Ghent University Academic Bibliography

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Indole decreases the virulence of pathogenic vibrios belonging to the Harveyi clade

Shanshan Zhang (UGent) , Qian Yang (UGent) and Tom Defoirdt (UGent)

(2022) JOURNAL OF APPLIED MICROBIOLOGY. 132(1). p.167-176
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Distinct dynamics of Vibrio parahaemolyticus populations in two farming models

Qian Yang (UGent) , Qingyao Wang, Junmin Wu, Yixiang Zhang, Dawei Wei, Baocheng Qu, Ying Liu and Songzhe Fu

(2022) JOURNAL OF APPLIED MICROBIOLOGY.
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Phosphorus puts a mortgage on restoration of species-rich grasslands on former agricultural land

E. P. Goossens, An De Schrijver (UGent) , Stephanie Schelfhout (UGent) , Margot Vanhellemont (UGent) , Kris Verheyen (UGent) and Jan Mertens (UGent)

(2022) RESTORATION ECOLOGY.
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Binding of Orysata lectin induces an immune response in insect cells

Pengyu Chen (UGent) , Kristof De Schutter (UGent) , Jarne Pauwels (UGent) , Kris Gevaert (UGent) , Els Van Damme (UGent) and Guy Smagghe (UGent)

(2022) INSECT SCIENCE.
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Influence of bioprocess parameters on sophorolipid production from bakery waste oil

Ming Ho To, Huaimin Wang, Tsz Nok Lam, Guneet Kaur, Sophie Roelants (UGent) and Carol Sze Ki Lin

(2022) CHEMICAL ENGINEERING JOURNAL. 429.
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- Book Chapter
Means to quantify vascular cell file numbers in different tissues

Helena Arents (UGent) , Gugan Eswaran, Matous Glanc (UGent) , Ari Pekka Mähönen and Bert De Rybel (UGent)

(2022) Plant cell division : methods and protocols. In Methods in Molecular Biology 2382. p.155-179
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From bumblebee to bioeconomy : recent developments and perspectives for sophorolipid biosynthesis

Sven Dierickx (UGent) , Martijn Georges Castelein (UGent) , Jelle Remmery, Veerle De Clercq (UGent) , Sofie Lodens, Niki Baccile, Sofie De Maeseneire (UGent) , Sophie Roelants (UGent) and Wim Soetaert (UGent)

(2022) BIOTECHNOLOGY ADVANCES. 54.
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Radiation-induced cardiovascular disease : an overlooked role for DNA methylation?

Magy Sallam, Mohammed Abderrafi Benotmane, Sarah Baatout (UGent) , Pieter-Jan Guns and An Aerts

(2022) EPIGENETICS. 17(1). p.59-80
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Muscle fibre typology as a novel risk factor for hamstring strain injuries in professional football (soccer) : a prospective cohort study

Eline Lievens (UGent) , Kim Van Vossel (UGent) , Freek Van de Casteele (UGent) , Evi Wezenbeek (UGent) , Dieter Deprez (UGent) , Stijn Matthys (UGent) , Bram De Winne, Steve McNally, Wolter De Graaf, James Burdoch, et al.

(2022) SPORTS MEDICINE. 52(1). p.177-185
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Prospective BMI changes in preschool children are associated with parental characteristics and body weight perceptions : the ToyBox-study

Yannis Manios, Katrina A Lambert, Eva Karaglani, Christina Mavrogianni, Luis A Moreno Aznar, Violeta Iotova, Anna Świąder-Leśniak, Berthold Koletzko, Greet Cardon (UGent) , Odysseas Androutsos, et al.

(2022) PUBLIC HEALTH NUTRITION.
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Triplex digital PCR assays for the quantification of intact proviral HIV-1 DNA

Willem van Snippenberg (UGent) , David Gleerup (UGent) , Sofie Rutsaert (UGent) , Linos Vandekerckhove (UGent) , Ward De Spiegelaere (UGent) and Wim Trypsteen (UGent)

(2022) METHODS. 201. p.41-48
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Undifferentiated sarcoma of bone with a round to epithelioid cell phenotype harboring a novel EWSR1-SSX2 fusion identified by RNA-based next-generation sequencing

Fleur Cordier (UGent) , Joni Van der Meulen (UGent) , Bram Van Gaever (UGent) , Lore Lapeire (UGent) , Gwen Sys (UGent) , Jo Van Dorpe (UGent) and David Creytens (UGent)

(2022) GENES CHROMOSOMES & CANCER. 61(1). p.44-49
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Ksrates : positioning whole-genome duplications relative to speciation events in KS distributions

Cecilia Sensalari (UGent) , Steven Maere (UGent) and Rolf Lohaus (UGent)

(2022) BIOINFORMATICS. 38(2). p.530-532
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Improving oxidative stress resilience in plants

Pavel Kerchev and Frank Van Breusegem (UGent)

(2022) PLANT JOURNAL. 109(2). p.359-372
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A calmodulin antagonist protects in vitro raspberries against disturbed photosynthesis caused by constant light and cytokinin

Nino Murvanidze (UGent) , Maarten Ameye (UGent) , Danny Geelen (UGent) and Stefaan Werbrouck (UGent)

(2022) PLANT CELL TISSUE AND ORGAN CULTURE. 148(1). p.73-80
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What can biofabrication do for space and what can space do for biofabrication?

Lorenzo Moroni, Kevin Tabury, Hilde Stenuit, Daniela Grimm, Sarah Baatout (UGent) and Vladimir Mironov

(2022) TRENDS IN BIOTECHNOLOGY.
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Simulating tree growth response to climate change in structurally-diverse oak and beech forests

Louis de Wergifosse, Frédéric Andre, Hugues Goosse, Andrzej Boczon, Sébastien Cecchini, Albert Ciceu, Alessio Collalti, Nathalie Cools, Ettore D'Andrea, Bruno de Vos, et al.

(2022) SCIENCE OF THE TOTAL ENVIRONMENT. 806(2).
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Molecular mechanisms of endomembrane trafficking in plants

Fernando Aniento, Víctor Sánchez de Medina Hernández, Yasin Dagdas, Marcela Rojas-Pierce and Eugenia Russinova (UGent)

(2022) PLANT CELL. 34(1). p.146-173
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Advancing root developmental research through single-cell technologies

Max Minne (UGent) , Yuji Ke (UGent) , Maite Saura Sanchez (UGent) and Bert De Rybel (UGent)

(2022) CURRENT OPINION IN PLANT BIOLOGY. 65.
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Tubular bioartificial organs : from physiological requirements to fabrication processes and resulting properties : a critical review

Nele Pien (UGent) , Sara Palladino, Francesco Copes, Gabriele Candiani, Peter Dubruel (UGent) , Sandra Van Vlierberghe (UGent) and Diego Mantovani

(2022) CELLS TISSUES ORGANS. 211(4). p.128-154
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Selective copper recovery from ammoniacal waste streams using a systematic biosorption process

Nina Ricci Nicomel (UGent) , Lila Otero Gonzalez (UGent) , Adam Williamson (UGent) , Yong Sik Ok, Pascal Van Der Voort (UGent) , Tom Hennebel (UGent) and Gijs Du Laing (UGent)

(2022) CHEMOSPHERE. 286(3).
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RNAi of the N-glycosylation-related genes confirms their importance in insect development and alpha-1,6-fucosyltransferase plays a role in the ecdysis event for the hemimetabolous pest insect Nilaparvata lugens

Qun Yang (UGent) , Kristof De Schutter (UGent) , Pengyu Chen (UGent) , Els Van Damme (UGent) and Guy Smagghe (UGent)

(2022) INSECT SCIENCE. 29(1). p.91-99
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GNBP1 as a potential RNAi target to enhance the virulence of Beauveria bassiana for aphid control

Chao Ye, Zheng-Wu Wang, Yuan-Lan Sheng, Zi-Guo Wang, Guy Smagghe (UGent) , Olivier Christiaens (UGent) , Jinzhi Niu and Jin-Jun Wang

(2022) JOURNAL OF PEST SCIENCE. 95(1). p.87-100
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Novel antibody cocktail targeting Bet v 1 rapidly and sustainably treats birch allergy symptoms in a Phase 1 study

Philippe Gevaert (UGent) , Jarno De Craemer (UGent) , Natalie De Ruyck (UGent) , Sylvie Rottey (UGent) , Jan de Hoon, Peter W. Hellings, Bram Volckaert, Kristof Lesneuck, Jamie M. Orengo, Amanda Atanasio, et al.

(2022) JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 149(1). p.189-199
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Epithelial-mesenchymal transition (EMT) as a therapeutic target

Sven Jonckheere (UGent) , Jamie Adams, Dominic De Groote (UGent) , Kyra Campbell, Geert Berx (UGent) and Steven Goossens (UGent)

(2022) CELLS TISSUES ORGANS. 211(2). p.157-182
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Comment on : 'Penetration of antibacterial agents into pulmonary epithelial lining fluid : an update'

Pieter-Jan De Sutter (UGent) , Jan De Waele (UGent) and An Vermeulen (UGent)

(2022) CLINICAL PHARMACOKINETICS. 61. p.335-336
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Production of solid hydrochar from waste seaweed by hydrothermal carbonization : effect of process variables

Sepideh Soroush (UGent) , Frederik Ronsse (UGent) , An Verberckmoes (UGent) , Francis Verpoort (UGent) , Jihae Park, Di Wu (UGent) and Philippe Heynderickx (UGent)

(2022) BIOMASS CONVERSION AND BIOREFINERY.
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Increasing wild bee richness and abundance on sequentially flowering cultivars of a pollinator-dependent crop

Maxime Eeraerts

(2022) AGRICULTURE ECOSYSTEMS & ENVIRONMENT. 325.
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Discovery of a widespread presence bunyavirus that may have symbiont-like relationships with different species of aphids

Xin An, Wei Zhang, Chao Ye, Guy Smagghe (UGent) , Jin-Jun Wang and Jinzhi Niu

(2022) INSECT SCIENCE.
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- Miscellaneous
- open access
Editorial : plant-pest interactions volume I : Acari and thrips

George Broufas, Felix Ortego, Takeshi Suzuki, Guy Smagghe (UGent) , Colette Broekgaarden and Isabel Diaz

(2022) FRONTIERS IN PLANT SCIENCE. 12.
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Oviposition preference and two-sex life table of Plutella xylostella and its association with defensive enzymes in three Brassicaceae crops

Muhammad Afaq Ahmed, He-He Cao, Waqar Jaleel, Muhammad Bilal Amir, Muhammad Yasir Ali, Guy Smagghe (UGent) and Tong-Xian Liu

(2022) CROP PROTECTION. 151.
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Translocation of tebuconazole between bee matrices and its potential threat on honey bee (Apis mellifera Linnaeus) queens

Risto Raimets, Sigmar Naudi, Marika Mand, Vadims Bartkevics, Guy Smagghe (UGent) and Reet Karise

(2022) INSECTS. 13(1).
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Dominance of honey bees is negatively associated with wild bee diversity in commercial apple orchards regardless of management practices

Timothy Weekers, Leon Marshall, Nicolas Leclercq, Thomas James Wood, Diego Cejas, Bianca Drepper, Louise Hutchinson, Denis Michez, Jean-Marc Molenberg, Guy Smagghe (UGent) , et al.

(2022) AGRICULTURE ECOSYSTEMS & ENVIRONMENT. 323.
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Increased compositional heterogeneity of mass-flowering orchard crops does not promote wild bee abundance in orchards

Matti Pisman (UGent) , Maxime Eeraerts, Daniel Alejandro Ariza Pacheco (UGent) , Guy Smagghe (UGent) and Ivan Meeus (UGent)

(2022) AGRICULTURAL AND FOREST ENTOMOLOGY. 24(1). p.8-17
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- PhD Thesis
The cross-bacterial expression system : development of parts and tools for standardized gene engineering across the bacterial domain

Lien De Wannemaeker (UGent)

(2022)
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Systemic mastocytosis with myeloid sarcoma and B-CLL : molecular and clonal heterogeneity in a rare case of SM-AHN with review of literature

Philippe Decruyenaere (UGent) , Dominiek Mazure (UGent) , Ine Moors (UGent) , Jo Van Dorpe (UGent) , Malaïka Van der Linden (UGent) , Barbara Denys (UGent) , Mattias Hofmans (UGent) and Fritz Offner (UGent)

(2022) ACTA CLINICA BELGICA.
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Cold case : the disappearance of Egypt bee virus, a fourth distinct master strain of deformed wing virus linked to honeybee mortality in 1970's Egypt

Joachim R. de Miranda, Laura E. Brettell, Nor Chejanovsky, Anna K. Childers, Anne Dalmon, Ward Deboutte, Dirk de Graaf (UGent) , Vincent Doublet, Haftom Gebremedhn, Elke Genersch, et al.

(2022) VIROLOGY JOURNAL. 19(1).
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- PhD Thesis
Molecular and genetic dissection of macrocyclic lactone resistance in the spider mite Tetranychus urticae

Wenxin Xue (UGent)

(2022)
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Beekeepers perception of risks affecting colony loss : a pilot survey

Noemie El Agrebi, Nathalie Steinhauer, Veronique Renault, Dirk de Graaf (UGent) and Claude Saegerman

(2022) TRANSBOUNDARY AND EMERGING DISEASES. 69(2). p.579-590
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- Miscellaneous
Expanding dendritic cell nomenclature in the single-cell era

Florent Ginhoux, Martin Guilliams (UGent) and Miriam Merad

(2022) NATURE REVIEWS IMMUNOLOGY. 22(2). p.67-68
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Coordinate control of basal epithelial cell fate and stem cell maintenance by core EMT transcription factor Zeb1

Yingying Han, Alvaro Villarreal-Ponce, Guadalupe Gutierrez, Quy Nguyen, Peng Sun, Ting Wu, Benjamin Sui, Geert Berx (UGent) , Thomas Brabletz, Kai Kessenbrock, et al.

(2022) CELL REPORTS. 38(2).
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Selectivity and molecular stress responses to classical and botanical acaricides in the predatory mite Phytoseiulus persimilis Athias-Henriot (Acari: Phytoseiidae)

Sabina Bajda-Wybouw (UGent) , Patrick De Clercq (UGent) and Thomas Van Leeuwen (UGent)

(2022) PEST MANAGEMENT SCIENCE. 78(3). p.881-895
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Deubiquitinating enzymes UBP12 and UBP13 stabilize the brassinosteroid receptor BRI1

Yongming Luo, Junpei Takagi, Lucas Alves Neubus Claus (UGent) , Chao Zhang, Shigetaka Yasuda, Yoko Hasegawa, Junji Yamaguchi, Libo Shan, Eugenia Russinova (UGent) and Takeo Sato

(2022) EMBO reports. 23(4).
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Embryo–Endosperm Interactions

Nicolas Doll (UGent) and Gwyneth C. Ingram

(2022) Annual Review of Plant Biology. 73. p.293-321
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- Journal Article
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Impact of heavy metal exposure on biological control of a deadly amphibian pathogen by zooplankton

Arne Deknock (UGent) , Frank Pasmans (UGent) , Robby van Leeuwenberg, Sarah Van Praet (UGent) , Niels De Troyer (UGent) , Tess Goessens (UGent) , Leni Lammens (UGent) , Stijn Bruneel (UGent) , Luc Lens (UGent) , An Martel (UGent) , et al.

(2022) SCIENCE OF THE TOTAL ENVIRONMENT. 823.
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- PhD Thesis
Data mining and modelling to understand cell migration heterogeneity and plasticity

Gwendolien Sergeant (UGent)

(2022)
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Translational profile of developing phellem cells in Arabidopsis thaliana roots

Ana Rita Mendes Leal (UGent) , Pedro Miguel Barros, Boris Parizot (UGent) , Helena Sapeta, Nick Vangheluwe (UGent) , Tonni Grube Andersen, Tom Beeckman (UGent) and M. Margarida Oliveira

(2022) PLANT JOURNAL. 110(3). p.899-915
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Stenotrophomonas sp. SRS1 promotes growth of Arabidopsis and tomato plants under salt stress conditions

Ho Manh Tuong (UGent) , Sonia García Méndez (UGent) , Michiel Vandecasteele (UGent) , Anne Willems (UGent) , Dexian Luo, Stien Beirinckx and Sofie Goormachtig (UGent)

(2022) PLANT AND SOIL. 473(1-2). p.547-571
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Approaches and determinants to sustainably improve crop production

Alain Gojon, Laurent Nussaume, Doan T. Luu, Erik H. Murchie, Alexandra Baekelandt (UGent) , Vandasue Lily Rodrigues Saltenis, Jean‐Pierre Cohan, Thierry Desnos, Dirk Inzé (UGent) , John N. Ferguson, et al.

(2022) Food and Energy Security.
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Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy

Lukas Hoermayer, Jiří Friml and Matous Glanc (UGent)

(2022) Plant cell division : methods and protocols. In Methods in Molecular Biology 2382. p.105-114
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The N-glycosylation-related genes as potential targets for RNAi-mediated pest control of the Colorado potato beetle (Leptinotarsa decemlineata)

Dongdong Liu (UGent) , Kristof De Schutter (UGent) , Pengyu Chen (UGent) and Guy Smagghe (UGent)

(2022) PEST MANAGEMENT SCIENCE.
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Implementation of RNAi-based arthropod pest control : environmental risks, potential for resistance and regulatory considerations

Olivier Christiaens (UGent) , Jeremy Sweet, Teodora Dzhambazova, Isabella Urru, Guy Smagghe (UGent) , Kaloyan Kostov and Salvatore Arpaia

(2022) JOURNAL OF PEST SCIENCE. 95(1). p.1-15
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Developmental O-glycan profile analysis shows pentasaccharide mucin-type O-glycans are linked with pupation of Tribolium castaneum

Weidong Li (UGent) , Kristof De Schutter (UGent) , Els Van Damme (UGent) and Guy Smagghe (UGent)

(2022) ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY. 109(1).
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- PhD Thesis
(Multi)functionality in grasslands undergoing restoration management towards Nardus grasslands

Eva DeCock (UGent)

(2022)
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Engineering a lysin with intrinsic antibacterial activity (LysMK34) by cecropin a fusion enhances its antibacterial properties against acinetobacter baumannii

Karim Abdelkader Soufi Abdelkader (UGent) , Diana Gutierrez Fernandez (UGent) , Héctor Tamés-Caunedo, Patricia Ruas-Madiedo, Amal Safaan, Ahmed S. Khairalla, Yasser Gaber, Tarek Dishisha and Yves Briers (UGent)

(2022) APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 88(1).
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- Journal Article
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Malignant pleural mesothelioma with an EML4-ALK fusion : expect the unexpected!

Fleur Cordier (UGent) , Joni Van der Meulen (UGent) , Nadine Van Roy (UGent) , Jilke De Wilde (UGent) , Herwig van Dijck, Filip Vanhoenacker (UGent) , Marc Lambrechts, Valentin Noyez, Koen Van de Vijver (UGent) , Liesbeth Ferdinande (UGent) , et al.

(2022) PATHOLOGY RESEARCH AND PRACTICE. 231.
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- PhD Thesis
Persuasion is better then force : how Caulobacter RHG1 convinces Arabidopsis thaliana of its beneficial character

Amber Lampens (UGent)

(2022)
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- PhD Thesis
Repression of TMO5/LHW-mediated vascular proliferation in Arabidopsis thaliana

Helena Arents (UGent)

(2022)
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Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen

Shi Hu, Naofumi Kamimura, Shingo Sakamoto, Soichiro Nagano, Naoki Takata, Sarah Liu, Geert Goeminne (UGent) , Ruben Vanholme (UGent) , Mikiko Uesugi, Masanobu Yamamoto, et al.

(2022) The Plant Journal. 110(2). p.358-376
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- open access
The Phloem Intercalated With Xylem-Correlated 3 Receptor-Like Kinase Constitutively Interacts With Brassinosteroid Insensitive 1-Associated Receptor Kinase 1 and Is Involved in Vascular Development in Arabidopsis

Ke Xu (UGent) , Joris Jourquin (UGent) , Maria Njo (UGent) , Long Nguyen (UGent) , Tom Beeckman (UGent) and Ana Fernandez Salina (UGent)

(2022) Frontiers in Plant Science. 12.
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Within and beyond organelle engineering: strategies for increased terpene production in yeasts and plants

Ana Cristina Jaramillo-Madrid, Elia Lacchini (UGent) and Alain Goossens (UGent)

(2022) Current Opinion in Green and Sustainable Chemistry. 33.
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Stress-induced inflammation evoked by immunogenic cell death is blunted by the IRE1 alpha kinase inhibitor KIRA6 through HSP60 targeting

Nicole Rufo, Dimitris Korovesis, Sofie Van Eygen, Rita Derua, Abhishek D. Garg, Francesca Finotello, Monica Vara-Perez, Jan Rozanc, Michael Dewaele, Peter A. de Witte, et al.

(2022) CELL DEATH AND DIFFERENTIATION. 29(1). p.230-245
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- PhD Thesis
Identifying drivers of microbial dynamics in aquaculture : from single-cell technology to metagenomics

Jasmine Heyse (UGent)

(2022)
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- PhD Thesis
Bacterially enhanced plant growing media for controlled environment agriculture

Thijs Van Gerrewey (UGent)

(2022)
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- A1
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Orthogonal proteomics methods to unravel the HOTAIR interactome

Louis Delhaye (UGent) , Edith De Bruycker (UGent) , Pieter-Jan Volders (UGent) , Daria Fijalkowska (UGent) , Delphine De Sutter (UGent) , Sven Degroeve (UGent) , Lennart Martens (UGent) , Pieter Mestdagh (UGent) and Sven Eyckerman (UGent)

(2022) SCIENTIFIC REPORTS. 12(1).
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Pre-existing antibodies directed against a tetramerizing domain enhance the immune response against artificially stabilized soluble tetrameric influenza neuraminidase

João Paulo Portela Catani, Emma R. Job, Tine Ysenbaert, Anouk Smet, Satyajit Ray, Lauren LaRue, Svetlana Stegalkina, Mario Barro, Thorsten U. Vogel and Xavier Saelens

(2022) npj Vaccines.
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- Journal Article
Spicoid morphology of Mapanioideae (Cyperaceae): an evolutionary perspective

Mariana M Monteiro, Diego Demarco, Isabel Larridon (UGent) , Christina J Prychid and Gerhard Prenner

(2022) Botanical Journal of the Linnean Society. 198(2). p.165-185
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- Miscellaneous
- open access
A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics

Bart Van Puyvelde (UGent) , Simon Daled (UGent) , Sander Willems, Ralf Gabriels (UGent) , Anne Gonzalez de Peredo, Karima Chaoui, Emmanuelle Mouton-Barbosa, David Bouyssié, Kurt Boonen, Christopher J. Hughes, et al.

(2022) BioRXiv.
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A comprehensive evaluation of consensus spectrum generation methods in proteomics

Xiyang Luo, Wout Bittremieux, Johannes Griss, Eric W Deutsch, Timo Sachsenberg, Lev I Levitsky, Mark V Ivanov, Julia A Bubis, Ralf Gabriels (UGent) , Henry Webel, et al.

(2022) bioRxiv.
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- PhD Thesis
Bioprospecting and taxonomy of isolates of the class Actinobacteria and the genus Bacillus from aquatic ecosystems of Santiago de Cuba

Miladis Camacho (UGent)

(2022)
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- A1
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Diversity of nematodes on banana (Musa spp.) in Kenya linked to altitude and with a focus on the pathogenicity of Pratylenchus goodeyi

Douglas Nyang’au, Janet Atandi, Laura Cortada-Gonzalez (UGent) , Shem Nchore, Maina Mwangi and Daniel Coyne (UGent)

(2022) NEMATOLOGY. 24(2). p.137-147
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- A1
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Time-based binding as a solution to and a limitation for flexible cognition

Mehdi Senoussi (UGent) , Pieter Verbeke (UGent) and Tom Verguts (UGent)

(2022) FRONTIERS IN PSYCHOLOGY. 12.
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- A1
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Proteomics as a tool to gain next level insights into photo-crosslinkable biopolymer modifications

Nele Pien (UGent) , Fabrice Bray, Tom Gheysens (UGent) , Liesbeth Tytgat, Christian Rolando, Diego Mantovani, Peter Dubruel (UGent) and Sandra Van Vlierberghe (UGent)

(2022) BIOACTIVE MATERIALS. 17. p.204-220
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Homeophasic adaptation in response to UVA radiation in Pseudomonas aeruginosa : changes of membrane fatty acid composition and induction of desA and desB expression

Magdalena Pezzoni, Marleen De Troch (UGent) , Ramón A. Pizarro and Cristina S. Costa

(2022) PHOTOCHEMISTRY AND PHOTOBIOLOGY.
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- PhD Thesis
Unraveling the molecular framework of de novo shoot organogenesis in Arabidopsis thaliana

Robin Lardon (UGent)

(2022)
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- A2
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On the pivotal role of water potential to model plant physiological processes

Tom De Swaef, Olivier Pieters (UGent) , Simon Appeltans (UGent) , Irene Borra-Serrano, Willem Coudron (UGent) , Valentin Couvreur, Sarah Garré, Peter Lootens, Bart Nicolaï, Leroi Pols, et al.

(2022) IN SILICO PLANTS. 4(1).
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- PhD Thesis
Uranium resistance mechanisms in Cupriavidus metallidurans : from environmental relevance to potential applications

Tom Rogiers (UGent)

(2022)
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- PhD Thesis
Exploring the structure-function relationship of C2-epimerases

Matthieu Da Costa (UGent)

(2022)
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- A1
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Recent advancements in tracking bacterial effector protein translocation

Julie Braet (UGent) , Dominiek Catteeuw (UGent) and Petra Van Damme (UGent)

(2022) MICROORGANISMS. 10(2).
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Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Viacheslav Mylka (UGent) , Irina Matetovici, Suresh Poovathingal, Jeroen Aerts, Niels Vandamme (UGent) , Ruth Seurinck (UGent) , Kevin Verstaen (UGent) , Gert Hulselmans, Silvie van den Hoecke, Isabelle Scheyltjens, et al.

(2022) GENOME BIOLOGY. 23(1).
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- Conference Paper
- C3
Influence of nitrogen source on sophorolipid biosynthesis by Starmerella bombicola

Goedele Luyten (UGent) , Elvira Bytyqi, Sofie De Maeseneire (UGent) , Sophie Roelants (UGent) and Wim Soetaert (UGent)

(2022) Annual Symposium of the Belgian Society for Microbiology, Abstracts.
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- PhD Thesis
Developing methods for the production of antiviral VHH-Fc antibodies in Pichia pastoris for fast pandemic response

Chiara Lonigro (UGent)

(2022)
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- PhD Thesis
Single domain antibodies to probe the antiviral function of human MxA

Eline Soetens (UGent)

(2022)
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- PhD Thesis
The evolution and function of integumentary melanin

Michaël Nicolaï (UGent)

(2022)
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- PhD Thesis
From captured carbon to food : assessing production routes, cultivation strategies and their impact on the yield and quality of microbial protein from C1 compounds

Myrsini Sakarika (UGent)

(2022)
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- Journal Article
- A1
Viral manipulation of host cell necroptosis and pyroptosis

Simon Verdonck (UGent) , Josephine Nemegeer (UGent) , Peter Vandenabeele (UGent) and Jonathan Maelfait (UGent)

(2022) TRENDS IN MICROBIOLOGY.
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Rothia mucilaginosa is an anti-inflammatory bacterium in the respiratory tract of patients with chronic lung disease

Charlotte Rigauts (UGent) , Juliana Aizawa, Steven Taylor, Geraint B. Rogers, Matthias Govaerts, Paul Cos, Lisa Ostyn (UGent) , Sarah Sims, Eva Vandeplassche, Mozes Sze (UGent) , et al.

(2022) EUROPEAN RESPIRATORY JOURNAL. 59(5).
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- Journal Article
Deterministic scRNA-seq captures variation in intestinal crypt and organoid composition

Johannes Bues, Marjan Biocanin, Joern Pezoldt, Riccardo Dainese, Antonius Chrisnandy, Saba Rezakhani, Wouter Saelens, Vincent Gardeux, Revant Gupta, Rita Sarkis, et al.

(2022) NATURE METHODS.
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- Miscellaneous
IFN-gamma(g)uarding the niche-keeping ILC2 in check

Ursula Smole (UGent) and Hamida Hammad (UGent)

(2022) IMMUNITY. 55(2). p.190-192
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The impact of systemic inflammation on Alzheimer's disease pathology

Junhua Xie (UGent) , Lien Van Hoecke (UGent) and Roosmarijn Vandenbroucke (UGent)

(2022) FRONTIERS IN IMMUNOLOGY. 12.
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Activation of fibroblasts in skin cancer

Lisette Van Hove (UGent) and Esther Hoste (UGent)

(2022) JOURNAL OF INVESTIGATIVE DERMATOLOGY. 142(4). p.1026-1031
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- PhD Thesis
Nutrient digestibility and predicting the energy content of pig feeds

Louis Paternostre (UGent)

(2022)
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Osmotic adjustment in wheat (Triticum aestivum l.) during pre- and post-anthesis drought

Sarah Verbeke (UGent) , Carmen Maria Padilla Diaz (UGent) , Geert Haesaert and Kathy Steppe (UGent)

(2022) FRONTIERS IN PLANT SCIENCE. 13.
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- Miscellaneous
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Editorial : micronutrients : the borderline between their beneficial role and toxicity in plants

Antonios Chrysargyris, Monica Höfte (UGent) , Nikos Tzortzakis, Spyridon A. Petropoulos and Francesco Di Gioia

(2022) FRONTIERS IN PLANT SCIENCE. 13.
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Pseudomonas lipopeptide-mediated biocontrol : chemotaxonomy and biological activity

Feyisara Eyiwumi Oni (UGent) , Qassim Esmaeel, Joseph Tobias Onyeka, Rasheed Adeleke, Cedric Jacquard, Christophe Clement, Harald Gross, Essaid Ait Barka and Monica Höfte (UGent)

(2022) MOLECULES. 27(2).
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- PhD Thesis
Electrochemical detection of two selected insecticides imidacloprid and fipronil in water and eggs

Suzan El-Akaad (UGent)

(2022)
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TIM3+ TRBV11-2 T cells and IFNγ signature in patrolling monocytes and CD16+ NK cells delineate MIS-C

Levi Hoste (UGent) , Lisa Roels (UGent) , Leslie Naesens (UGent) , Victor Bosteels (UGent) , Stijn Vanhee (UGent) , Sam Dupont (UGent) , Cedric Bosteels (UGent) , Robin Browaeys (UGent) , Niels Vandamme (UGent) , Kevin Verstaen (UGent) , et al.

(2022) JOURNAL OF EXPERIMENTAL MEDICINE. 219(2).
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The evolutionary history of the Caribbean magnolias (Magnoliaceae) : testing species delimitations and biogeographical hypotheses using molecular data

Emily Veltjen (UGent) , Ernesto Testé, Alejandro Palmarola Bejerano, Pieter Asselman (UGent) , Majela Hernández Rodríguez, Luis Roberto González Torres, Lars Chatrou (UGent) , Paul Goetghebeur (UGent) , Isabel Larridon (UGent) and Marie-Stéphanie Samain (UGent)

(2022) MOLECULAR PHYLOGENETICS AND EVOLUTION. 167.
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PeacoQC : peak-based selection of high quality cytometry data

Annelies Emmaneel (UGent) , Katrien Quintelier (UGent) , Dorine Sichien (UGent) , Paulina Rybakowska, Concepcion Maranon, Marta E. Alarcon-Riquelme, Gert Van Isterdael (UGent) , Sofie Van Gassen (UGent) and Yvan Saeys (UGent)

(2022) CYTOMETRY PART A. 101(4). p.325-338
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PLAZA 5.0 : extending the scope and power of comparative and functional genomics in plants

Michiel Van Bel, Francesca Silvestri (UGent) , Eric M Weitz, Lukasz Kreft, Alexander Botzki (UGent) , Frederik Coppens (UGent) and Klaas Vandepoele (UGent)

(2022) NUCLEIC ACIDS RESEARCH. 50(D1). p.D1468-D1474
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The neighborhood of the Spike gene is a hotspot for modular intertypic homologous and nonhomologous recombination in Coronavirus genomes

Marios Nikolaidis, Panayotis Markoulatos, Yves Van de Peer (UGent) , Stephen G Oliver and Grigorios D Amoutzias

(2022) MOLECULAR BIOLOGY AND EVOLUTION. 39(1).
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Mutually opposing activity of PIN7 splicing isoforms is required for auxin‐mediated tropic responses in Arabidopsis thaliana

Ivan Kashkan, Mónika Hrtyan, Katarzyna Retzer, Jana Humpolíčková, Aswathy Jayasree, Roberta Filepová, Zuzana Vondráková, Sibu Simon, Debbie Rombaut (UGent) , Thomas Jacobs (UGent) , et al.

(2022) NEW PHYTOLOGIST. 233(1). p.329-343
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Insights of metallic nanoparticles and ions in accelerating the bacterial uptake of antibiotic resistance genes

Shuai Zhang, Ji Lu, Yue Wang, Willy Verstraete (UGent) , Zhiguo Yuan and Jianhua Guo

(2022) JOURNAL OF HAZARDOUS MATERIALS. 421.
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Enthusiasm, concern and ambivalence in the Belgian public’s attitude towards in-vitro gametogenesis

Heidi Mertes (UGent) , Tina Goethals (UGent) , Seppe Segers (UGent) , Marie Huysentruyt (UGent) , Guido Pennings (UGent) and Veerle Provoost (UGent)

(2022) REPRODUCTIVE BIOMEDICINE & SOCIETY ONLINE. 14. p.156-168
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Behavioral strategies and the spatial pattern formation of nesting

Femke Batsleer (UGent) , Dirk Maes and Dries Bonte (UGent)

(2022) AMERICAN NATURALIST. 199(1). p.E15-E27
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Co-cultivation enhanced microbial protein production based on autotrophic nitrogen-fixing hydrogen-oxidizing bacteria

Xiaona Hu (UGent) , Peter Vandamme (UGent) and Nico Boon (UGent)

(2022) CHEMICAL ENGINEERING JOURNAL. 429.
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Volumetric overestimation of small branches in 3D reconstructions of Fraxinus excelsior

Miro Demol (UGent) , Phil Wilkes, Pasi Raumonen, Sruthi Krishna Moorthy Parvathi (UGent) , Kim Calders (UGent) , Bert Gielen and Hans Verbeeck (UGent)

(2022) SILVA FENNICA. 56(1).
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- PhD Thesis
Unravelling of the sesquiterpene lactone biosynthetic pathway in Cichorium intybus using CRISPR/Cas9 genome editing

Charlotte De Bruyn (UGent)

(2022)
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Vertical distribution of trunk and crown volume in tropical trees

Daniel Zuleta, Sruthi Krishna Moorthy Parvathi (UGent) , Gabriel Arellano, Hans Verbeeck (UGent) and Stuart J. Davies

(2022) FOREST ECOLOGY AND MANAGEMENT. 508.
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A cytosolic disulfide bridge-supported dimerization is crucial for stability and cellular distribution of Coxsackievirus B3 protein 3A

M Voss, G Kleinau, N Gimber, K Janek, C Bredow, Fabien Henri Thery (UGent) , Francis Impens (UGent) , J Schmoranzer, P Scheerer, PM Kloetzel, et al.

(2022) FEBS JOURNAL.
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Packaging research artefacts with RO-Crate

Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens (UGent) , José M. Fernández, Daniel Garijo, Björn Grüning, Marco La Rosa, Simone Leo, et al.

(2022) Data Science.
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Genetic Variability of Arabidopsis thaliana Mature Root System Architecture and Genome-Wide Association Study

Agnieszka Deja-Muylle (UGent) , Davy Opdenacker (UGent) , Boris Parizot (UGent) , Hans Motte (UGent) , Guillaume Lobet, Veronique Storme (UGent) , Pieter Clauw (UGent) , Maria Njo (UGent) and Tom Beeckman (UGent)

(2022) Frontiers in Plant Science. 12.
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Auxin analog-induced Ca 2+ signaling is not involved in inhibition of endosomal aggregation in Arabidopsis roots

Ren Wang (UGent) , Ellie Himschoot (UGent) , Matteo Grenzi, Jian Chen (UGent) , Alaeddine Safi (UGent) , Melanie Krebs, Karin Schumacher, Moritz Nowack (UGent) , Wolfgang Moeder, Keiko Yoshioka, et al.

(2022) JOURNAL OF EXPERIMENTAL BOTANY. 73(8). p.2308-2319
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Development and validation of a reliable UHPLC-MS/MS method for simultaneous quantification of Macrocyclic lactones in bovine plasma

Gemechu Zeleke, Siegrid De Baere (UGent) , Sultan Suleman and Mathias Devreese (UGent)

(2022) MOLECULES. 27(3).
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CpG transformer for imputation of single-cell methylomes

Gaetan De Waele (UGent) , Jim Clauwaert (UGent) , Gerben Menschaert (UGent) and Willem Waegeman (UGent)

(2022) BIOINFORMATICS. 38(3). p.597-603
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Dissecting the Role of SAL1 in Metabolizing the Stress Signaling Molecule 3′-Phosphoadenosine 5′-Phosphate in Different Cell Compartments

Natallia Ashykhmina, Kai Xun Chan (UGent) , Henning Frerigmann, Frank Van Breusegem (UGent) , Stanislav Kopriva, Ulf-Ingo Flügge and Tamara Gigolashvili

(2022) Frontiers in Molecular Biosciences. 8.
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The state of complement in COVID-19

Behdad Afzali, Marina Noris, Bart Lambrecht (UGent) and Claudia Kemper

(2022) NATURE REVIEWS IMMUNOLOGY. 22. p.77-84
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Plasma membrane perforation by GSDME during apoptosis-driven secondary necrosis

Elke De Schutter (UGent) , Jana Ramon (UGent) , Benjamin Pfeuty, Caroline De Tender (UGent) , Stephan Stremersch (UGent) , Koen Raemdonck (UGent) , Ken Op de Beeck, Wim Declercq (UGent) , Franck Riquet (UGent) , Kevin Braeckmans (UGent) , et al.

(2022) CELLULAR AND MOLECULAR LIFE SCIENCES. 79(1).
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- PhD Thesis
Enzyme colocalisation on synthetic protein scaffolds : a VersaTile approach

Julie Vanderstraeten (UGent)

(2022)
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NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis

Tomasz Bieluszewski, Weronika Sura, Wojciech Dziegielewski, Anna Bieluszewska, Catherine Lachance, Michał Kabza, Maja Szymanska-Lejman, Mateusz Abram, Piotr Wlodzimierz, Nancy De Winne (UGent) , et al.

(2022) NATURE COMMUNICATIONS. 13.
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Tripartite hormonal regulation of plasma membrane H+-ATPase activity

Rui Miao, Eugenia Russinova (UGent) and Pedro L. Rodriguez

(2022) Trends in Plant Science. 23(6). p.588-600
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Genomes shed light on the evolution of Begonia , a mega‐diverse genus

Lingfei Li, Xiaoli Chen, Dongming Fang, Shanshan Dong, Xing Guo, Na Li, Lucia Campos‐Dominguez, Wenguang Wang, Yang Liu, Xiaoan Lang, et al.

(2022) New Phytologist.
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Real-world efficacy and safety of apremilast in Belgian patients with psoriatic arthritis : results from the prospective observational APOLO study

Kurt de Vlam, Adrien Nzeusseu Toukap, Marie-Joelle Kaiser, Johan Vanhoof, Philip Remans, Marthe Van den Berghe, Silvana Di Romana, Filip Van den Bosch (UGent) and Rik Lories

(2022) ADVANCES IN THERAPY. 39. p.1055-1067
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B1‐type cyclins control microtubule organization during cell division in Arabidopsis

Mariana Romeiro Motta, Xin’Ai Zhao, Martine Pastuglia, Katia Belcram, Farshad Roodbarkelari, Maki Komaki, Hirofumi Harashima, Shinichiro Komaki, Manoj Kumar, Petra Bulánková (UGent) , et al.

(2022) EMBO REPORTS. 23(1).
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Field-grown soybean shows genotypic variation in physiological and seed composition responses to heat stress during seed development

Anna C. Ortiz, Ive De Smet (UGent) , Rosangela Sozzani and Anna M. Locke

(2022) Environmental and Experimental Botany. 195.
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The gene regulation knowledge commons : the action area of GREEKC

Martin Kuiper, Joseph Bonello, Jesualdo T. Fernández-Breis, Philipp Bucher, Matthias E. Futschik, Pascale Gaudet, Ivan V. Kulakovskiy, Luana Licata, Colin Logie, Ruth C. Lovering, et al.

(2022) BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. 1865(1).
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Genomic and Metabolomic Analyses of the Marine Fungus Emericellopsis cladophorae: Insights into Saltwater Adaptability Mechanisms and Its Biosynthetic Potential

Micael F. M. Gonçalves, Sandra Hilário, Yves Van de Peer (UGent) , Ana C. Esteves and Artur Alves

(2022) Journal of Fungi. 8(1).
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Toward a refined insight into the importance of volunteers’ motivations for need-based experiences, job satisfaction, work effort, and turnover intentions in nonprofit sports clubs : a person-centered approach

Tom De Clerck (UGent) , Annick Willem (UGent) , Katrien De Cocker (UGent) and Leen Haerens (UGent)

(2022) VOLUNTAS.
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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

Martin Guilliams (UGent) , Johnny Bonnardel (UGent) , Birthe Haest (UGent) , Bart Vanderborght (UGent) , Camille Wagner (UGent) , Anneleen Remmerie (UGent) , Anna Bujko (UGent) , Liesbet Martens (UGent) , Tinne Thoné (UGent) , Robin Browaeys (UGent) , et al.

(2022) CELL. 185(2). p.379-396
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Effectiveness of a lesson study intervention on teacher behaviour and student motivation in physical education lessons

Lars Borghouts, Menno Slingerland, Gwen Weeldenburg, Bregje van Dijk-van Eijk, Sara Laurijssens, Teun Remmers and Leen Haerens (UGent)

(2022) PHYSICAL EDUCATION AND SPORT PEDAGOGY.
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Gelatin methacryloyl as environment for chondrocytes and cell delivery to superficial cartilage defects

Katja Hoelzl, Marian Fuersatz, Hakan Goecerler, Barbara Schaedl, Sara Zigon-Branc, Marica Markovic, Claudia Gahleitner, Jasper Van Hoorick (UGent) , Sandra Van Vlierberghe (UGent) , Anne Kleiner, et al.

(2022) JOURNAL OF TISSUE ENGINEERING AND REGENERATIVE MEDICINE. 16(2). p.207-222
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Established populations of the indoor silverfish Lepisma saccharinum (Insecta: Zygentoma) in red wood ant nests

Ruben Claus, Pieter Vantieghem (UGent) , Rafael Molero-Baltanás and Thomas Parmentier (UGent)

(2022) BELGIAN JOURNAL OF ZOOLOGY. 152. p.45-53
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Spatio-temporal development of suberized barriers in cork oak taproots

Ana Rita Mendes Leal (UGent) , Helena Sapeta, Tom Beeckman (UGent) , Pedro M Barros and M Margarida Oliveira

(2022) Tree Physiology. 42(6). p.1269-1285
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CIN-like TCP13 is essential for plant growth regulation under dehydration stress

Kaoru Urano, Kyonoshin Maruyama, Tomotsugu Koyama, Nathalie Gonzalez, Dirk Inzé (UGent) , Kazuko Yamaguchi-Shinozaki and Kazuo Shinozaki

(2022) Plant Molecular Biology.
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Electrified bioreactors : the next power-up for biometallurgical wastewater treatment

Pieter Ostermeyer (UGent) , Luiza Bonin (UGent) , Luis Fernando Leon-Fernandez, Xochitl Dominguez-Benetton, Tom Hennebel (UGent) and Korneel Rabaey (UGent)

(2022) MICROBIAL BIOTECHNOLOGY. 15(3). p.755-772
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LeafNet: A Tool for Segmenting and Quantifying Stomata and Pavement Cells

Shaopeng Li, Linmao Li, Weiliang Fan, Suping Ma, Cheng Zhang (UGent) , Jang Chol Kim, Kun Wang, Eugenia Russinova (UGent) , Yuxian Zhu and Yu Zhou

(2022) The Plant Cell. 34(4). p.1171-1188
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The role of biofilm formation in the pathogenesis and antimicrobial susceptibility of Cutibacterium acnes

Tom Coenye (UGent) , Karl-Jan Spittaels (UGent) and Yvonne Achermann

(2022) BIOFILM. 4.
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ROPGAP-dependent interaction between brassinosteroid and ROP2-GTPase signaling controls pavement cell shape in Arabidopsis

Cheng Zhang (UGent) , Theresa Lauster, Wenxin Tang, Anaxi Houbaert, Shanshuo Zhu, Dominique Eeckhout (UGent) , Ive De Smet (UGent) , Geert De Jaeger (UGent) , Thomas Jacobs (UGent) , Tongda Xu, et al.

(2022) CURRENT BIOLOGY. 32(3). p.518-531
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A novel calibration strategy based on isotopic distribution for high-throughput quantitative analysis of pesticides and veterinary drugs using LC-HRMS

Feifei Sun, Haiguang Tan, Mohamed Fathi Abdallah (UGent) , Yanshen Li, Jinhui Zhou, Yi Li and Shupeng Yang

(2022) JOURNAL OF HAZARDOUS MATERIALS. 430.
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BioCCP.jl : collecting coupons in combinatorial biotechnology

Kirsten Van Huffel (UGent) , Michiel Stock (UGent) and Bernard De Baets (UGent)

(2022) BIOINFORMATICS. 38(4). p.1144-1145
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- PhD Thesis
A sweet story : exploring microbial enzymes for the biocatalytic production of rare sugars and their in vitro digestibility

Shari Dhaene (UGent)

(2022)
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The impact of the multichannel quorum sensing systems of Vibrio tasmaniensis and Vibrio crassostreae on virulence towards blue mussel (Mytilus edulis) larvae

Shikder Saiful Islam, Shanshan Zhang (UGent) , Mieke Eggermont (UGent) , Maxime Bruto, Frederique Le Roux and Tom Defoirdt (UGent)

(2022) AQUACULTURE. 547.
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Contribution to the understanding of the bacteriophage-host interaction for phage therapy against avian pathogenic Escherichia coli (APEC)

Patricia Espenhain Sørensen (UGent)

(2022)
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- open access
Reservoir computing with plants

Olivier Pieters (UGent)

(2022)
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The cardiovascular system in space : focus on in vivo and in vitro studies

Ronni Baran, Shannon Marchal, Sebastian Garcia Campos, Emil Rehnberg, Kevin Tabury, Bjorn Baselet, Markus Wehland, Daniela Grimm and Sarah Baatout (UGent)

(2022) BIOMEDICINES. 10(1).
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Do tree species affect decadal changes in soil organic carbon and total nitrogen stocks in Danish common garden experiments?

Christina Steffens, Christian Beer, Stephanie Schelfhout (UGent) , An De Schrijver (UGent) , Eva‐Maria Pfeiffer and Lars Vesterdal

(2022) EUROPEAN JOURNAL OF SOIL SCIENCE. 73(1).
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Litter quality, mycorrhizal association, and soil properties regulate effects of tree species on the soil fauna community

Yan Peng, Martin Holmstrup, Inger Kappel Schmidt, An De Schrijver (UGent) , Stephanie Schelfhout (UGent) , Petr Heděnec, Haifeng Zheng, Luciana Ruggiero Bachega, Kai Yue and Lars Vesterdal

(2022) GEODERMA. 407.
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To new beginnings : riboproteogenomics discovery of N-terminal proteoforms in Arabidopsis thaliana

Patrick Willems (UGent) , Elvis Ndah (UGent) , Veronique Jonckheere (UGent) , Frank Van Breusegem (UGent) and Petra Van Damme (UGent)

(2022) FRONTIERS IN PLANT SCIENCE. 12.
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Vibriosis in bivalve larvae : infection process and host defense

Dongdong Wang (UGent)

(2022)
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Divergence of Active Site Motifs among Different Classes of Populus Glutaredoxins Results in Substrate Switches

Hui Xu, Zhen Li (UGent) , Peng‐Fei Jiang, Li Zhao, Chang Qu, Yves Van de Peer (UGent) , Yan‐Jing Liu and Qing‐Yin Zeng

(2022) The Plant Journal. 110(1). p.129-146
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Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

Xiaojie Liu (UGent) , Jonas Blomme (UGent) , Kenny Bogaert (UGent) , Sofie D'hondt (UGent) , Thomas Wichard, Dieter Deforce (UGent) , Filip Van Nieuwerburgh (UGent) and Olivier De Clerck (UGent)

(2022) BMC PLANT BIOLOGY. 22(1).
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Nearby transposable elements impact plant stress gene regulatory networks : a meta-analysis in A. thaliana and S. lycopersicum

Jan Deneweth, Yves Van de Peer (UGent) and Vanessa Vermeirssen (UGent)

(2022) BMC GENOMICS. 23(1).
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A bioanalytical screening method for Enterococcus faecalis RNPP-type quorum sensing peptides in murine feces

Frederick Verbeke (UGent) , Nathan Debunne (UGent) , Yorick Janssens (UGent) , Bart De Spiegeleer (UGent) and Evelien Wynendaele (UGent)

(2022) BIOANALYSIS. 14(3). p.151-167
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A Bayesian Belief Network learning tool integrates multi-scale effects of riparian buffers on stream invertebrates

Marie Anne Eurie Forio (UGent) , Francis J. Burdon, Niels De Troyer (UGent) , Koen Lock (UGent) , Felix Witing, Lotte Baert (UGent) , Nancy De Saeyer (UGent) , Geta Rîșnoveanu, Cristina Popescu, Benjamin Kupilas, et al.

(2022) SCIENCE OF THE TOTAL ENVIRONMENT. 810.
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BCG-mediated protection against M. tuberculosis is sustained post-malaria infection independent of parasite virulence

Emily Tangie, Avril Walters, Nai‐jen Hsu, Michelle Fisher, Stefan Magez (UGent) , Muazzam Jacobs and Roanne Keeton

(2022) IMMUNOLOGY. 165(2). p.219-233
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Forest understorey communities respond strongly to light in interaction with forest structure, but not to microclimate warming

Karen De Pauw (UGent) , Pieter Sanczuk (UGent) , Camille Meeussen (UGent) , Leen Depauw (UGent) , Emiel De Lombaerde (UGent) , Sanne Govaert (UGent) , Thomas Vanneste (UGent) , Jorg Brunet, Sara A. O. Cousins, Cristina Gasperini, et al.

(2022) NEW PHYTOLOGIST. 233(1). p.219-235
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Hydroxycinnamic acid‐modified xylan side chains and their cross‐linking products in rice cell walls are reduced in the Xylosyl arabinosyl substitution of xylan 1 mutant

Carolina Feijao, Kris Morreel (UGent) , Nadine Anders, Theodora Tryfona, Marta Busse‐Wicher, Toshihisa Kotake, Wout Boerjan (UGent) and Paul Dupree

(2022) The Plant Journal. 109(5). p.1152-1167
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Cell cycle checkpoint control in response to DNA damage by environmental stresses

José Antonio Pedroza-Garcia (UGent) , Yanli Xiang (UGent) and Lieven De Veylder (UGent)

(2022) PLANT JOURNAL. 109(3). p.490-507
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Increasing yield on dry fields: molecular pathways with growing potential

Rubén Tenorio Berrio (UGent) , Hilde Nelissen (UGent) , Dirk Inzé (UGent) and Marieke Dubois (UGent)

(2022) The Plant Journal. 109(2). p.323-341
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Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density

Sylwia Magdalena Struk (UGent) , Lukas Braem, Cedrick Matthys (UGent) , Alan Walton (UGent) , Nick Vangheluwe (UGent) , Stan Van Praet, Lingxiang Jiang (UGent) , Pawel Radoslaw Baster (UGent) , Carolien De Cuyper, François-Didier Boyer, et al.

(2022) PLANT AND CELL PHYSIOLOGY. 63(1). p.104-119
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Auxin-Responsive (Phospho)proteome Analysis Reveals Key Biological Processes and Signaling Associated with Shoot-Borne Crown Root Development in Rice

Harshita Singh, Zeenu Singh, Tingting Zhu (UGent) , Xiangyu Xu (UGent) , Bhairavnath Waghmode, Tushar Garg, Shivani Yadav, Debabrata Sircar, Ive De Smet (UGent) and Shri Ram Yadav

(2022) Plant and Cell Physiology.
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Drops join to make a stream : high‐throughput nanoscale cultivation to grasp the lettuce root microbiome

Antoine Persyn (UGent) , André Mueller and Sofie Goormachtig (UGent)

(2022) ENVIRONMENTAL MICROBIOLOGY REPORTS. 14(1). p.60-69
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Potential protein markers in children with Autistic Spectrum Disorder (ASD) revealed by salivary proteomics

Francisco S.B. Mota, Kyria S. Nascimento, Messias V. Oliveira, Vinicius Jose Da Silva Osterne (UGent) , Joana C.M. Clemente, Cornevile Correia-Neto, Abelardo B. Lima-Neto, Mauricio F. van Tilburg, Jose H. Leal-Cardoso, Maria I.F. Guedes, et al.

(2022) INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. 199. p.243-251
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Cancer studies under space conditions : finding answers abroad

José Luis Cortés-Sánchez, Jonas Callant, Marcus Krüger, Jayashree Sahana, Armin Kraus, Bjorn Baselet, Manfred Infanger, Sarah Baatout (UGent) and Daniela Grimm

(2022) BIOMEDICINES. 10(1).
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Digital phagograms: predicting phage infectivity through a multilayer machine learning approach

Cédric Lood, Dimitri Boeckaerts (UGent) , Michiel Stock (UGent) , Bernard De Baets (UGent) , Rob Lavigne, Vera van Noort and Yves Briers (UGent)

(2022) CURRENT OPINION IN VIROLOGY. 52. p.174-181
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Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues

Aniko Meijer (UGent) , Tim De Meyer (UGent) , Klaas Vandepoele (UGent) and Tina Kyndt (UGent)

(2022) BMC GENOMICS. 23(1).
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SlKIX8 and SlKIX9 are negative regulators of leaf and fruit growth in tomato

Gwen Swinnen, Jean-Philippe Mauxion, Alexandra Baekelandt (UGent) , Rebecca De Clercq (UGent) , Jan Van Doorsselaere, Dirk Inzé (UGent) , Nathalie Gonzalez, Alain Goossens (UGent) and Laurens Pauwels (UGent)

(2022) PLANT PHYSIOLOGY. 188(1). p.382-396
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Engineering transcriptional regulation in Escherichia coli using an archaeal TetR-family transcription factor

David Sybers, Amber Joka Bernauw, Diala El Masri, Hassan Ramadan Maklad, Daniel Charlier, Marjan De Mey (UGent) , Indra Bervoets and Eveline Peeters

(2022) GENE. 809.
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Liana optical traits increase tropical forest albedo and reduce ecosystem productivity

Félicien Meunier (UGent) , Marco D. Visser, Alexey Shiklomanov, Michael C. Dietze, J. Antonio Guzmán Q., G. Arturo Sanchez‐Azofeifa, Hannes P. T. De Deurwaerder, Sruthi M. Krishna Moorthy, Stefan A. Schnitzer, David C. Marvin, et al.

(2022) GLOBAL CHANGE BIOLOGY. 28(1). p.227-244
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In depth analysis on the carbohydrate-binding properties of a vasorelaxant lectin from Dioclea lasiophylla Mart Ex. Benth seeds

Benildo Sousa Cavada, Vanir Reis Pinto-Junior, Vinicius Jose Da Silva Osterne (UGent) , Messias Vital Oliveira, Ivanice Bezerra Silva, Eva Pollyanna Peixe Laranjeira, Alana Freitas Pires, Jorge Luiz Coelho Domingos, Wandemberg Paiva Ferreira, Jeanlex Soares Sousa, et al.

(2022) JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS.
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Height-diameter allometric equations of an emergent tree species from the Congo Basin

Chadrack Kafuti (UGent) , Jan Van den Bulcke (UGent) , Hans Beeckman, Joris Van Acker (UGent) , Wannes Hubau (UGent) , Tom De Mil (UGent) , Hulda Hatakiwe, Brice Yannick DJIOFACK (UGent) , Adeline Fayolle, Grace Jopaul Loubota Panzou, et al.

(2022) FOREST ECOLOGY AND MANAGEMENT. 504.
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Rapid conservation evidence for the impact of sheep grazing on a threatened digger wasp

Femke Batsleer (UGent) , Jan Van Uytvanck, Johan Lamaire, Dirk Maes and Dries Bonte (UGent)

(2022) INSECT CONSERVATION AND DIVERSITY. 15(1). p.149-156
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Inhibitory control, exploration behaviour and manipulated ecological context are associated with foraging flexibility in the great tit

Jenny R. Coomes, Gabrielle L. Davidson, Michael S. Reichert, Ipek G. Kulahci, Camille Troisi (UGent) and John L. Quinn

(2022) JOURNAL OF ANIMAL ECOLOGY. 91(2). p.320-333
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Efficacy and biosafety assessment of neuropeptide CAPA analogues against the peach-potato aphid (Myzus persicae)

Yan Shi, Ronald J. Nachman, Shunhua Gui (UGent) , Niels Piot (UGent) , Krzysztof Kaczmarek, Janusz Zabrocki, Julian A. T. Dow, Shireen‐A. Davies and Guy Smagghe (UGent)

(2022) INSECT SCIENCE.
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Comparison of antifungal activity of essential oils of clove, lemongrass and thyme for natural preservation of dried apricots

Els Debonne (UGent) , Merve Silanur Yilmaz, Ozge Sakiyan and Mia Eeckhout (UGent)

(2022) FOOD SCIENCE AND TECHNOLOGY INTERNATIONAL.
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The Blue Survey : validation of an instrument to measure ocean literacy among adults

Evelyn Paredes Coral (UGent) , Tim Deprez (UGent) , Melita Mokos, Ann Vanreusel (UGent) and Henk Roose (UGent)

(2022) MEDITERRANEAN MARINE SCIENCE. 23(2). p.321-326
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Imaging proxies for plant physiology-related traits in an automated plant phenotyping platform

Stien Mertens (UGent)

(2022)
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A large scale mass spectrometry-based histone screening for assessing epigenetic developmental toxicity

Sigrid Verhelst (UGent) , Bart Van Puyvelde (UGent) , Sander Willems, Simon Daled (UGent) , Senne Cornelis (UGent) , Laura Corveleyn (UGent) , Ewoud Willems, Dieter Deforce (UGent) , Laura De Clerck (UGent) and Maarten Dhaenens (UGent)

(2022) SCIENTIFIC REPORTS. 12(1).
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The virulome of Streptomyces scabiei in response to cello-oligosaccharide elicitors

Benoit Deflandre, Nudzejma Stulanovic, Sören Planckaert (UGent) , Sinaeda Anderssen, Beatrice Bonometti, Latifa Karim, Wouter Coppieters, Bart Devreese (UGent) and Sébastien Rigali

(2022) MICROBIOL GENOMICS. 8(1).
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Quantifying song behavior in a free-living, light-weight, mobile bird using accelerometers

Elena Eisenring, Marcel Eens, Jean‐Nicolas Pradervand, Alain Jacot, Jan Baert (UGent) , Eddy Ulenaers, Michiel Lathouwers and Ruben Evens

(2022) ECOLOGY AND EVOLUTION. 12(1).
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miR-511 Deficiency Protects Mice from Experimental Colitis by Reducing TLR3 and TLR4 Responses via WD Repeat and FYVE-Domain-Containing Protein 1

Shafaque Rahman, Jolien Vandewalle (UGent) , Patricia H. P. van Hamersveld, Caroline Verseijden, Olaf Welting, Aldo Jongejan, Pierina Casanova, Sybren L. Meijer, Claude Libert (UGent) , Theodorus B. M. Hakvoort, et al.

(2022) CELLS. 11(1).
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Bacillus anthracis induces NLRP3 inflammasome activation and caspase-8-mediated apoptosis of macrophages to promote lethal anthrax

Filip Van Hauwermeiren (UGent) , Nina Van Opdenbosch (UGent) , Hanne Van Gorp (UGent) , Nathalia de Vasconcelos, Geert van Loo (UGent) , Peter Vandenabeele (UGent) , Thirumala-Devi Kanneganti and Mohamed Lamkanfi (UGent)

(2022) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 119(2).
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Hybrid NaYF4:Er,Yb@NaYF4@nano-MOF@AuNPs@LB composites for Yb3+-Er3+ physiological thermometry

Hannes Rijckaert (UGent) , Simona Premcheska (UGent) , Sonali Mohanty (UGent) , Joost Verduijn (UGent) , Andre Skirtach (UGent) and Anna Kaczmarek (UGent)

(2022) PHYSICA B-CONDENSED MATTER. 626.
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Reprogramming of glucocorticoid receptor function by hypoxia

Tineke Vanderhaeghen (UGent) , Steven Timmermans (UGent) , Deepika Watts, Ville Paakinaho, Melanie Eggermont (UGent) , Jolien Vandewalle (UGent) , Charlotte Wallaeys (UGent) , Lise Van Wyngene, Kelly Van Looveren, Louise Nuyttens (UGent) , et al.

(2022) EMBO REPORTS. 23(1).
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Approaches towards tissue‐selective pharmacology of the mineralocorticoid receptor

Dorien Clarisse (UGent) , Lisa Deng, Karolien De Bosscher (UGent) and Achim Lother

(2022) BRITISH JOURNAL OF PHARMACOLOGY.
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- Miscellaneous
Auxin’s origin : do PILS hold the key?

Kenny Bogaert (UGent) , Jonas Blomme (UGent) , Tom Beeckman (UGent) and Olivier De Clerck (UGent)

(2022) TRENDS IN PLANT SCIENCE. 27(3). p.227-236
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SEVAtile : a standardised DNA assembly method optimised for Pseudomonas

Eveline‐Marie Lammens, Maarten Boon, Dennis Grimon (UGent) , Yves Briers (UGent) and Rob Lavigne

(2022) MICROBIAL BIOTECHNOLOGY. 15(1). p.370-386
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Directional turnover towards larger‐ranged plants over time and across habitats

Ingmar R. Staude, Henrique M. Pereira, Gergana N. Daskalova, Markus Bernhardt‐Römermann, Martin Diekmann, Harald Pauli, Hans Van Calster, Mark Vellend, Anne D. Bjorkman, Jörg Brunet, et al.

(2022) ECOLOGY LETTERS. 25(2). p.466-482
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Fatty acids in microalgae and cyanobacteria in a changing world : contrasting temperate and cold environments

Marcelo P. Hernando, Irene R. Schloss, Florencia de la Rosa and Marleen De Troch (UGent)

(2022) BIOCELL. 46(3). p.607-621
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Cucurbitaceae COld Peeling Extracts (CCOPEs) protect plants from root-knot nematode infections through induced resistance and nematicidal effects

Jonas De Kesel (UGent) , Eva Degroote (UGent) , Radisras Nkurunziza (UGent) , Richard Raj Singh (UGent) , Kristof Demeestere (UGent) , Karen De Kock (UGent) , Riska Anggraini, Jasper Matthys (UGent) , Eva Wambacq (UGent) , Geert Haesaert (UGent) , et al.

(2022) FRONTIERS IN PLANT SCIENCE. 12.
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A multi-omics study to boost continuous bolaform sophorolipid production

Sven Dierickx (UGent) , Karolien Maes, Sophie Roelants (UGent) , Beata Pomian (UGent) , Lieven Van Meulebroek (UGent) , Sofie De Maeseneire (UGent) , Lynn Vanhaecke (UGent) and Wim Soetaert (UGent)

(2022) NEW BIOTECHNOLOGY. 66. p.107-115
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The enzyme interactome concept in filamentous fungi linked to biomass valorization

Antonielle Vieira Monclaro (UGent) , Caio de Oliveira Gorgulho Silva, Helder Andrey Rocha Gomes, Leonora Rios de Souza Moreira and Edivaldo Ximenes Ferreira Filho

(2022) BIORESOURCE TECHNOLOGY. 344(A).
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Efficacy and safety of risankizumab for active psoriatic arthritis : 24-week results from the randomised, double-blind, phase 3 KEEPsAKE 2 trial

Andrew Ostor, Filip Van den Bosch (UGent) , Kim Papp, Cecilia Asnal, Ricardo Blanco, Jacob Aelion, Gabriela Alperovich, Wenjing Lu, Zailong Wang, Ahmed M. Soliman, et al.

(2022) ANNALS OF THE RHEUMATIC DISEASES. 81(3). p.351-358
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JASPAR 2022 : the 9th release of the open-access database of transcription factor binding profiles

Jaime A Castro-Mondragon, Rafael Riudavets-Puig, Ieva Rauluseviciute, Roza Berhanu Lemma, Laura Turchi, Romain Blanc-Mathieu, Jeremy Lucas, Paul Boddie, Aziz Khan, Nicolás Manosalva Pérez, et al.

(2022) NUCLEIC ACIDS RESEARCH. 50(D1). p.D165-D173
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TALE-induced cell death executors: an origin outside immunity?

Moritz Nowack (UGent) , Danalyn R. Holmes and Thomas Lahaye

(2022) Trends in Plant Science. 27(6). p.536-548
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TOR promotes guard cell starch degradation by regulating the activity of β-AMYLASE1 in Arabidopsis

Chao Han, Wenbo Hua, Jinge Li, Yan Qiao, Lianmei Yao, Wei Hao, Ruizhi Li, Min Fan, Geert De Jaeger (UGent) , Wenqiang Yang, et al.

(2022) PLANT CELL. 34(3). p.1038-1053
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An in situ sequencing approach maps PLASTOCHRON1 at the boundary between indeterminate and determinate cells

Reinout Laureyns (UGent) , Jessica Joossens (UGent) , Denia Herwegh (UGent) , Julie Pevernagie (UGent) , Benjamin Pavie, Kirin Demuynck (UGent) , Kevin Debray (UGent) , Griet Coussens (UGent) , Laurens Pauwels (UGent) , Tom Van Hautegem (UGent) , et al.

(2022) Plant Physiology. 188(2). p.782-794
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SAMBA controls cell division rate during maize development

Pan Gong (UGent) , Michiel Bontinck (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Kris Gevaert (UGent) , Dominique Eeckhout (UGent) , Geert Persiau (UGent) , Stijn Aesaert (UGent) , Griet Coussens (UGent) , Maria Van Lijsebettens (UGent) , et al.

(2022) PLANT PHYSIOLOGY. 188(1). p.411-424
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Single-cell transcriptomics sheds light on the identity and metabolism of developing leaf cells

Rubén Tenorio Berrio (UGent) , Kevin Verstaen (UGent) , Niels Vandamme (UGent) , Julie Pevernagie (UGent) , Ignacio Achón (UGent) , Julie Van Duyse (UGent) , Gert Van Isterdael (UGent) , Yvan Saeys (UGent) , Lieven De Veylder (UGent) , Dirk Inzé (UGent) , et al.

(2022) PLANT PHYSIOLOGY. 188(2). p.898-918
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Two phylogenetically unrelated peptide‐receptor modules jointly regulate lateral root initiation via a partially shared signaling pathway in Arabidopsis thaliana

Joris Jourquin (UGent) , Ana Fernandez Salina (UGent) , Boris Parizot (UGent) , Ke Xu (UGent) , Wim Grunewald (UGent) , Akihito Mamiya, Hidehiro Fukaki and Tom Beeckman (UGent)

(2022) NEW PHYTOLOGIST. 233(4). p.1780-1796
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Stress granule‐associated TaMBF1c confers thermotolerance through regulating specific mRNA translation in wheat ( Triticum aestivum )

Xuejun Tian, Zhen Qin, Yue Zhao, Jingjing Wen, Tianyu Lan, Liyuan Zhang, Fei Wang, Dandan Qin, Kuohai Yu, Aiju Zhao, et al.

(2022) NEW PHYTOLOGIST. 233(4). p.1731-1731
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Conditional and tissue-specific approaches to dissect essential mechanisms in plant development

Marie Pfeiffer (UGent) , Joanna Winkler (UGent) , Daniël Van Damme (UGent) , Thomas Jacobs (UGent) and Moritz Nowack (UGent)

(2022) Current Opinion in Plant Biology. 65.
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Correction : divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus

Zhilin Yuan, Irina S. Druzhinina, John G. Gibbons, Zhenhui Zhong, Yves Van de Peer (UGent) , Russell J. Rodriguez, Zhongjian Liu, Xinyu Wang, Huanshen Wei, Qi Wu, et al.

(2022) ISME JOURNAL. 16. p.321-321
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Variation of morphological traits and quality indices of micropropagated Melia volkensii Gürke clones before field planting

Constantin Dushimimana (UGent) , Titus Magomere, Jackson Mulatya, Jan Vandenabeele, Florence Olubayo, Guy Smagghe (UGent) and Stefaan Werbrouck (UGent)

(2022) FORESTS. 13(2).
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Mini-Review: Transgenerational CRISPR/Cas9 Gene Editing in Plants

Lennert Impens (UGent) , Thomas Jacobs (UGent) , Hilde Nelissen (UGent) , Dirk Inzé (UGent) and Laurens Pauwels (UGent)

(2022) Frontiers in Genome Editing. 4.
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Maximizing nutrient recycling from digestate for production of protein-rich microalgae for animal feed application

Jai Sankar Seelam (UGent) , Marcella Fernandes De Souza (UGent) , Peter Chaerle (UGent) , Bernard Willems, Evi Michels (UGent) , Wim Vyverman (UGent) and Erik Meers (UGent)

(2022) CHEMOSPHERE. 290.
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Nanopore sequencing of a forensic combined STR and SNP multiplex

Olivier Tytgat (UGent) , Sonja Skevin (UGent) , Dieter Deforce (UGent) and Filip Van Nieuwerburgh (UGent)

(2022) FORENSIC SCIENCE INTERNATIONAL-GENETICS. 56.
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Temperature is an important driver for cold acclimation in garden roses

Lin Ouyang, Leen Leus, Ellen De Keyser and Marie-Christine Van Labeke (UGent)

(2022) SCIENTIA HORTICULTURAE. 296.
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The final maturation state of β-actin involves N-terminal acetylation by NAA80, not N-terminal arginylation by ATE1

Adrian Drazic, Evy Timmerman (UGent) , Ulrike Kajan, Michaël Marie, Sylvia Varland, Francis Impens (UGent) , Kris Gevaert (UGent) and Thomas Arnesen

(2022) JOURNAL OF MOLECULAR BIOLOGY. 434(2).
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A novel panel of yeast assays for the assessment of thiamin and its biosynthetic intermediates in plant tissues

Simon Strobbe (UGent) , Jana Verstraete (UGent) , Teresa B. Fitzpatrick, Maria Faustino, Tiago F. Lourenço, M. Margarida Oliveira, Christophe Stove (UGent) and Dominique Van Der Straeten (UGent)

(2022) NEW PHYTOLOGIST.
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Shallow whole-genome sequencing : a useful, easy to apply molecular technique for CNA detection on FFPE tumor tissue : a glioma-driven study

Kim Van der Eecken (UGent) , Malaïka Van der Linden (UGent) , Lennart Raman (UGent) , David Creytens (UGent) , Franceska Dedeurwaerdere, Koen De Winne, Liesbeth Ferdinande (UGent) , Martin Lammens, Björn Menten (UGent) , Isabelle Rottiers (UGent) , et al.

(2022) VIRCHOWS ARCHIV. 480. p.677-686
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Characterization of carotenoid biosynthetic pathway genes in the pea aphid (Acyrthosiphon pisum) revealed by heterologous complementation and RNA interference assays

Bi‐Yue Ding, Xiu‐Cheng Xie, Feng Shang, Guy Smagghe (UGent) , Jin‐Zhi Niu and Jin‐Jun Wang

(2022) INSECT SCIENCE.
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Molting process revealed by the detailed expression profiles of RXR1/RXR2 and mining the associated genes in a spider mite, Panonychus citri

Gang Li, Xun‐Yan Liu, Guy Smagghe (UGent) , Jin‐Zhi Niu and Jin‐Jun Wang

(2022) INSECT SCIENCE.
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Clinical heterogeneity in MT-ATP6 pathogenic variants : same genotype—different onset

Sara Capiau (UGent) , Joél Smet (UGent) , Boel De Paepe (UGent) , Yilmaz Yildiz, Mutluay Arslan, Olivier Stevens, Maxime Verschoore (UGent) , Hedwig Stepman (UGent) , Sara Seneca and Arnaud Vanlander (UGent)

(2022) CELLS. 11(3).
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Beneficial worm allies warn plants of parasite attack below‐ground and reduce above‐ground herbivore preference and performance

Shokoofeh Kamali, Ali Javadmanesh, Lukasz L. Stelinski, Tina Kyndt (UGent) , Alireza Seifi, Monireh Cheniany, Mohammad Zaki‐Aghl, Mojtaba Hosseini, Mahyar Heydarpour, Javad Asili, et al.

(2022) MOLECULAR ECOLOGY. 31(2). p.691-712
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A synergistic combination of structural and pigmentary colour produces non-spectral colour in the purple-breasted cotinga, Cotinga cotinga (Passeriformes : Cotingidae)

Nicholas M Justyn, Asritha Nallapaneni, Andrew J Parnell, Alamgir Karim and Matthew Shawkey (UGent)

(2022) BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY. 135(1). p.62-70
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Structural color production in melanin‐based disordered colloidal nanoparticle assemblies in spherical confinement

Anvay Patil, Christian M. Heil, Bram Vanthournout (UGent) , Markus Bleuel, Saranshu Singla, Ziying Hu, Nathan C. Gianneschi, Matthew Shawkey (UGent) , Sunil K. Sinha, Arthi Jayaraman, et al.

(2022) ADVANCED OPTICAL MATERIALS. 10(5).
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Bioinspired fabrication of noniridescent structurally colored cotton fabric based on polystyrene@polycaffeic acid particles

Xiaowei Zhu, Tianchen Wei, Matthew Shawkey (UGent) , Tieling Xing and Guoqiang Chen

(2022) INDUSTRIAL CROPS AND PRODUCTS. 176.
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How melanism affects the sensitivity of lizards to climate change

Sebastian Mader, Jonathan Goldenberg (UGent) , Federico Massetti, Karen Bisschop (UGent) , Liliana D'Alba Altamirano (UGent) , Rampal S. Etienne, Susana Clusella‐Trullas and Matthew Shawkey (UGent)

(2022) FUNCTIONAL ECOLOGY. 36(4). p.812-825
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Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts

Krishna Pavani (UGent) , Tim Meese (UGent) , Osvaldo Américo Bogado Pascottini (UGent) , XueFeng Guan, Xiaoyuan Lin, Luc Peelman (UGent) , Joachim Hamacher, Filip Van Nieuwerburgh (UGent) , Dieter Deforce (UGent) , Annekatrien Boel (UGent) , et al.

(2022) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 119(12).
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Global urban environmental change drives adaptation in white clover

James S. Santangelo, Rob W. Ness, Beata Cohan, Connor R. Fitzpatrick, Simon G. Innes, Sophie Koch, Lindsay S. Miles, Samreen Munim, Pedro R. Peres-Neto, Cindy Prashad, et al.

(2022) SCIENCE. 375(6586). p.1275-1281
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The distribution and impact of an invasive plant species (Senecio inaequidens) on a dune building engineer (Calamagrostis arenaria)

Ruben Van De Walle (UGent) , François Massol, Martijn L. Vandegehuchte (UGent) and Dries Bonte (UGent)

(2022) NEOBIOTA. 72. p.1-23
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Heritability of dispersal in a rapidly spreading invasive spider

Nijat Narimanov, Dries Bonte (UGent) and Martin H. Entling

(2022) ANIMAL BEHAVIOUR. 183. p.93-101
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- Journal Article
- A1
Combination of target site mutation and associated CYPs confers high-level resistance to pyridaben in Tetranychus urticae

Yusuke Itoh, Yushi Shimotsuma, Akiya Jouraku, Wannes Dermauw (UGent) , Thomas Van Leeuwen (UGent) and Masahiro Osakabe

(2022) PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY. 181.
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- Journal Article
- A1
Pirimicarb resistance and associated mechanisms in field-collected and selected populations of Neoseiulus californicus

Tuba Albayrak, Sibel Yorulmaz, Emre Inak, Umut Toprak and Thomas Van Leeuwen (UGent)

(2022) PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY. 180.
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- Journal Article
- A1
Biochemical and molecular mechanisms of acaricide resistance in Dermanyssus gallinae populations from Turkey

Nafiye Koc, Emre Inak, Serpil Nalbantoglu, Yasin Nazim Alpkent, Wannes Dermauw (UGent) and Thomas Van Leeuwen (UGent)

(2022) PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY. 180.
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- Miscellaneous
A distant global control region is essential for normal expression of anterior HOXA genes during mouse and human craniofacial development

Andrea Wilderman, Eva D'haene (UGent) , Machteld Baetens (UGent) , Tara N. Yankee, Emma Wentworth Winchester, Nicole Glidden, Ellen Roets (UGent) , Jo Van Dorpe (UGent) , Sarah Vergult (UGent) , Timothy C. Cox, et al.

(2022) bioRxiv.
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- Journal Article
- A1
- open access
Transporter gene-mediated typing for detection and genome mining of lipopeptide-producing Pseudomonas

Lea Girard, Niels Geudens (UGent) , Brent Pauwels, Monica Höfte (UGent) , José Martins (UGent) and Rene De Mot

(2022) APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 88(2).
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- Journal Article
- A1
- open access
The effect of topical anesthetics on 16S ribosomal ribonucleic acid amplicon sequencing results in ocular surface microbiome research

Heleen Delbeke, Ingele Casteels and Marie Joossens (UGent)

(2022) TRANSLATIONAL VISION SCIENCE & TECHNOLOGY. 11(3).
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- Journal Article
- A1
- open access
Concerning the paper “Ocular Surface Microbiome in Health and Disease”

Heleen Delbeke, Ingele Casteels and Marie Joossens (UGent)

(2022) ASIA-PACIFIC JOURNAL OF OPHTHALMOLOGY. 11(1). p.89-90
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- Journal Article
- open access
Bacterial biofilms on thalli of Laboulbeniales: a community uncovered

Maarten Lubbers, Gerda E.M. Lamers, André De Kesel, Oldřich Nedvěd, Menno Schilthuizen and Danny Haelewaters (UGent)

(2022) Sydowia. 74. p.335-342
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- open access
Double infections of the invasive ladybird Harmonia axyridis

Michiel De Groot (UGent) and Danny Haelewaters (UGent)

(2022) Frontiers in Ecology and Evolution. 10.
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- Journal Article
- open access
The haustorium as a driving force for speciation in thallus-forming Laboulbeniomycetes

Danny Haelewaters (UGent) , Maarten Lubbers and André De Kesel

(2022) IMA Fungus. 13.
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- Journal Article
- open access
Focus on Hyperparasites: Biotic and Abiotic Traits Affecting the Prevalence of Parasitic Microfungi on Bat Ectoparasites

Áron Péter, Andrei Daniel Mihalca, Danny Haelewaters (UGent) and Attila D. Sándor

(2022) Frontiers in Ecology and Evolution. 10.
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- Book Chapter
Protoplast preparation and fluorescence-activated cell for the evaluation of targeted mutagenesis in plant cells

Ward Decaestecker (UGent) , Norbert Bollier (UGent) , Rafael Andrade Buono (UGent) , Moritz Nowack (UGent) and Thomas Jacobs (UGent)

(2022) Protoplast technology. In Methods in Molecular Biology 2464. p.205-221
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- PhD Thesis
Enrichment of a purine nucleoside analog library towards activity against Leishmania and Trypanosoma cruzi species

Cai Lin (UGent)

(2022)
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- Journal Article
- A1
A novel chicory fructanase can degrade common microbial fructan product profiles and displays positive cooperativity

Maxime Versluys, Jaime Ricardo Porras-Domínguez, Tibo De Coninck (UGent) , Els Van Damme (UGent) and Wim Van den Ende

(2022) JOURNAL OF EXPERIMENTAL BOTANY. 73(5). p.1602-1622
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- Journal Article
- A1
35 years in plant lectin research : a journey from basic science to applications in agriculture and medicine

Els Van Damme (UGent)

(2022) GLYCOCONJUGATE JOURNAL.
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- open access
Root system size and root hair length are key phenes for nitrate acquisition and biomass production across natural variation in Arabidopsis

Jérôme De Pessemier, Taraka R Moturu, Philippe Nacry, Rebecca Ebert, dr. Hugues De Gernier (UGent) , Pascal Tillard, Kamal Swarup, Darren M Wells, Jim Haseloff, Seth C Murray, et al.

(2022) Journal of Experimental Botany. 73(11). p.3569-3583
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- Conference Paper
- C3
- open access
Discovery and structure elucidation of novel alkaloids from marine actinobacteria

Jeltien Rombaut (UGent) , Anne-Sofie De Rop, Thomas Willems (UGent) , Marilyn De Graeve (UGent) , Lynn Vanhaecke (UGent) , Paco Hulpiau, Sofie De Maeseneire (UGent) , Maarten De Mol (UGent) and Wim Soetaert (UGent)

(2022) Annual Symposium of the Belgian Society for Microbiology, Abstracts.
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- Journal Article
- A1
- open access
Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling

Qing Lu (UGent) , Yonghong Zhang (UGent) , Joakim Hellner, Caterina Giannini, Xiangyu Xu (UGent) , Jarne Pauwels (UGent) , Qian Ma (UGent) , Wim Dejonghe (UGent) , Huibin Han, Brigitte Van De Cotte (UGent) , et al.

(2022) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 119(11).
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- Miscellaneous
Editorial Feature: Meet the PCP Editor—Eugenia (Jenny) Russinova

Eugenia Russinova (UGent)

(2022) Plant and Cell Physiology.
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- A1
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Tree species diversity and forest edge density jointly shape the gut microbiota composition in juvenile great tits (Parus major)

Evy Goossens (UGent) , Roschong Boonyarittichaikij (UGent) , Daan Dekeukeleire (UGent) , Lionel Hertzog (UGent) , Sarah Van Praet (UGent) , Frank Pasmans (UGent) , Dries Bonte (UGent) , Kris Verheyen (UGent) , Luc Lens (UGent) , An Martel (UGent) , et al.

(2022) FRONTIERS IN MICROBIOLOGY. 13.
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- A1
QTL mapping suggests that both cytochrome P450-mediated detoxification and target-site resistance are involved in fenbutatin oxide resistance in Tetranychus urticae

Berdien De Beer (UGent) , Ernesto Villacis Perez (UGent) , Mousaalreza Khaglighi (UGent) , Corinna Saalwaechter, Marilou Vandenhole (UGent) , Wim Jonckheere (UGent) , Ibrahim Ismaeil (UGent) , Sven Geibel, Thomas Van Leeuwen (UGent) and Wannes Dermauw (UGent)

(2022) INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY.
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- Miscellaneous
- open access
Transcriptional and functional consequences of alterations to MEF2C and its topological organization in neuronal models

Kiana Mohajeri, Rachita Yadav, Eva D'haene (UGent) , Philip M. Boone, Serkan Erdin, Dadi Gao, Mariana Moyses-Oliveira, Riya Bhavsar, Benjamin Currall, Kathryn O’Keefe, et al.

(2022) BIORXIV.
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- PhD Thesis
Host susceptibility of amphibians to chytridiomycosis : lessons for mitigation

Zhimin Li (UGent)

(2022)
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- Journal Article
- A1
- open access
Uncovering new insights and misconceptions on the effectiveness of phosphate solubilizing rhizobacteria in plants : a meta-analysis

Noémie De Zutter (UGent) , Maarten Ameye (UGent) , Boris Bekaert (UGent) , Jan Verwaeren (UGent) , Leen De Gelder (UGent) and Kris Audenaert (UGent)

(2022) FRONTIERS IN PLANT SCIENCE. 13.
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- Journal Article
- A1
Transient nuclear lamin A/C accretion aids in recovery from vapor nanobubble-induced permeabilisation of the plasma membrane

Gaëlle Houthaeve (UGent) , Gerardo García-Díaz Barriga, Stephan Stremersch (UGent) , Herlinde De Keersmaecker (UGent) , Juan Fraire (UGent) , Jo Vandesompele (UGent) , Pieter Mestdagh (UGent) , Stefaan De Smedt (UGent) , Kevin Braeckmans (UGent) and Winnok De Vos (UGent)

(2022) CELLULAR AND MOLECULAR LIFE SCIENCES. 79(1).
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Global maps of soil temperature

Jonas J. Lembrechts, Johan Hoogen, Juha Aalto, Michael B. Ashcroft, Pieter De Frenne (UGent) , Julia Kemppinen, Martin Kopecký, Miska Luoto, Ilya M. D. Maclean, Thomas W. Crowther, et al.

(2022) GLOBAL CHANGE BIOLOGY. 28(9). p.3110-3144
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- PhD Thesis
Identification and characterization of substrates of the Anaphase Promoting Complex/Cyclosome in Arabidopsis thaliana

Alex Willems (UGent)

(2022)

Indole decreases the virulence of pathogenic vibrios belonging to the Harveyi clade

Distinct dynamics of Vibrio parahaemolyticus populations in two farming models

Phosphorus puts a mortgage on restoration of species-rich grasslands on former agricultural land

Binding of Orysata lectin induces an immune response in insect cells

Influence of bioprocess parameters on sophorolipid production from bakery waste oil

Means to quantify vascular cell file numbers in different tissues

From bumblebee to bioeconomy : recent developments and perspectives for sophorolipid biosynthesis

Radiation-induced cardiovascular disease : an overlooked role for DNA methylation?

Muscle fibre typology as a novel risk factor for hamstring strain injuries in professional football (soccer) : a prospective cohort study

Prospective BMI changes in preschool children are associated with parental characteristics and body weight perceptions : the ToyBox-study

Triplex digital PCR assays for the quantification of intact proviral HIV-1 DNA

Undifferentiated sarcoma of bone with a round to epithelioid cell phenotype harboring a novel EWSR1-SSX2 fusion identified by RNA-based next-generation sequencing

Ksrates : positioning whole-genome duplications relative to speciation events in KS distributions

Improving oxidative stress resilience in plants

A calmodulin antagonist protects in vitro raspberries against disturbed photosynthesis caused by constant light and cytokinin

What can biofabrication do for space and what can space do for biofabrication?

Simulating tree growth response to climate change in structurally-diverse oak and beech forests

Molecular mechanisms of endomembrane trafficking in plants

Advancing root developmental research through single-cell technologies

Tubular bioartificial organs : from physiological requirements to fabrication processes and resulting properties : a critical review

Selective copper recovery from ammoniacal waste streams using a systematic biosorption process

RNAi of the N-glycosylation-related genes confirms their importance in insect development and alpha-1,6-fucosyltransferase plays a role in the ecdysis event for the hemimetabolous pest insect Nilaparvata lugens

GNBP1 as a potential RNAi target to enhance the virulence of Beauveria bassiana for aphid control

Novel antibody cocktail targeting Bet v 1 rapidly and sustainably treats birch allergy symptoms in a Phase 1 study

Epithelial-mesenchymal transition (EMT) as a therapeutic target

Comment on : 'Penetration of antibacterial agents into pulmonary epithelial lining fluid : an update'

Production of solid hydrochar from waste seaweed by hydrothermal carbonization : effect of process variables

Increasing wild bee richness and abundance on sequentially flowering cultivars of a pollinator-dependent crop

Discovery of a widespread presence bunyavirus that may have symbiont-like relationships with different species of aphids

Editorial : plant-pest interactions volume I : Acari and thrips

Oviposition preference and two-sex life table of Plutella xylostella and its association with defensive enzymes in three Brassicaceae crops

Translocation of tebuconazole between bee matrices and its potential threat on honey bee (Apis mellifera Linnaeus) queens

Dominance of honey bees is negatively associated with wild bee diversity in commercial apple orchards regardless of management practices

Increased compositional heterogeneity of mass-flowering orchard crops does not promote wild bee abundance in orchards

The cross-bacterial expression system : development of parts and tools for standardized gene engineering across the bacterial domain

Systemic mastocytosis with myeloid sarcoma and B-CLL : molecular and clonal heterogeneity in a rare case of SM-AHN with review of literature

Cold case : the disappearance of Egypt bee virus, a fourth distinct master strain of deformed wing virus linked to honeybee mortality in 1970's Egypt

Molecular and genetic dissection of macrocyclic lactone resistance in the spider mite Tetranychus urticae

Beekeepers perception of risks affecting colony loss : a pilot survey

Expanding dendritic cell nomenclature in the single-cell era

Coordinate control of basal epithelial cell fate and stem cell maintenance by core EMT transcription factor Zeb1

Selectivity and molecular stress responses to classical and botanical acaricides in the predatory mite Phytoseiulus persimilis Athias-Henriot (Acari: Phytoseiidae)

Deubiquitinating enzymes UBP12 and UBP13 stabilize the brassinosteroid receptor BRI1

Embryo–Endosperm Interactions

Impact of heavy metal exposure on biological control of a deadly amphibian pathogen by zooplankton

Data mining and modelling to understand cell migration heterogeneity and plasticity

Translational profile of developing phellem cells in Arabidopsis thaliana roots

Stenotrophomonas sp. SRS1 promotes growth of Arabidopsis and tomato plants under salt stress conditions

Approaches and determinants to sustainably improve crop production

Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy

The N-glycosylation-related genes as potential targets for RNAi-mediated pest control of the Colorado potato beetle (Leptinotarsa decemlineata)

Implementation of RNAi-based arthropod pest control : environmental risks, potential for resistance and regulatory considerations

Developmental O-glycan profile analysis shows pentasaccharide mucin-type O-glycans are linked with pupation of Tribolium castaneum

(Multi)functionality in grasslands undergoing restoration management towards Nardus grasslands

Engineering a lysin with intrinsic antibacterial activity (LysMK34) by cecropin a fusion enhances its antibacterial properties against acinetobacter baumannii

Malignant pleural mesothelioma with an EML4-ALK fusion : expect the unexpected!

Persuasion is better then force : how Caulobacter RHG1 convinces Arabidopsis thaliana of its beneficial character

Repression of TMO5/LHW-mediated vascular proliferation in Arabidopsis thaliana

Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen

The Phloem Intercalated With Xylem-Correlated 3 Receptor-Like Kinase Constitutively Interacts With Brassinosteroid Insensitive 1-Associated Receptor Kinase 1 and Is Involved in Vascular Development in Arabidopsis

Within and beyond organelle engineering: strategies for increased terpene production in yeasts and plants

Stress-induced inflammation evoked by immunogenic cell death is blunted by the IRE1 alpha kinase inhibitor KIRA6 through HSP60 targeting

Identifying drivers of microbial dynamics in aquaculture : from single-cell technology to metagenomics

Bacterially enhanced plant growing media for controlled environment agriculture

Orthogonal proteomics methods to unravel the HOTAIR interactome

Pre-existing antibodies directed against a tetramerizing domain enhance the immune response against artificially stabilized soluble tetrameric influenza neuraminidase

Spicoid morphology of Mapanioideae (Cyperaceae): an evolutionary perspective

A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics

A comprehensive evaluation of consensus spectrum generation methods in proteomics

Bioprospecting and taxonomy of isolates of the class Actinobacteria and the genus Bacillus from aquatic ecosystems of Santiago de Cuba

Diversity of nematodes on banana (Musa spp.) in Kenya linked to altitude and with a focus on the pathogenicity of Pratylenchus goodeyi

Time-based binding as a solution to and a limitation for flexible cognition

Proteomics as a tool to gain next level insights into photo-crosslinkable biopolymer modifications

Homeophasic adaptation in response to UVA radiation in Pseudomonas aeruginosa : changes of membrane fatty acid composition and induction of desA and desB expression

Unraveling the molecular framework of de novo shoot organogenesis in Arabidopsis thaliana

On the pivotal role of water potential to model plant physiological processes

Uranium resistance mechanisms in Cupriavidus metallidurans : from environmental relevance to potential applications

Exploring the structure-function relationship of C2-epimerases

Recent advancements in tracking bacterial effector protein translocation

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq