Show
Sort by
-
- Journal Article
- A1
- open access
ELLIPSIS : robust quantification of splicing in scRNA-seq
-
- Conference Paper
- C1
- open access
Prior knowledge injection into deep learning models predicting gene expression from whole slide images
-
- Journal Article
- A1
- open access
EPS inhibitor treatment of Salmonella impacts evolution without selecting for resistance to biofilm inhibition
-
- Journal Article
- A1
- open access
Assessing the authenticity and purity of a commercial Bacillus thuringiensis bioinsecticide through whole genome sequencing and metagenomics approaches
-
- Journal Article
- A1
- open access
Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling
-
Synthetic multimodal data modelling for data imputation
-
- Journal Article
- A1
- open access
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities
-
- Journal Article
- A1
- open access
Digital profiling of gene expression from histology images with linearized attention
-
- Journal Article
- A1
- open access
Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices
-
- Journal Article
- A1
- open access
Expression divergence of expansin genes drive the heteroblasty in Ceratopteris chingii
-
- Journal Article
- A1
- open access
Competitive interactions facilitate resistance development against antimicrobials
-
- Journal Article
- A1
- open access
Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance
-
- Miscellaneous
- open access
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing (vol 52, pg 331, 2020)
-
- Journal Article
- A1
- open access
Whole slide imaging-based prediction of TP53 mutations identifies an aggressive disease phenotype in prostate cancer
-
- Journal Article
- A1
- open access
Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium
-
WSI based prediction of TP53 mutations identifies aggressive disease phenotype in prostate cancer
-
- Journal Article
- A1
- open access
Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data
-
- Journal Article
- A1
- open access
Antibiotic cycling affects resistance evolution independently of collateral sensitivity
-
- Journal Article
- A2
- open access
Extracting functional insights from loss-of-function screens using deep link prediction
-
- Journal Article
- A1
- open access
Metagenomics to detect and characterize viruses in food samples at genome level? Lessons learnt from a norovirus study
-
- Journal Article
- A1
- open access
Evolution of isoform‐level gene expression patterns across tissues during lotus species divergence
-
Comparative transcriptome analysis of two maize genotypes with different tolerance to salt stress
-
OMEN : network-based driver gene identification using mutual exclusivity
-
- Miscellaneous
- open access
Benchmark of tools for in silico prediction of MHC class I and class II genotypes from NGS data
(2022) -
- Journal Article
- A1
- open access
Halvade somatic : somatic variant calling with Apache Spark
-
- Journal Article
- A1
- open access
BLSSpeller to discover novel regulatory motifs in maize
-
- Journal Article
- A1
- open access
Low immunogenicity of common cancer hot spot mutations resulting in false immunogenic selection signals
-
- Journal Article
- A1
- open access
First detection of a plasmid-encoded New-Delhi metallo-beta-lactamase-1 (NDM-1) producing Acinetobacter baumannii using whole genome sequencing, isolated in a clinical setting in Benin
-
- Journal Article
- A1
- open access
Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods
-
- Journal Article
- A1
- open access
A bioinformatics whole-genome sequencing workflow for clinical Mycobacterium tuberculosis complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and in silico approaches
-
- Journal Article
- A1
- open access
Genome-wide expression and network analyses of mutants in key brassinosteroid signaling genes
-
DNA-SIP and repeated isolation corroborate Variovorax as a key organism in maintaining the genetic memory for linuron biodegradation in an agricultural soil
-
- Journal Article
- A1
- open access
Dynamic partitioning of search patterns for approximate pattern matching using search schemes
-
- Journal Article
- A1
- open access
Application of a strain- level shotgun metagenomics approach on food samples : resolution of the source of a Salmonella food-borne outbreak
-
- Journal Article
- A1
- open access
Network-based analysis to identify drivers of metastatic prostate cancer using GoNetic
-
- Journal Article
- A1
- open access
Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford nanopore sequencing technologies
-
Whole genome sequencing provides an added value to the investigation of staphylococcal food poisoning outbreaks
-
- Conference Paper
- C3
- open access
Multifocality in prostate cancer : implications for PAM50 subtyping using an index lesion-only approach
-
- Journal Article
- A1
- open access
Evaluation of WGS performance for bacterial pathogen characterization with the Illumina technology optimized for time-critical situations
-
- Journal Article
- A1
- open access
Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation
-
- Journal Article
- A2
- open access
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
-
- Journal Article
- A1
- open access
Whole-genome sequencing-based antimicrobial resistance characterization and phylogenomic investigation of 19 multidrug-resistant and extended-spectrum beta-lactamase-positive escherichia coli strains collected from hospital patients in Benin in 2019
-
- Journal Article
- A1
- open access
Distinct expression and methylation patterns for genes with different fates following a single whole-genome duplication in flowering plants
-
- Journal Article
- A1
- open access
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
-
- Journal Article
- A1
- open access
Image-based dynamic phenotyping reveals genetic determinants of filamentation-mediated beta-lactam tolerance
-
A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay
-
- Journal Article
- A1
- open access
Pathway and network analysis of more than 2500 whole cancer genomes
-
- Journal Article
- A1
- open access
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
-
- Journal Article
- A1
- open access
Integrative pathway enrichment analysis of multivariate omics data
-
- Journal Article
- A1
- open access
Combined burden and functional impact tests for cancer driver discovery using DriverPower