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- Journal Article
- A1
- open access
MYCN and SNRPD3 cooperate to maintain a balance of alternative splicing events that drives neuroblastoma progression
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- Journal Article
- A1
- open access
Human iPSC modeling recapitulates in vivo sympathoadrenal development and reveals an aberrant developmental subpopulation in familial neuroblastoma
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- Journal Article
- A1
- open access
Evaluation of single-sample network inference methods for precision oncology
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- Journal Article
- A1
- open access
SOX11 regulates SWI/SNF complex components as member of the adrenergic neuroblastoma core regulatory circuitry
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- Journal Article
- A1
- open access
Memory of stochastic single-cell apoptotic signaling promotes chemoresistance in neuroblastoma
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- Journal Article
- A1
- open access
Circulating immune cell dynamics as outcome predictors for immunotherapy in non-small cell lung cancer
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- Journal Article
- A1
- open access
Cell-free DNA as a diagnostic and prognostic biomarker in pediatric rhabdomyosarcoma
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Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Conference Paper
- C3
- open access
Dramatic impact of blood collection tube and RNA purification method on extracellular RNA transcriptomes
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- Journal Article
- A1
- open access
Mitotic dysregulation at tumor initiation creates a therapeutic vulnerability to combination anti-mitotic and pro-apoptotic agents for MYCN-driven neuroblastoma
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- Journal Article
- A1
- open access
Comprehensive RNA dataset of tissue and plasma from patients with esophageal cancer or precursor lesions
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Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
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- Journal Article
- A1
- open access
The feasibility of using liquid biopsies as a complementary assay for copy number aberration profiling in routinely collected paediatric cancer patient samples
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Towards the discovery of prognostic and predictive biomarkers in CHEERS, a radioimmunotherapy phase II trial
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Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
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- Journal Article
- A2
- open access
Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells
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- Miscellaneous
- open access
When DNA gets in the way in RNA-seq experiments, a sequel
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- Journal Article
- A1
- open access
RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition
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- Journal Article
- A1
- open access
Digital PCR-based evaluation of nucleic acid extraction kit performance for the co-purification of cell-free DNA and RNA
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The Extracellular RNA Quality Control (exRNAQC) study (phase 1)
(2022) -
The Extracellular RNA Quality Control (exRNAQC) study (phase 2)
(2022) -
- Miscellaneous
- open access
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
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- Journal Article
- A1
- open access
Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome
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- Journal Article
- A1
- open access
Frequency and prognostic impact of ALK amplifications and mutations in the European Neuroblastoma Study Group (SIOPEN) high-risk neuroblastoma trial (HR-NBL1)
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- Journal Article
- A1
- open access
Evaluation of a marker independent isolation method for circulating tumor cells in esophageal adenocarcinoma
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The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)
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The RNA Atlas expands the catalog of human non-coding RNAs
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SOX11 as guardian of epigenetic plasticity in neuroblastoma
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- Journal Article
- A1
- open access
MEIS2 is an adrenergic core regulatory transcription factor involved in early initiation of TH-MYCN-driven neuroblastoma formation
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- Journal Article
- A1
- open access
From DNA copy number gains and tumor dependencies to novel therapeutic targets for high-risk neuroblastoma
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Recurrent chromosomal imbalances provide selective advantage to human embryonic stem cells under enhanced replicative stress conditions
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The functional annotation and exploration the SOX11 enhanceosome
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Long noncoding RNA SILC1 is an upstream regulator of SOX11 in neuroblastoma
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Inferring the genomic landscape of lymph-node positive high-risk prostate cancer
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Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA
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Distinct Notch1 and BCL11B requirements mediate human γδ/αβ T cell development
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When DNA gets in the way : a cautionary note for DNA contamination in extracellular RNA-seq studies
(2020) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 117(32). p.18934-18936 -
- Journal Article
- A1
- open access
Benchmarking of cell type deconvolution pipelines for transcriptomics data
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SOX11 as guardian of epigenetic plasticity in neuroblastoma
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- Journal Article
- A1
- open access
The pitfalls and promise of liquid biopsies for diagnosing and treating solid tumors in children : a review
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- Journal Article
- A1
- open access
The ETS transcription factor ETV5 is a target of activated ALK in neuroblastoma contributing to increased tumour aggressiveness
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DREAM target reactivation by core transcriptional regulators supports neuroblastoma growth
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Faster, cheaper and more accurate diagnosis of cancer of unknown primary (CUP) by using methylation profiling.
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Genetic alterations of ALK in high-risk neuroblastoma patients : a SIOPEN study
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Non-invasive classification of pediatric tumor types using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
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Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
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SOX11 is a key epigenetic regulator in the adrenergic MYCN amplified neuroblastoma
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SOX11 as mediator of the adrenergic cell state in NB