Ghent University Academic Bibliography

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HLA-DP on epithelial cells enables tissue damage by NKp44+ natural killer cells in ulcerative colitis

Martin E. Baumdick, Annika Niehrs, Frauke Degenhardt, Maria Schwerk, Ole Hinrichs, Ana Jordan-Paiz, Benedetta Padoan, Lucy H.M. Wegner, Sebastian Schloer, Britta F. Zecher, et al.

(2023) GASTROENTEROLOGY. 165(4). p.946-962.e13
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Initial presenting manifestations in 16,486 patients with inborn errors of immunity include infections and noninfectious manifestations

Julian Thalhammer, Gerhard Kindle, Alexandra Nieters, Stephan Rusch, Mikko R.J. Seppänen, Alain Fische, Bodo Grimbacher, David Edgar, Matthew Buckland, Nizar Mahlaoui, et al.

(2021) JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 148(5). p.1332-1341.e5
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Pan-cancer analysis of whole genomes

Peter J. Campbell, Gad Getz, Jan O. Korbel, Joshua M. Stuart, Jennifer L. Jennings, Lincoln D. Stein, Marc D. Perry, Hardeep K. Nahal-Bose, B. F. Francis Ouellette, Constance H. Li, et al.

(2020) NATURE. 578(7793). p.82-93
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Prdx4 limits caspase-1 activation and restricts inflammasome-mediated signaling by extracellular vesicles

Simone Lipinski, Steffen Pfeuffer, Philipp Arnold, Christian Treitz, Konrad Aden, Henriette Ebsen, Maren Falk-Paulsen, Nicolas Gisch, Antonella Fazio, Jan Kuiper, et al.

(2019) EMBO JOURNAL. 38(20).
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IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes

Yukihide Momozawa, Julia Dmitrieva, Emilie Theatre, Valerie Deffontaine, Souad Rahmouni, Benoit Charloteaux, Francois Crins, Elisa Docampo, Mahmoud Elansary, Ann-Stephan Gori, et al.

(2018) NATURE COMMUNICATIONS. 9.
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Analysis of shared heritability in common disorders of the brain

Verneri Anttila, Brendan Bulik-Sullivan, Hilary K Finucane, Raymond K Walters, Jose Bras, Laramie Duncan, Valentina Escott-Price, Guido J Falcone, Padhraig Gormley, Rainer Malik, et al.

(2018) SCIENCE. 360(6395).
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Sirolimus use in liver transplant recipients with hepatocellular carcinoma: a randomized, multicenter, open-label phase 3 trial

Edward K Geissler, Andreas A Schnitzbauer, Carl Zülke, Philipp E Lamby, Andrea Proneth, Christophe Duvoux, Patrizia Burra, Karl-Walter Jauch, Markus Rentsch, Tom M Ganten, et al.

(2016) TRANSPLANTATION. 100(1). p.116-125
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Deep resequencing of GWAS loci identifies rare variants in CARD9, IL23R and RNF186 that are associated with ulcerative colitis

Mélissa Beaudoin, Philippe Goyette, Gabrielle Boucher, Ken Sin Lo, Manuel A. Rivas, Christine Stevens, Azadeh Alikashani, Martin Ladouceur, David Ellinghaus, Leif Törkvist, et al.

(2013) PLOS GENETICS. 9(9).
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Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis

Jimmy Z Liu, Johannes Roksund Hov, Trine Folseraas, Eva Ellinghaus, Simon M Rushbrook, Nadezhda T Doncheva, Ole A Andreassen, Rinse K Weersma, Tobias J Weismüller, Bertus Eksteen, et al.

(2013) NATURE GENETICS. 45(6). p.670-675
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Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

Luke Jostins, Stephan Ripke, Rinse K Weersma, Richard H Duerr, Dermot P McGovern, Ken Y Hui, James C Lee, L Philip Schumm, Yashoda Sharma, Carl A Anderson, et al.

(2012) NATURE. 491(7422). p.119-124
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Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47

Carl A Anderson, Gabrielle Goucher, Charlie W Lees, Andre Franke, Mauro D'Amato, Kent D Taylor, James C Lee, Philippe Goyette, Marcin Imielinski, Anna Latiano, et al.

(2011) NATURE GENETICS. 43(3). p.246-252
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Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma

Johannes H Schulte, Tobias Marschall, Marcel Martin, Philipp Rosenstiel, Pieter Mestdagh (UGent) , Stefanie Schlierf, Theresa Thor, Jo Vandesompele (UGent) , Angelika Eggert, Stefan Schreiber, et al.

(2010) NUCLEIC ACIDS RESEARCH. 38(17). p.5919-5928
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- Conference Paper
- C3
Deep sequencing reveals differential expression of microRNAs in favourable versus unfavourable neuroblastoma

Johannes Schulte, Tobias Marshall, Marcel Martin, Philipp Rosenstiel, Pieter Mestdagh (UGent) , Stefanie Schlierf, Theresa Thor, Jo Vandesompele (UGent) , Angelika Eggert, Stefan Schreiber, et al.

(2010) PEDIATRIC BLOOD & CANCER. 55(5). p.826-827
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Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

Andre Franke, Dermot PB McGovern, Jeffrey C Barrett, Kai Wang, Graham L Radford-Smith, Tariq Ahmad, Charlie W Lees, Tobias Balschun, James Lee, Rebecca Roberts, et al.

(2010) NATURE GENETICS. 42(12). p.1118-1125
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- Journal Article
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Genetic risk profiling and prediction of disease course in Crohn's disease patients

Liesbet Henckaerts, Kristel Van Steen (UGent) , Isabel Verstreken, Isabelle Cleynen, Andre Franke, Stefan Schreiber, Paul Rutgeerts and Severine Vermeire

(2009) CLINICAL GASTROENTEROLOGY AND HEPATOLOGY. 7(9). p.972-980

Academic Bibliography

HLA-DP on epithelial cells enables tissue damage by NKp44+ natural killer cells in ulcerative colitis

Initial presenting manifestations in 16,486 patients with inborn errors of immunity include infections and noninfectious manifestations

Pan-cancer analysis of whole genomes

Prdx4 limits caspase-1 activation and restricts inflammasome-mediated signaling by extracellular vesicles

IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes

Analysis of shared heritability in common disorders of the brain

Sirolimus use in liver transplant recipients with hepatocellular carcinoma: a randomized, multicenter, open-label phase 3 trial

Deep resequencing of GWAS loci identifies rare variants in CARD9, IL23R and RNF186 that are associated with ulcerative colitis

Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47

Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma

Deep sequencing reveals differential expression of microRNAs in favourable versus unfavourable neuroblastoma

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

Genetic risk profiling and prediction of disease course in Crohn's disease patients

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