071

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The dynamics of maize leaf development : patterned to grow while growing a pattern

Josh Strable and Hilde Nelissen (UGent)

(2021) CURRENT OPINION IN PLANT BIOLOGY. 63.

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Journal Article
A1
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Turgor-time controls grass leaf elongation rate and duration under drought stress

Jonas Coussement (UGent) , Selwyn Villers (UGent) , Hilde Nelissen (UGent) , Dirk Inzé (UGent) and Kathy Steppe (UGent)

(2021) PLANT CELL AND ENVIRONMENT. 44(5). p.1361-1378

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Journal Article
A1
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Root engineering in maize by increasing cytokinin degradation causes enhanced root growth and leaf mineral enrichment

Eswarayya Ramireddy, Hilde Nelissen (UGent) , Jan Erik Leuendorf, Maria Van Lijsebettens (UGent) , Dirk Inzé (UGent) and Thomas Schmuelling

(2021) PLANT MOLECULAR BIOLOGY. 106(6). p.555-567

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Journal Article
A1
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From lab to field : yield stability and shade avoidance genes are massively differentially expressed in the field

Hilde Nelissen (UGent) , Heike Sprenger (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Tom Van Hautegem (UGent) , Alex De Vliegher and Dirk Inzé (UGent)

(2020) PLANT BIOTECHNOLOGY JOURNAL. 18(5). p.1112-1114

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Journal Article
A1
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Comparative transcriptomics enables the identification of functional orthologous genes involved in early leaf growth

Jasmien Vercruysse, Michiel Van Bel (UGent) , Cristina Osuna, Shubhada Rajabhau Kulkarni, Véronique Van den Storme, Hilde Nelissen (UGent) , Nathalie Gonzalez Sanchez (UGent) , Dirk Inzé (UGent) and Klaas Vandepoele (UGent)

(2020) PLANT BIOTECHNOLOGY JOURNAL. 18(2). p.553-567

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Journal Article
A1
open access

Using single‐plant‐omics in the field to link maize genes to functions and phenotypes

Daniel Felipe Cruz Galvis (UGent) , Sam De Meyer (UGent) , Joke Ampe, Heike Sprenger (UGent) , Dorota Herman (UGent) , Tom Van Hautegem (UGent) , Jolien De Block (UGent) , Dirk Inzé (UGent) , Hilde Nelissen (UGent) and Steven Maere (UGent)

(2020) MOLECULAR SYSTEMS BIOLOGY. 16(12).

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Journal Article
A1
open access

Modification of the expression of the aquaporin ZmPIP2;5 affects water relations and plant growth

Lei Ding, Thomas Milhiet, Valentin Couvreur, Hilde Nelissen (UGent) , Adel Meziane, Boris Parent, Stijn Aesaert (UGent) , Maria Van Lijsebettens (UGent) , Dirk Inzé (UGent) , Francois Tardieu, et al.

(2020) PLANT PHYSIOLOGY. 182(4). p.2154-2165

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Journal Article
A1
open access

How grass keeps growing : an integrated analysis of hormonal crosstalk in the maize leaf growth zone

Dirk De Vos, Hilde Nelissen (UGent) , Hamada AbdElgawad, Els Prinsen, Jan Broeckhove, Dirk Inzé (UGent) and Gerrit TS Beemster

(2020) NEW PHYTOLOGIST. 225(6). p.2513-2525

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Miscellaneous
open access

Understanding plant organ growth : a multidisciplinary field

Hilde Nelissen (UGent) and Nathalie Gonzalez Sanchez (UGent)

(2020) JOURNAL OF EXPERIMENTAL BOTANY. 71(1). p.7-10

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Journal Article
A1
open access

Tapping into the maize root microbiome to identify bacteria that promote growth under chilling conditions

Stien Beirinckx, Tom Viaene (UGent) , Annelies Haegeman, Jane Debode, Fien Amery, Steven Vandenabeele, Hilde Nelissen (UGent) , Dirk Inzé (UGent) , Raul Tito, Jeroen Raes, et al.

(2020) MICROBIOME. 8(1).

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Journal Article
A1
open access

Source-sink regulation in crops under water deficit

Joana Rita António Rodrigues (UGent) , Dirk Inzé (UGent) , Hilde Nelissen (UGent) and Nelson JM Saibo

(2019) TRENDS IN PLANT SCIENCE. 24(7). p.652-663

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Functional analysis of Arabidopsis and maize transgenic lines overexpressing the ADP-ribose/NADH pyrophosphohydrolase, AtNUDX7

Elizabeth Njuguna (UGent) , Griet Coussens (UGent) , Pia Neyt (UGent) , Stijn Aesaert (UGent) , Veronique Storme (UGent) , Kirin Demuynck (UGent) , Hannes Vanhaeren (UGent) , Stijn Dhondt (UGent) , Yolaine Van Haver, Linus Paul, et al.

(2019) INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY. 63(1-2). p.45-55

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Journal Article
A1
open access

Unravelling the genetic basis of Fusarium seedling rot resistance in the MAGIC maize population : novel targets for breeding

Popi Septiani, Alessandra Lanubile, Lorenzo Stagnati, Matteo Busconi, Hilde Nelissen (UGent) , Mario Enrico Pè, Matteo Dell’Acqua and Adriano Marocco

(2019) SCIENTIFIC REPORTS. 9(1).

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Journal Article
A1
open access

Growth rate rather than growth duration drives growth heterosis in maize B104 hybrids

Kim Feys (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Anchal Bisht (UGent) , Alex De Vliegher, Dirk Inzé (UGent) and Hilde Nelissen (UGent)

(2018) PLANT CELL AND ENVIRONMENT. 41(2). p.374-382

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Journal Article
A1
open access

The reduction in maize leaf growth under mild drought affects the transition between cell division and cell expansion and cannot be restored by elevated gibberellic acid levels

Hilde Nelissen (UGent) , Xiaohuan Sun (UGent) , Bart Rymen (UGent) , Yusuke Jikumaru, Mikko Kojima, Yumiko Takebayashi, Rafael Abbeloos (UGent) , Kirin Demuynck (UGent) , Veronique Storme (UGent) , Marnik Vuylsteke (UGent) , et al.

(2018) PLANT BIOTECHNOLOGY JOURNAL. 16(2). p.615-627

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Journal Article
A1
open access

GSyellow, a multifaceted tag for functional protein analysis in monocot and dicot plants

Nienke Besbrugge, Jelle Van Leene (UGent) , Dominique Eeckhout (UGent) , Bernard Cannoot (UGent) , Shubhada Rajabhau Kulkarni, Nancy De Winne (UGent) , Geert Persiau (UGent) , Eveline Van De Slijke (UGent) , Michiel Bontinck (UGent) , Stijn Aesaert (UGent) , et al.

(2018) PLANT PHYSIOLOGY. 177(2). p.447-464

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Journal Article
A1
open access

Recent trends in plant protein complex analysis in a developmental context

Michiel Bontinck (UGent) , Jelle Van Leene (UGent) , Astrid Gadeyne (UGent) , Bert De Rybel (UGent) , Dominique Eeckhout (UGent) , Hilde Nelissen (UGent) and Geert De Jaeger (UGent)

(2018) FRONTIERS IN PLANT SCIENCE. 9.

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Journal Article
A1
open access

Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration

Xiaohuan Sun (UGent) , James Cahill, Tom Van Hautegem (UGent) , Kim Feys (UGent) , Clinton Whipple (UGent) , Ondrej Novak, Sofie Delbare, Charlot Versteele (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , et al.

(2017) NATURE COMMUNICATIONS. 8.

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Journal Article
A1
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Combined large-scale phenotyping and transcriptomics in maize reveals a robust growth regulatory network

Joke Baute (UGent) , Dorota Herman (UGent) , Frederik Coppens (UGent) , Jolien De Block (UGent) , Bram Slabbinck (UGent) , Matteo Dell'Acqua, Mario Enrico Pe, Steven Maere (UGent) , Hilde Nelissen (UGent) and Dirk Inzé (UGent)

(2016) PLANT PHYSIOLOGY. 170(3). p.1848-1867

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Journal Article
A1
open access

Leaf growth in dicots and monocots : so different yet so alike

Hilde Nelissen (UGent) , Nathalie Gonzalez Sanchez (UGent) and Dirk Inzé (UGent)

(2016) CURRENT OPINION IN PLANT BIOLOGY. 33. p.72-76

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Book Chapter

How plant hormones and their interactions affect cell growth

Stephen Depuydt (UGent) , Stan Van Praet, Hilde Nelissen (UGent) , Bartel Vanholme (UGent) and Danny Vereecke (UGent)

(2016) Molecular cell biology of the growth and differentiation of plant cells. p.174-195

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Journal Article
A1
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Overexpression of GA20-OXIDASE1 impacts plant height, biomass allocation and saccharification efficiency in maize

Wannes Voorend (UGent) , Hilde Nelissen (UGent) , Ruben Vanholme (UGent) , Alex De Vliegher, Frank Van Breusegem (UGent) , Wout Boerjan (UGent) , Isabel Roldán-Ruiz (UGent) , Hilde Muylle and Dirk Inzé (UGent)

(2016) PLANT BIOTECHNOLOGY JOURNAL. 14(3). p.997-1007

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Journal Article
A1
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Up-to-date workflow for plant (phospho)proteomics identifies differential drought-responsive phosphorylation events in maize leaves

Lam Dai Vu (UGent) , Elisabeth Stes (UGent) , Michiel Van Bel (UGent) , Hilde Nelissen (UGent) , Davy Maddelein (UGent) , Dirk Inzé (UGent) , Frederik Coppens (UGent) , Lennart Martens (UGent) , Kris Gevaert (UGent) and Ive De Smet (UGent)

(2016) JOURNAL OF PROTEOME RESEARCH. 15(12). p.4304-4317

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Journal Article
A1
open access

RNA interference knockdown of BRASSINOSTEROID INSENSITIVE1 in maize reveals novel functions for brassinosteroid signaling in controlling plant architecture

Gokhan Kir, Huaxun Ye, Hilde Nelissen (UGent) , Anjanasree K Neelakandan, Andree S Kusnandar, Anding Luo, Dirk Inzé (UGent) , Anne W Sylvester, Yanhai Yin and Philip W Becraft

(2015) PLANT PHYSIOLOGY. 169(1). p.826-839

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Journal Article
A1
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Correlation analysis of the transcriptome of growing leaves with mature leaf parameters in a maize RIL population

Joke Baute (UGent) , Dorota Herman (UGent) , Frederik Coppens (UGent) , Jolien De Block (UGent) , Bram Slabbinck (UGent) , Matteo Dell'Acqua, Mario Enrico Pè, Steven Maere (UGent) , Hilde Nelissen (UGent) and Dirk Inzé (UGent)

(2015) GENOME BIOLOGY. 16.

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Journal Article
A1
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Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays

Matteo Dell'Acqua, Daniel M Gatti, Giorgio Pea, Federica Cattonaro, Frederik Coppens (UGent) , Gabriele Magris, Aye L Hlaing, Htay H Aung, Hilde Nelissen (UGent) , Joke Baute (UGent) , et al.

(2015) GENOME BIOLOGY. 16.

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Journal Article
A1
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Dynamic changes in ANGUSTIFOLIA3 complex composition reveal a growth regulatory mechanism in the maize leaf

Hilde Nelissen (UGent) , Dominique Eeckhout (UGent) , Kirin Demuynck (UGent) , Geert Persiau (UGent) , Alan Walton (UGent) , Michiel Van Bel (UGent) , Marieke Vervoort, Jasper Candaele (UGent) , Jolien De Block (UGent) , Stijn Aesaert (UGent) , et al.

(2015) PLANT CELL. 27(6). p.1605-1619

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Journal Article
A1
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LEAF-E: a tool to analyze grass leaf growth using function fitting

Wannes Voorend (UGent) , Peter Lootens, Hilde Nelissen (UGent) , Isabel Roldán-Ruiz (UGent) , Dirk Inzé (UGent) and Hilde Muylle

(2014) PLANT METHODS. 10.

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Differential methylation during maize leaf growth targets developmentally regulated genes

Jasper Candaele (UGent) , Kirin Demuynck (UGent) , Douglas Mosoti, Gerrit T. S. Beemster, Dirk Inzé (UGent) and Hilde Nelissen (UGent)

(2014) PLANT PHYSIOLOGY. 164(3). p.1350-1364

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Translational research: from pot to plot

Hilde Nelissen (UGent) , Maurice Moloney and Dirk Inzé (UGent)

(2014) PLANT BIOTECHNOLOGY JOURNAL. 12(3). p.277-285

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Book Chapter

Kinematic analysis of cell division in leaves of mono- and dicotyledonous species: a basis for understanding growth and developing refined molecular sampling strategies

Hilde Nelissen (UGent) , Bart Rymen (UGent) , Frederik Coppens (UGent) , Stijn Dhondt (UGent) , Fabio Fiorani (UGent) and Gerrit Beemster (UGent)

(2013) Plant organogenesis : methods and protocols. In Methods in Molecular Biology 959. p.247-264

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CORNET 2.0: integrating plant coexpression, protein-protein interactions, regulatory interactions, gene associations and functional annotations

Stefanie De Bodt (UGent) , Jens Hollunder (UGent) , Hilde Nelissen (UGent) , Nick Meulemeester and Dirk Inzé (UGent)

(2012) NEW PHYTOLOGIST. 195(3). p.707-720

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A local maximum in gibberellin levels regulates maize leaf growth by spatial control of cell division

Hilde Nelissen (UGent) , Bart Rymen (UGent) , Yusuke Jikumaru, Kirin Demuynck (UGent) , Maria Van Lijsebettens (UGent) , Yuji Kamiya, Dirk Inzé (UGent) and Gerrit Beemster (UGent)

(2012) CURRENT BIOLOGY. 22(13). p.1183-1187

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Histone H2B monoubiquitination is required to reach maximal transcript levels of circadian clock genes in Arabidopsis

Kristiina Himanen (UGent) , Magdalena Woloszynska (UGent) , Tommaso M Boccardi, Steven De Groeve (UGent) , Hilde Nelissen (UGent) , Leonardo Bruno, Marnik Vuylsteke (UGent) and Maria Van Lijsebettens (UGent)

(2012) PLANT JOURNAL. 72(2). p.249-260

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Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation

Hilde Nelissen (UGent) , Steven De Groeve (UGent) , Delphine Fleury, Pia Neyt (UGent) , Leonardo Bruno, Maria Beatrice Bitonti, Filip Vandenbussche (UGent) , Dominique Van Der Straeten (UGent) , Takahiro Yamaguchi, Hirokazu Tsukaya, et al.

(2010) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 107(4). p.1678-1683