Ghent University Academic Bibliography

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Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis

Markéta Luklová, Marieke Dubois (UGent) , Michaela Kameniarová, Klára Plačková, Jan Novák, Romana Kopecká, Michal Karady, Jaroslav Pavlů, Jan Skalák, Sunita Jindal, et al.

(2025) PLANT CELL AND ENVIRONMENT. 48(7). p.5030-5052
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Challenges of translating Arabidopsis insights into crops

Cristóbal Uauy, Hilde Nelissen (UGent) , Raquel Lía Chan, Johnathan A. Napier, David Seung, Linsan Liu and Sarah M. McKim

(2025) PLANT CELL. 37(5).
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Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1

Hong Wei, Heyuan Zhu (UGent) , Wei Ying, Hilde Janssens (UGent) , Miroslav Kvasnica, Johan M. Winne, Yongxiang Gao, Jiří Friml, Qian Ma (UGent) , Shutang Tan, et al.

(2025) PLANT COMMUNICATIONS. 6(1).
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Reduced RG-II pectin dimerization disrupts differential growth by attenuating hormonal regulation

Pawan Kumar Jewaria, Bibek Aryal, Rifat Ara Begum, Yaowei Wang, Gloria Sancho-Andrés, Abu Imran Baba, Meng Yu, Xiaojuan Li, Jinxing Lin, Stephen C. Fry, et al.

(2025) SCIENCE ADVANCES. 11(7).
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Cycles of satellite and transposon evolution in Arabidopsis centromeres

Piotr Wlodzimierz, Fernando A. Rabanal, Robin Burns, Matthew Naish, Elias Primetis, Alison Scott, Terezie Mandákova, Nicola Gorringe, Andrew J. Tock, Daniel Holland, et al.

(2023) NATURE. 618(7965). p.557-565
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Single-cell transcriptomics sheds light on the identity and metabolism of developing leaf cells

Rubén Tenorio Berrio (UGent) , Kevin Verstaen (UGent) , Niels Vandamme (UGent) , Julie Pevernagie (UGent) , Ignacio Achón, Julie Van Duyse (UGent) , Gert Van Isterdael (UGent) , Yvan Saeys (UGent) , Lieven De Veylder (UGent) , Dirk Inzé (UGent) , et al.

(2022) PLANT PHYSIOLOGY. 188(2). p.898-918
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Genetic disruption of Arabidopsis secondary metabolite synthesis leads to microbiome-mediated modulation of nematode invasion

Md. Maniruzzaman Sikder, Mette Vestergård, Tina Kyndt (UGent) , Olivera Topalović, Enoch Narh Kudjordjie and Mogens Nicolaisen

(2022) ISME JOURNAL. 16(9). p.2230-2241
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Distinct cellular strategies determine sensitivity to mild drought of Arabidopsis natural accessions

Ying Chen (UGent) , Marieke Dubois (UGent) , Mattias Vermeersch (UGent) , Dirk Inzé (UGent) and Hannes Vanhaeren (UGent)

(2021) PLANT PHYSIOLOGY. 186(2). p.1171-1185
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GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways

Alaeddine Safi (UGent) , Anna Medici, Wojciech Szponarski, Florence Martin, Anne Clément-Vidal, Amy Marshall-Colon, Sandrine Ruffel, Frédéric Gaymard, Hatem Rouached, Julie Leclercq, et al.

(2021) JOURNAL OF EXPERIMENTAL BOTANY. 72(10). p.3881-3901
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Multi‐omics network‐based functional annotation of unknown Arabidopsis genes

Thomas Depuydt and Klaas Vandepoele (UGent)

(2021) PLANT JOURNAL. 108. p.1193-1212
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The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators

Natalia Nikonorova (UGent) , Evan Murphy, Cássio Flávio Fonseca de Lima, Shanshuo Zhu, Brigitte Van De Cotte (UGent) , Lam Dai Vu (UGent) , Daria Balcerowicz, Lanxin Li, Xiangpei Kong, Gieljan De Rop, et al.

(2021) CELLS. 10(7).
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Arabidopsis lectin EULS3 is involved in ABA signaling in roots

Malgorzata Dubiel, Tom Beeckman (UGent) , Guy Smagghe (UGent) and Els Van Damme (UGent)

(2020) FRONTIERS IN PLANT SCIENCE. 11.
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Mutation of arabidopsis copper-containing amine oxidase gene AtCuAOδ alters polyamines, reduces gibberellin content and affects development

Basmah Alharbi, Julie D. Hunt, Simone Dimitrova, Natasha D. Spadafora, Alex P. Cort, Davide Colombo, Carsten T. Müller, Sandip Annasaheb Ghuge (UGent) , Daniela Davoli, Alessandra Cona, et al.

(2020) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 21(20).
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The role of HEXOKINASE1 in Arabidopsis leaf growth

Judith Van Dingenen (UGent) , Mattias Vermeersch (UGent) , Liesbeth De Milde (UGent) , Sander Hulsmans, Nancy De Winne (UGent) , Jelle Van Leene (UGent) , Nathalie Gonzalez Sanchez (UGent) , Stijn Dhondt (UGent) , Geert De Jaeger (UGent) , Filip Rolland, et al.

(2019) PLANT MOLECULAR BIOLOGY. 99(1-2). p.79-93
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Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites

Jingjing Huang (UGent) , Patrick Willems (UGent) , Bo Wei, Caiping Tian, Renan B Ferreira, Nandita Bodra (UGent) , Santiago Agustín Martínez Gache, Khadija Wahni, Keke Liu, Didier Vertommen, et al.

(2019) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 116(42). p.21256-21261
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CRISPR-TSKO : a technique for efficient mutagenesis in specific cell types, tissues, or organs in Arabidopsis

Ward Decaestecker, Rafael Andrade Buono (UGent) , Marie Pfeiffer, Nick Vangheluwe (UGent) , Joris Jourquin (UGent) , Mansour Karimi (UGent) , Gert Van Isterdael (UGent) , Tom Beeckman (UGent) , Moritz Nowack (UGent) and Thomas B. Jacobs (UGent)

(2019) PLANT CELL. 31(12). p.2868-2887
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Mutant-based model of two independent pathways for carotenoid-mediated chloroplast biogenesis in Arabidopsis embryos

Eva Vranová, Diana Kopcsayová, Ján Košuth and Maite Colinas Martinez (UGent)

(2019) FRONTIERS IN PLANT SCIENCE. 10.
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A spatiotemporal DNA endoploidy map of the Arabidopsis root reveals roles for the endocycle in root development and stress adaptation

Rahul Bhosale (UGent) , Véronique Boudolf (UGent) , Fabiola Cuevas Bustamante, Ran Lu, Thomas Eekhout (UGent) , Zhubing Hu (UGent) , Gert Van Isterdael (UGent) , Georgina M Lambert, Fan Xu, Moritz Nowack (UGent) , et al.

(2018) PLANT CELL. 30(10). p.2330-2351
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NAC transcription factors ANAC087 and ANAC046 control distinct aspects of programmed cell death in the Arabidopsis columella and lateral root cap

Marlies Huysmans (UGent) , Rafael Andrade Buono (UGent) , Noemi Skorzinski, Marta Cubría Radío, Freya De Winter (UGent) , Boris Parizot (UGent) , Jan Mertens, Mansour Karimi (UGent) , Matyas Fendrych (UGent) and Moritz Nowack (UGent)

(2018) PLANT CELL. 30(9). p.2197-2213
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Self-protection of cytosolic malate dehydrogenase against oxidative stress in Arabidopsis

Jingjing Huang (UGent) , Adnan Khan Niazi, David Young, Leonardo Astolfi Rosado, Didier Vertommen, Nandita Bodra (UGent) , Mohamed Ragab Abdelgawwad, Florence Vignols, Bo Wei, Khadija Wahni, et al.

(2018) JOURNAL OF EXPERIMENTAL BOTANY. 69(14). p.3491-3505

Academic Bibliography

Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis

Challenges of translating Arabidopsis insights into crops

Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1

Reduced RG-II pectin dimerization disrupts differential growth by attenuating hormonal regulation

Cycles of satellite and transposon evolution in Arabidopsis centromeres

Single-cell transcriptomics sheds light on the identity and metabolism of developing leaf cells

Genetic disruption of Arabidopsis secondary metabolite synthesis leads to microbiome-mediated modulation of nematode invasion

Distinct cellular strategies determine sensitivity to mild drought of Arabidopsis natural accessions

GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways

Multi‐omics network‐based functional annotation of unknown Arabidopsis genes

The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators

Arabidopsis lectin EULS3 is involved in ABA signaling in roots

Mutation of arabidopsis copper-containing amine oxidase gene AtCuAOδ alters polyamines, reduces gibberellin content and affects development

The role of HEXOKINASE1 in Arabidopsis leaf growth

Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites

CRISPR-TSKO : a technique for efficient mutagenesis in specific cell types, tissues, or organs in Arabidopsis

Mutant-based model of two independent pathways for carotenoid-mediated chloroplast biogenesis in Arabidopsis embryos

A spatiotemporal DNA endoploidy map of the Arabidopsis root reveals roles for the endocycle in root development and stress adaptation

NAC transcription factors ANAC087 and ANAC046 control distinct aspects of programmed cell death in the Arabidopsis columella and lateral root cap

Self-protection of cytosolic malate dehydrogenase against oxidative stress in Arabidopsis

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