Ghent University Academic Bibliography

Journal Article
A1
open access

Infectious diarrhea after allogeneic hematopoietic cell transplantation assessed by a multiplex polymerase chain reaction assay

Jens Van Praet (UGent) , Andreas Huysman (UGent) , Eline De Knijf, Stefanie De Buyser (UGent) , Sylvia Snauwaert, Jan Van Droogenbroeck (UGent) , Tom Lodewyck, Alexander Schauwvlieghe (UGent) , Dominik Selleslag and Marijke Reynders

(2023) INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES. 127. p.17-22

Infectious diarrhea after allogeneic hematopoietic cell transplantation assessed by a multiplex polymerase chain reaction assay

Towards overcoming genetic redundancy and lethality : design and implementation of novel CRISPR tools in plant programmed cell death research

A microbial world of difference : from unravelling individualising gut microbial characteristics to its applications in novel in vitro research

Impact of SARS-CoV-2 vaccination and monoclonal antibodies on outcome post CD19-CAR-T : an EPICOVIDEHA survey

Impact of EMT on regulated cell death and immune activation in colorectal cancer

Linking marine nematode competition dynamics with microbial diversity to understand ecosystem functioning

Linkages between mangroves and fisheries in the Galapagos : ecological, social and management perspectives

Reduced levels of misfolded and aggregated mutant p53 by proteostatic activation

Machine learning on large-scale proteomics data identifies tissue and cell-type specific proteins

A Solve-RD ClinVar-based reanalysis of 1522 index cases from ERN-ITHACA reveals common pitfalls and misinterpretations in exome sequencing

Single-cell profiling identifies a novel human polyclonal unconventional T cell lineage

Dendritic cell­-biased precursors support early human thymopoiesis

Reflective multi-immersion microscope objectives inspired by the Schmidt telescope

HNF1B alters an evolutionarily conserved nephrogenic program of target genes

Molecular mechanisms of nemorosone-induced ferroptosis in cancer cells

Caspase inhibition modulates monocyte-derived macrophage polarization in damaged tissues

Differential transport of a guild of mutualistic root aphids by the ant Lasius flavus

Hepatic glutamine synthetase controls N-5-methylglutamine in homeostasis and cancer

Can a simple selection program predict winter mortality? Preliminary evaluation of the Flemish honey bee breeding program steers towards selection by exclusion

Scapular morphology of great apes and humans : a three-dimensional computed tomography-based comparative study

ProteomicsML : an online platform for community-curated data sets and tutorials for machine learning in proteomics

How far are we from eDNA-based biomonitoring of fish? A look at the spatial reach of eDNA in lotic waters

Cost-effective sequence analysis of 113 genes in 1,192 probands with retinitis pigmentosa and Leber congenital amaurosis

A Complement Atlas identifies interleukin 6 dependent alternative pathway dysregulation as a key druggable feature of COVID-19

Improving surgical treatment of breast cancer : dual-modality nanocrystals for the detection of sentinel lymph nodes

Inference of ancient polyploidy from genomic data

Polyploidy : methods and protocols

Memory of stochastic single-cell apoptotic signaling promotes chemoresistance in neuroblastoma

Blocking abundant RNA transcripts by high-affinity oligonucleotides during transcriptome library preparation

C-terminal frameshift variant of TDP-43 with pronounced aggregation-propensity causes rimmed vacuole myopathy but not ALS/FTD

Tau promotes oxidative stress-associated cycling neurons in S phase as a pro-survival mechanism : possible implication for Alzheimer's disease

A galactoside-specific Dalbergieae legume lectin from seeds of Vataireopsis araroba (Aguiar) Ducke

Proteomics standards initiative at twenty years : current activities and future work

Strategies for enhanced shoot regeneration through targeted intervention in cytokinin homeostasis

Optimization of anaerobic membrane bioreactors for sludge treatment

Pseudomonas syringae DC3000 infection increases glucosylated N-glycans in Arabidopsis thaliana

Deciphering the molecular mechanism of Papaver self-incompatibility-triggered programmed cell death in Arabidopsis

The non-JAZ TIFY protein TIFY8 of Arabidopsis thaliana interacts with the HD-ZIP III transcription factor REVOLUTA and regulates leaf senescence

Clustered regularly interspaced short palindromic repeats tools for plant metabolic engineering : achievements and perspectives

Vitamin D deficiency : an underestimated factor in sepsis?

Safety and immunogenicity of a respiratory syncytial virus prefusion F (RSVPreF3) candidate vaccine in older adults : phase 1/2 randomized clinical trial

Charting the lipopeptidome of nonpathogenic Pseudomonas

Diproline-induced resistance to parasitic nematodes in the same and subsequent rice generations : roles of iron, nitric oxide and ethylene

Genetic variants in ARHGEF6 cause congenital anomalies of the kidneys and urinary tract in humans, mice, and frogs

RNA extraction method impacts quality metrics and sequencing results in formalin-fixed, paraffin-embedded tissue samples

No effect of acute balenine supplementation on maximal and submaximal exercise performance in recreational cyclists

Cells responding to closely related cholesterol-dependent cytolysins release extracellular vesicles with a common proteomic content including membrane repair proteins

Small heat shock proteins operate as molecular chaperones in the mitochondrial intermembrane space

From prediction to function : current practices and challenges towards the functional characterization of type III effectors

High throughput determination of the biofilm prevention concentration for Pseudomonas aeruginosa biofilms using a synthetic cystic fibrosis sputum medium

Adaptation of Pseudomonas aeruginosa biofilms to tobramycin and the quorum sensing inhibitor C-30 during experimental evolution requires multiple genotypic and phenotypic changes

Protein interactors of 3-O sulfated heparan sulfates in human MCI and age-matched control cerebrospinal fluid

Integrated gut metabolome and microbiome fingerprinting reveals that dysbiosis precedes allergic inflammation in IgE-mediated pediatric cow’s milk allergy

Novel opto-fluidic drug delivery system for efficient cellular transfection

Valorisation of crustacean and bivalve processing side streams for industrial fast time-to-market products : a review from the European Union regulation perspective

The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids

Inference of ancient polyploidy using transcriptome data

Glycyrrhizin-based hydrogels accelerate wound healing of normoglycemic and diabetic mouse skin

IL-5-producing CD4+ T cells and eosinophils cooperate to enhance response to immune checkpoint blockade in breast cancer

Integrated assessment of environmental quality and consumers' health risks and benefits of red mangrove crabs from the Guayas estuary, Ecuador

Genetic approaches to improve lignocellulosic biomass yield and processing efficiency in Arabidopsis and poplar

The CIPK23 protein kinase represses SLAC1‐type anion channels in Arabidopsis guard cells and stimulates stomatal opening

Adeno-associated virus serotype 2 capsid variants for improved liver-directed gene therapy

The anatomy of the head muscles in caecilians (Amphibia: Gymnophiona) : variation in relation to phylogeny and ecology?

Plant-associated Bacillus mobilizes its secondary metabolites upon perception of the siderophore pyochelin produced by a Pseudomonas competitor

Role of preconditioning with oxygen and glucose deprivation in promoting differentiation of dental pulp stem cells in 3D culture

Deciphering pathways of fatty acid efflux in Starmerella bombicola and Yarrowia lipolytica and their potential for microbial cell factories

Urinary extracellular vesicles in chronic kidney disease : from bench to bedside?

Biomarkers for biosensors to monitor space-induced cardiovascular ageing

Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium

Long-term N-addition alters the community structure of functionally important N-cycling soil microorganisms across global grasslands

Mode of killing determines the necrotrophic response of oral bacteria

Protein puzzle : piecing together root-knot nematode effectors’ impact on plant parasitism through protein-protein interactions

Ecological impacts of offshore wind farms on flatfish with emphasis on plaice Pleuronectes platessa, a species of commercial interest in the southern North Sea

Exploring the added value of Whole Genome Sequencing in routine and pandemic viral surveillance

Cell-free DNA as a diagnostic and prognostic biomarker in pediatric rhabdomyosarcoma

Helicobacter pylori-derived outer membrane vesicles contribute to Alzheimer's disease pathogenesis via C3-C3aR signalling

Free complement and complement containing extracellular vesicles as potential biomarkers for neuroinflammatory and neurodegenerative disorders

In vivo inhibition of epileptiform afterdischarges in rat hippocampus by light-activated chloride channel, stGtACR2

Mesofauna as effective indicators of soil quality differences in the agricultural systems of central Cuba

Dendritic cell-biased precursors support early human thymopoiesis