Ghent University Academic Bibliography

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- Conference Paper
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The functional annotation and exploration the SOX11 enhanceosome

Amber Louwagie (UGent) , Bieke Decaesteker (UGent) , Louis Delhaye (UGent) , Eva D'haene (UGent) , Eric de Bony de Lavergne (UGent) , Volodimir Olexiouk (UGent) , Sarah Vergult (UGent) , Rogier Versteeg, Jan Koster, Johan van Nes, et al.

(2021) Advances in Neuroblastoma Research (ANR 2021), Abstracts.
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Lysins breaking down the walls of Gram-negative bacteria, no longer a no-go

Diana Gutierrez Fernandez (UGent) and Yves Briers (UGent)

(2021) Current opinion in biotechnology. April. p.15-22
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Effects of bioavailable phosphorus and soil biota on typical Nardus grassland species in competition with fast-growing plant species

Stephanie Schelfhout (UGent) , Safaa Wasof (UGent) , Jan Mertens (UGent) , Margot Vanhellemont, Andreas Demey (UGent) , Annelies Haegeman, Eva DeCock (UGent) , Iris Moeneclaey (UGent) , Pieter Vangansbeke (UGent) , Nicole Viaene (UGent) , et al.

(2021) ECOLOGICAL INDICATORS. 120.
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- Book Chapter
Engineering of yeast glycoprotein expression

Charlot De Wachter (UGent) , Linde Van Landuyt (UGent) and Nico Callewaert (UGent)

(2020) [Advances in Biochemical Engineering/Biotechnology]. In Advances in Biochemical Engineering/Biotechnology
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Anatomy and evolution of database search engines : a central component of mass spectrometry based proteomic workflows

Kenneth Verheggen (UGent) , Helge Raeder, Frode S Berven, Lennart Martens (UGent) , Harald Barsnes and Marc Vaudel

(2020) MASS SPECTROMETRY REVIEWS. 39(3). p.292-306
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Dredging-induced turbid plumes affect bio-irrigation and biogeochemistry in sediments inhabited by Lanice conchilega (Pallas, 1766)

Sebastiaan Mestdagh (UGent) , Tom Ysebaert, Tom Moens (UGent) and Carl Van Colen (UGent)

(2020) ICES JOURNAL OF MARINE SCIENCE. 77(3). p.1219-1226
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Phylogeny and sequence space : a combined approach to analyze the evolutionary trajectories of homologous proteins : the case study of aminodeoxychorismate synthase

Sylvain Lespinats, Olivier De Clerck (UGent) , Benoit Colange, Vera Gorelova (UGent) , Delphine Grando, Eric Marechal, Dominique Van Der Straeten (UGent) , Fabrice Rebeille and Olivier Bastien

(2020) ACTA BIOTHEORETICA. 68(1). p.139-156
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Regulation of nitrogen fixation from free-living organisms in soil and leaf litter of two tropical forests of the Guiana shield

Leandro Van Langenhove, Thomas Depaepe (UGent) , Sara Vicca, Joke van den Berge, Clement Stahl, Elodie Courtois, James Weedon, Ifigenia Urbina, Oriol Grau, Dolores Asensio, et al.

(2020) PLANT AND SOIL. 450(1-2). p.93-110
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PIRIN2 suppresses S‐type lignin accumulation in a noncell‐autonomous manner in Arabidopsis xylem elements

Bo Zhang, Bernadette Sztojka, Sacha Escamez, Ruben Vanholme (UGent) , Mattias Hedenström, Yin Wang, Halbay Turumtay (UGent) , András Gorzsás, Wout Boerjan (UGent) and Hannele Tuominen

(2020) NEW PHYTOLOGIST. 225(5). p.1923-1935
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The impact of the prostaglandin D₂ receptor 2 and its downstream effects on the pathophysiology of asthma

Christopher E Brightling, Guy Brusselle (UGent) and Pablo Altman

(2020) ALLERGY.
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SnRK2 protein kinases and mRNA decapping machinery control root development and response to salt

Dorota Kawa, A Jessica Meyer, Henk L Dekker, Ahmed Abd-El-Haliem, Kris Gevaert (UGent) , Eveline Van De Slijke (UGent) , Justyna Maszkowska, Maria Bucholc, Grazyna Dobrowolska, Geert De Jaeger (UGent) , et al.

(2020) PLANT PHYSIOLOGY. 182(1). p.361-377
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From lab to field : yield stability and shade avoidance genes are massively differentially expressed in the field

Hilde Nelissen (UGent) , Heike Sprenger (UGent) , Kirin Demuynck (UGent) , Jolien De Block (UGent) , Tom Van Hautegem (UGent) , Alex De Vliegher and Dirk Inzé (UGent)

(2020) PLANT BIOTECHNOLOGY JOURNAL. 18(5). p.1112-1114
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Non‐canonical AUX/IAA protein IAA33 competes with canonical AUX/IAA repressor IAA5 to negatively regulate auxin signaling

Bingsheng Lv, Qianqian Yu, Jiajia Liu, Xuejing Wen, Zhenwei Yan, Kongqin Hu, Hanbing Li, Xiangpei Kong, Cuiling Li, Huiyu Tian, et al.

(2020) EMBO JOURNAL. 39(1).
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Rice microtubule‐associated protein IQ67‐DOMAIN14 regulates rice grain shape by modulating microtubule cytoskeleton dynamics

Baojun Yang (UGent) , Jos Wendrich (UGent) , Bert De Rybel (UGent) , Dolf Weijers and Hong‐Wei Xue

(2020) PLANT BIOTECHNOLOGY JOURNAL. 18(5). p.1141-1152
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On the move : redox-dependent protein relocation in plants

Christine H Foyer, Alison Baker, Megan Wright, Imogen A Sparkes, Amna M'Hamdi (UGent) , Jos HM Schippers and Frank Van Breusegem (UGent)

(2020) JOURNAL OF EXPERIMENTAL BOTANY. 71(2). p.620-631
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Overexpression of an alternative allele of carboxyl/choline esterase 4 (CCE04) of Tetranychus urticae is associated with high levels of resistance to the keto‐enol acaricide spirodiclofen

Peng Wei (UGent) , Peter Demaeght (UGent) , Kristof De Schutter (UGent) , Linda Grigoraki, Vassiliki Labropoulou, Maria Riga, John Vontas, Ralf Nauen, Wannes Dermauw (UGent) and Thomas Van Leeuwen (UGent)

(2020) PEST MANAGEMENT SCIENCE. 76(3). p.1142-1153
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Antibacterial activity of a porous silver doped TiO2 coating on titanium substrates synthesized by plasma electrolytic oxidation

Monica Thukkaram (UGent) , Pieter Cools (UGent) , Anton Nikiforov (UGent) , Petra Rigole (UGent) , Tom Coenye (UGent) , Pascal Van Der Voort (UGent) , Gijs Du Laing (UGent) , Chris Vercruysse (UGent) , Heidi Declercq (UGent) , Rino Morent (UGent) , et al.

(2020) APPLIED SURFACE SCIENCE. 500.
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Forest fragmentation shapes the alpha‐gamma relationship in plant diversity

Ali Almoussawi, Jonathan Lenoir, Aurélien Jamoneau, Hattab Tarek, Safaa Wasof (UGent) , Emilie Gallet‐Moron, Carol Ximena Garzon‐Lopez, Fabien Spicher, Ahmad Kobaissi and Guillaume Decocq

(2020) JOURNAL OF VEGETATION SCIENCE.
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The H3 histone chaperone NASPSIM3 escorts CenH3 in Arabidopsis

Samuel Le Goff, Burcu Nur Keçeli (UGent) , Hana Jerabkova, Stefan Heckmann, Twan Rutten, Sylviane Cotterell, Veit Schubert, Elisabeth Roitinger, Karl Mechtler, F Christopher H Franklin, et al.

(2020) PLANT JOURNAL.
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Thermal sensitivity as a quality control attribute for biotherapeutics : the L‐asparaginase case

Han Yao (UGent) , Evelien Wynendaele (UGent) and Bart De Spiegeleer (UGent)

(2020) DRUG TESTING AND ANALYSIS. 12(1). p.67-77
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Synthesis and biological roles of O-glycans in insects

Weidong Li (UGent) , Kristof De Schutter (UGent) , Els Van Damme (UGent) and Guy Smagghe (UGent)

(2020) GLYCOCONJUGATE JOURNAL. 37(1). p.47-56
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Let's talk about sexes : sex-related N-glycosylation in ecologically important invertebrates

Freja Scheys (UGent) , Els Van Damme (UGent) and Guy Smagghe (UGent)

(2020) GLYCOCONJUGATE JOURNAL. 37(1). p.41-46
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Juglans regia (walnut) in temperate arable agroforestry systems : effects on soil characteristics, arthropod diversity and crop yield

Paul Pardon (UGent) , Jan Mertens (UGent) , Bert Reubens, Dirk Reheul (UGent) , Tom Coussement, Annemie Elsen, Victoria Nelissen and Kris Verheyen (UGent)

(2020) RENEWABLE AGRICULTURE AND FOOD SYSTEMS. 35(5). p.533-549
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Survey of slug-parasitic nematodes in East and West Flanders, Belgium and description of Angiostoma gandavensis n. sp. (Nematoda: Angiostomatidae) from arionid slugs

Phougeishangbam Rolish Singh (UGent) , Marjolein Couvreur (UGent) , Wilfrida Decraemer (UGent) and Wim Bert (UGent)

(2020) JOURNAL OF HELMINTHOLOGY. 94.
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Association of genomic domains in BRCA1 and BRCA2 with prostate cancer risk and aggressiveness

Vivek L. Patel, Evan L. Busch, Tara M. Friebel, Angel Cronin, Goska Leslie, Lesley McGuffog, Julian Adlard, Simona Agata, Bjarni A. Agnarsson, Munaza Ahmed, et al.

(2020) CANCER RESEARCH. 80(3). p.624-638
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Shift in size of bumblebee queens over the last century

Gérard Maxence, Baptiste Martinet, Kevin Maebe (UGent) , Leon Marshall, Guy Smagghe (UGent) , Nicolas J Vereecken, Sarah Vray, Pierre Rasmont and Denis Michez

(2020) GLOBAL CHANGE BIOLOGY.
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Functional characterization of novel MFSD8 pathogenic variants anticipates neurological involvement in juvenile isolated maculopathy

Miriam Bauwens (UGent) , Stephan Storch, Nicole Weisschuh, Chantal Ceuterick-de Groote, Riet De Rycke (UGent) , Brecht Guillemyn (UGent) , Sarah De Jaegere (UGent) , Frauke Coppieters (UGent) , Rudy Van Coster (UGent) , Bart Leroy (UGent) , et al.

(2020) CLINICAL GENETICS. 97(3). p.426-436
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TARP is an immunotherapeutic target in acute myeloid leukemia expressed in the leukemic stem cell compartment

Barbara Depreter (UGent) , Karin Weening (UGent) , Karl Vandepoele (UGent) , Magnus Essand, Barbara De Moerloose (UGent) , Maria Themeli, Jacqueline Cloos, Diana Hanekamp, Ine Moors (UGent) , Inge D'hont (UGent) , et al.

(2020) HAEMATOLOGICA. 105(5). p.1306-1316
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Achromobacter veterisilvae sp. nov., from a mixed hydrogen-oxidizing bacteria enrichment reactor for microbial protein production

Charles Dumolin (UGent) , Charlotte Peeters (UGent) , Elham Ehsani (UGent) , Guillaume Tahon (UGent) , Evelien De Canck (UGent) , Margo Cnockaert (UGent) , Nico Boon (UGent) and Peter Vandamme (UGent)

(2020) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 70. p.530-536
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Evaluating the potential of direct RNA nanopore sequencing : metatranscriptomics highlights possible seasonal differences in a marine pelagic crustacean zooplankton community

Ilias Semmouri (UGent) , Karel De Schamphelaere (UGent) , Jan Mees (UGent) , Colin Janssen (UGent) and Jana Asselman (UGent)

(2020) MARINE ENVIRONMENTAL RESEARCH. 153.
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Salmonella inactivation and cross-contamination on cherry and grape tomatoes under simulated wash conditions

Samantha Bolten, Ganyu Gu, Yaguang Luo, Sam Van Haute (UGent) , Bin Zhou, Pat Millner, Shirley A Micallef and Xiangwu Nou

(2020) FOOD MICROBIOLOGY. 87.
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Improved supervised learning-based approach for leaf and wood classification from LiDAR point clouds of forests

Sruthi Krishna Moorthy Parvathi (UGent) , Kim Calders (UGent) , Matheus B. Vicari and Hans Verbeeck (UGent)

(2020) IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING. 58(5). p.3057-3070
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Chitinozoan biostratigraphy of the Rheidol Gorge Section, Central Wales, UK : a GSSP replacement candidate for the Rhuddanian-Aeronian boundary

Julie De Weirdt (UGent) , Thijs Vandenbroucke (UGent) , Justine Cocq, Catherine Russell, Jeremy R Davies, Michael Melchin and Jan Zalasiewicz

(2020) PAPERS IN PALAEONTOLOGY.
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The white matter architecture underlying semantic processing : a systematic review

Elissa-Marie Cocquyt (UGent) , Ellen Lanckmans (UGent) , Pieter van Mierlo (UGent) , Wouter Duyck (UGent) , Arnaud Szmalec (UGent) , Patrick Santens (UGent) and Miet De Letter (UGent)

(2020) NEUROPSYCHOLOGIA. 136.
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A review of rare, poorly known, and morphologically problematic extant marine organic-walled dinoflagellate cyst taxa of the orders Gymnodiniales and Peridiniales from the Northern Hemisphere

Kenneth Neil Mertens, Haifeng Gu, Pieter Gurdebeke (UGent) , Yoshihito Takano, Dave Clarke, Hilal Aydin, Zhen Li, Vera Pospelova, Hyeon Ho Shin, Zhun Li, et al.

(2020) MARINE MICROPALEONTOLOGY. 159.
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Thiol-gelatin-norbornene bioink for laser‐based high‐definition bioprinting

Agnes Dobos, Jasper Van Hoorick (UGent) , Wolfgang Steiger, Peter Gruber, Marica Markovic, Orestis G Andriotis, Andreas Rohatschek, Peter Dubruel (UGent) , Philipp J Thurner, Sandra Van Vlierberghe (UGent) , et al.

(2020) ADVANCED HEALTHCARE MATERIALS.
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A clinical scoring system for congenital contractural arachnodactyly

Ilse Meerschaut (UGent) , Shana De Coninck, Wouter Steyaert (UGent) , Angela Barnicoat, Allan Bayat, Francesco Benedicenti, Siren Berland, Edward M. Blair, Jeroen Breckpot, Anna de Burca, et al.

(2020) GENETICS IN MEDICINE.
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Biological water quality in tropical rivers during dry and rainy seasons : a model-based analysis

Rubén Jerves Cobo (UGent) , Marie Anne Eurie Forio (UGent) , Koen Lock (UGent) , Jana Van Butsel (UGent) , Guillermina Pauta, Félipe Cisneros, Ingmar Nopens (UGent) and Peter Goethals (UGent)

(2020) ECOLOGICAL INDICATORS. 108.
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3D pore structure analysis of intact ‘Braeburn’ apples using X-ray micro-CT

Siem Janssen, Pieter Verboven, Bayu Nugraha, Zi Wang, Matthieu Boone (UGent) , Iván Josipovic (UGent) and Bart M Nicolaï

(2020) POSTHARVEST BIOLOGY AND TECHNOLOGY. 159.
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The plant WEE1 kinase is involved in checkpoint control activation in nematode-induced galls

Danila Cabral, Mohamed Youssef Banora, José Dijair Antonino, Natalia Rodiuc, Paulo Vieira, Roberta R Coelho, Christian Chevalier, Thomas Eekhout (UGent) , Gilbert Engler, Lieven De Veylder (UGent) , et al.

(2020) NEW PHYTOLOGIST. 225(1). p.430-447
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An intensity, image-based method to estimate gap fraction, canopy openness and effective leaf area index from phase-shift terrestrial laser scanning

Mirko Grotti, Kim Calders (UGent) , Niall Origo, Nicola Puletti, Alessandro Alivernini, Carlotta Ferrara and Francesco Chianucci

(2020) AGRICULTURAL AND FOREST METEOROLOGY. 280.
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Selenoprotein P and its potential role in Alzheimer's disease

Nikolay Solovyev (UGent)

(2020) HORMONES-INTERNATIONAL JOURNAL OF ENDOCRINOLOGY AND METABOLISM. 19(1). p.73-79
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Risk characterization and quantification of mycotoxins and their producing fungi in sugarcane juice : a neglected problem in a widely-consumed traditional beverage

Mohamed Fathi Abdallah Abdelmohsen (UGent) , Kris Audenaert (UGent) , Leonie Lust, Sofie Landschoot (UGent) , Boris Bekaert (UGent) , Geert Haesaert (UGent) , Marthe De Boevre (UGent) and Sarah De Saeger (UGent)

(2020) FOOD CONTROL. 108.
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Co-localization of microstructural damage and excessive mechanical strain at aortic branches in angiotensin-II-infused mice

Lydia Aslanidou, Mauro Ferraro, Goran Lovric, Matthew R. Bersi, Jay D. Humphrey, Patrick Segers (UGent) , Bram Trachet (UGent) and Nikos Stergiopulos

(2020) BIOMECHANICS AND MODELING IN MECHANOBIOLOGY. 19(1). p.81-97
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Inulin-fortification of a processed meat product attenuates formation of nitroso compounds in the gut of healthy rats

Rebekka Thøgersen, Nicola Gray, Gunter Kuhnle, Thomas Van Hecke (UGent) , Stefaan De Smet (UGent) , Jette Feveile Young, Ulrik Kræmer Sundekilde, Axel Kornerup Hansen and Hanne Christine Bertram

(2020) FOOD CHEMISTRY. 302.
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Comparative transcriptomics enables the identification of functional orthologous genes involved in early leaf growth

Jasmien Vercruysse (UGent) , Michiel Van Bel (UGent) , Cristina Osuna (UGent) , Shubhada Rajabhau Kulkarni (UGent) , Véronique Van den Storme, Hilde Nelissen (UGent) , Nathalie Gonzalez Sanchez (UGent) , Dirk Inzé (UGent) and Klaas Vandepoele (UGent)

(2020) PLANT BIOTECHNOLOGY JOURNAL. 18(2). p.553-567
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Scaffold free microtissue formation for enhanced cartilage repair

Lise De Moor (UGent) , Elien Beyls (UGent) and Heidi Declercq (UGent)

(2020) ANNALS OF BIOMEDICAL ENGINEERING.
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Phenology and growth of Fagus sylvatica and Quercus robur seedlings in response to temperature variation in the parental versus offspring generation

Sumitra Dewan (UGent) , Pieter De Frenne (UGent) , Olivier Leroux (UGent) , I. Nijs, K. Vander Mijnsbrugge and Kris Verheyen (UGent)

(2020) PLANT BIOLOGY. 22(S1). p.113-122
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Tools of the ethylene trade : a chemical kit to influence ethylene responses in plants and its use in agriculture

Thomas Depaepe (UGent) and Dominique Van Der Straeten (UGent)

(2020) SMALL METHODS.
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Taxonomic revision, phylogeny, and cyst wall composition of the dinoflagellate cyst genus Votadinium Reid (Dinophyceae, Peridiniales, Protoperidiniaceae)

Pieter Gurdebeke (UGent) , Kenneth N Mertens, Vera Pospelova, Kazumi Matsuoka, Zhen Li, Kristin E Gribble, Haifeng Gu, Kara Bogus, Henk Vrielinck (UGent) and Stephen Louwye (UGent)

(2020) PALYNOLOGY. 44(2). p.310-335
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Tiredness of life in older persons : a qualitative study on nurses’ experiences of being confronted with this growing phenomenon

Liesbeth Van Humbeeck (UGent) , Let Dillen (UGent) , Ruth Piers (UGent) and Nele Van Den Noortgate (UGent)

(2020) GERONTOLOGIST. 60(4). p.735-744
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Forest edges, tree diversity and tree identity change leaf miner diversity in a temperate forest

Irene van Schrojenstein Lantman (UGent) , Lionel Hertzog (UGent) , Martijn L. Vandegehuchte (UGent) , An Martel (UGent) , Kris Verheyen (UGent) , Luc Lens (UGent) and Dries Bonte (UGent)

(2020) INSECT CONSERVATION AND DIVERSITY. 13(1). p.10-22
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Brassinosteroids : multidimensional regulators of plant growth, development, and stress responses

Trevor Nolan, Nemanja Vukasinovic, Derui Liu (UGent) , Eugenia Russinova (UGent) and Yanhai Yin

(2020) PLANT CELL. 32(2). p.295-318
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RBR-type E3 ligases and the ubiquitin-conjugating enzyme UBC26 regulate abscisic acid receptor levels and signaling

Maria A Fernandez, Borja Belda-Palazon, Jose Julian, Alberto Coego, Jorge Lozano-Juste, Sabrina Iñigo (UGent) , Lesia Rodriguez, Eduardo Bueso, Alain Goossens (UGent) and Pedro L Rodriguez

(2020) PLANT PHYSIOLOGY. 182(4). p.1723-1742
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Charcot-Leyden crystals promote neutrophilic inflammation in patients with nasal polyposis

Elien Gevaert (UGent) , Tim Delemarre (UGent) , Joyceline De Volder (UGent) , Nan Zhang (UGent) , Gabriële Holtappels (UGent) , Natalie De Ruyck (UGent) , Emma Persson (UGent) , Ines Heyndrickx (UGent) , Kenneth Verstraete (UGent) , Helena Catharine Aegerter (UGent) , et al.

(2020) JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 145(1). p.427-430
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How grass keeps growing : an integrated analysis of hormonal crosstalk in the maize leaf growth zone

Dirk De Vos, Hilde Nelissen (UGent) , Hamada AbdElgawad, Els Prinsen, Jan Broeckhove, Dirk Inzé (UGent) and Gerrit TS Beemster

(2020) NEW PHYTOLOGIST. 225(6). p.2513-2525
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Effects of two types of calorie restriction on methylation levels of adiponectin receptor 1 (AdipoR1) and leptin receptor overlapping transcript (Leprot) in a MMTV-TGF-α breast cancer mouse model

Münevver Burcu Cicekdal (UGent) , BT Kazan, BG Tuna, U Ozorhan, ID Ekici, F Zhu, O Suakar, A Kuskucu, OF Bayrak, K Arcaro, et al.

(2020) BRITISH JOURNAL OF NUTRITION.
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Pollination efficiency and foraging behaviour of honey bees and non‐Apis bees to sweet cherry

Maxime Eeraerts (UGent) , Ruben Vanderhaegen (UGent) , Guy Smagghe (UGent) and Ivan Meeus (UGent)

(2020) AGRICULTURAL AND FOREST ENTOMOLOGY. 22(1). p.75-82
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Recommendations for standardized oral toxicity test protocols for larvae of solitary bees, Osmia spp.

Maxime Eeraerts (UGent) , Matti Pisman (UGent) , Ruben Vanderhaegen (UGent) , Ivan Meeus (UGent) and Guy Smagghe (UGent)

(2020) APIDOLOGIE.
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Habitat loss and fragmentation increase realized predator-prey body size ratios

Jasmijn Hillaert (UGent) , Martijn L. Vandegehuchte (UGent) , Thomas Hovestadt and Dries Bonte (UGent)

(2020) FUNCTIONAL ECOLOGY.
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Multivariate landscape analysis of honey bee winter mortality in Wallonia, Belgium

Leen Van Esch, Jean-Luc De Kok, Liliane Janssen, Bart Buelens, Lina De Smet (UGent) , Dirk de Graaf (UGent) and Guy Engelen

(2020) ENVIRONMENTAL MODELING & ASSESSMENT.
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Unveiling the nonlinear optical response of Trictenotoma childreni longhorn beetle

Sébastien R Mouchet, Charlotte Verstraete, Anna Kaczmarek (UGent) , Dimitrije Mara (UGent) , Stijn van Cleuvenbergen, Rik Van Deun (UGent) , Thierry Verbiest, Bjorn Maes, Pete Vukusic and Branko Kolaric

(2020) JOURNAL OF BIOPHOTONICS. 12(9).
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Interregional comparison of benthic ecosystem functioning : community bioturbation potential in four regions along the NE Atlantic shelf

Mayya Gogina, Michael L Zettler, Jan Vanaverbeke (UGent) , Jennifer Dannheim, Gert Van Hoey, Nicolas Desroy, Alexa Wrede, Henning Reiss, Steven Degraer (UGent) , Vera Van Lancker (UGent) , et al.

(2020) ECOLOGICAL INDICATORS. 110.
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Evaluation of attract-and-kill strategy for management of cocoa pod borer, Conopomorpha cramerella, in Malaysia cocoa plantation

Wouter Vanhove (UGent) , Yan Feng, Mengmeng Yu, Ikhram Osman Hafiz, Niels Vanhoudt, Patrick Van Damme (UGent) and Aijun Zhang

(2020) INTERNATIONAL JOURNAL OF PEST MANAGEMENT. 66(2). p.155-162
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Validation of an ultra-sensitive detection method for steroid esters in plasma for doping analysis using positive chemical ionization GC-MS/MS

Pieter Van Renterghem (UGent) , Wouter Viaene (UGent) , Wim Van Gansbeke (UGent) , Juliana Barrabin, Michele Iannone, Michaël Polet (UGent) , Guy T'Sjoen (UGent) , Koen Deventer (UGent) and Peter Van Eenoo (UGent)

(2020) JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES. 1141.
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Chlamydia : what is on the outside does matter

Arlieke Gitsels (UGent) , Sarah Van Lent (UGent) , Niek Sanders (UGent) and Daisy Vanrompay (UGent)

(2020) CRITICAL REVIEWS IN MICROBIOLOGY. 46(1). p.100-119
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RyR2 regulates Cx43 hemichannel intracellular Ca2+-dependent activation in cardiomyocytes

Alessio Lissoni (UGent) , Paco Hulpiau (UGent) , Tânia Martins-Marques, Nan Wang (UGent) , Geert Bultynck, Rainer Schulz, Katja Witschas (UGent) , Henrique Girao, Maarten De Smet (UGent) and Luc Leybaert (UGent)

(2020) CARDIOVASCULAR RESEARCH.
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- Journal Article
- A1
- open access
CytoNorm : a normalization algorithm for cytometry data

Sofie Van Gassen (UGent) , Brice Gaudilliere, Martin S Angst, Yvan Saeys (UGent) and Nima Aghaeepour

(2020) CYTOMETRY PART A.
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- Journal Article
- A1
Light availability and land-use history drive biodiversity and functional changes in forest herb layer communities

Leen Depauw (UGent) , Michael Perring (UGent) , Dries Landuyt (UGent) , Sybryn Maes (UGent) , Haben Blondeel (UGent) , Emiel De Lombaerde (UGent) , Guntis Brūmelis, Jörg Brunet, Déborah Closset-Kopp, Janusz Czerepko, et al.

(2020) JOURNAL OF ECOLOGY.
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- Miscellaneous
An extracellular microRNA can rescue lives in sepsis

Kelly Van Looveren (UGent) , Lise Van Wyngene (UGent) and Claude Libert (UGent)

(2020) EMBO REPORTS. 21(1).
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- Journal Article
- A1
MiR-189942 regulates fufenozide susceptibility by modulating ecdysone receptor isoform B in Plutella xylostella (L.)

Xiuxia Li, Xuexiang Ren, Ying Liu, Guy Smagghe (UGent) , Pei Liang and Xiwu Gao

(2020) PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY. 163. p.235-240
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- Journal Article
- A2
- open access
Assessment of bias in pan-tropical biomass predictions

Andrew Burt, Kim Calders (UGent) , Aida Cuni-Sanchez, Jose Gómez-Dans, Philip Lewis, Simon L Lewis, Yadvinder Malhi, Oliver L Phillips and Mathias Disney

(2020) FRONTIERS IN FORESTS AND GLOBAL CHANGE. 3.
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- PhD Thesis
Toxoplasma gondii infection kinetics and immune responses following infection and vaccination

Mizanur Rahman (UGent)

(2020)
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- Journal Article
- A1
Contrasting microclimates among hedgerows and woodlands across temperate Europe

Thomas Vanneste (UGent) , Sanne Govaert (UGent) , Fabien Spicher, Jörg Brunet, Sara A.O. Cousins, Guillaume Decocq, Martin Diekmann, Bente J. Graae, Per-Ola Hedwall, Rozália E. Kapás, et al.

(2020) AGRICULTURAL AND FOREST METEOROLOGY. 281.
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- Journal Article
- A1
- open access
Species–area relationships in continuous vegetation : evidence from Palaearctic grasslands

Jürgen Dengler, Thomas J. Matthews, Manuel J. Steinbauer, Sebastian Wolfrum, Steffen Boch, Alessandro Chiarucci, Timo Conradi, Iwona Dembicz, Corrado Marcenò, Itziar García‐Mijangos, et al.

(2020) JOURNAL OF BIOGEOGRAPHY. 47(1). p.72-86
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- Journal Article
- A1
Latitudinal variation in seed predation correlates with latitudinal variation in seed defensive and nutritional traits in a widespread oak species

Xoaquín Moreira, Luis Abdala-Roberts, Hans Henrik Bruun, Felisa Covelo, Pieter De Frenne (UGent) , Andrea Galmán, Álvaro Gaytán, Raimo Jaatinen, Pertti Pulkkinen, Jan P J G Ten Hoopen, et al.

(2020) ANNALS OF BOTANY. 125(6). p.881-890
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- A1
Plant functional trait response to environmental drivers across European temperate forest understorey communities

Sybryn Maes (UGent) , Michael Perring (UGent) , Leen Depauw (UGent) , M. Bernhardt‐Römermann, Haben Blondeel (UGent) , G. Brūmelis, J. Brunet, G. Decocq, J. den Ouden, S. Govaert, et al.

(2020) PLANT BIOLOGY. 22(3). p.410-424
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- Journal Article
- A1
Drivers of above‐ground understorey biomass and nutrient stocks in temperate deciduous forests

Dries Landuyt (UGent) , Sybryn Maes (UGent) , Leen Depauw (UGent) , Evy Ampoorter (UGent) , Haben Blondeel (UGent) , Michael Perring (UGent) , Guntis Brūmelis, Jörg Brunet, Guillaume Decocq, Jan den Ouden, et al.

(2020) JOURNAL OF ECOLOGY. 108(3). p.982-997
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The dynamic nature and regulation of the root clock

Wei Xuan (UGent) , Hugues De Gernier (UGent) and Tom Beeckman (UGent)

(2020) DEVELOPMENT. 147(3).
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Plant growth under suboptimal water conditions : early responses and methods to study them

Marieke Dubois (UGent) and Dirk Inzé (UGent)

(2020) JOURNAL OF EXPERIMENTAL BOTANY. 71(5). p.1706-1722
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- Journal Article
- A1
Phytohormones : multifunctional nutraceuticals against metabolic syndrome and comorbid diseases

Seowoo Kim (UGent) , Alain Goossens (UGent) , Claude Libert (UGent) , Filip Van Immerseel (UGent) , Jens Staal (UGent) and Rudi Beyaert (UGent)

(2020) BIOCHEMICAL PHARMACOLOGY. 175.
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- A1
- open access
Impact of different sampling schemes for decision making in soil-transmitted helminthiasis control programs

Luc E Coffeng, Veronica Malizia, Carolin Vegvari, Piet Cools (UGent) , Katherine E Halliday, Bruno Levecke (UGent) , Zeleke Mekonnen Kurmane, Paul M Gichuki, Somphou Sayasone, Rajiv Sarkar, et al.

(2020) JOURNAL OF INFECTIOUS DISEASES.
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- Book Chapter
Data processing for RNA/DNA sequencing

Inmaculada Fuertes, Maria Vila-Costa, Jana Asselman (UGent) , Benjamín Piña and Carlos Barata

(2020) Reference module in chemistry, molecular sciences and chemical engineering.
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A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

Mathieu Gand (UGent) , Wesley Mattheus, Nancy HC Roosens, Katelijne Dierick, Kathleen Marchal (UGent) , Sigrid CJ De Keersmaecker and Sophie Bertrand

(2020) FOOD MICROBIOLOGY. 87.
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- A1
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Pathway and network analysis of more than 2500 whole cancer genomes

Matthew A Reyna, David Haan, Marta Paczkowska, Lieven Verbeke (UGent) , Miguel Vazquez, Abdullah Kahraman, Sergio Pulido-Tamayo, Jonathan Barenboim, Lina Wadi, Priyanka Dhingra, et al.

(2020) NATURE COMMUNICATIONS. 11(1).
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Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah A Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj, Julian M Hess, Randi Istrup Juul, Ziao Lin, et al.

(2020) NATURE. 578(7793). p.102-111
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Integrative pathway enrichment analysis of multivariate omics data

Marta Paczkowska, Jonathan Barenboim, Nardnisa Sintupisut, Natalie S Fox, Helen Zhu, Diala Abd-Rabbo, Miles W Mee, Paul C Boutros, Jüri Reimand, the PCAWG Drivers and Functional Interpretation Working Group, et al.

(2020) NATURE COMMUNICATIONS. 11(1).
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Combined burden and functional impact tests for cancer driver discovery using DriverPower

Shimin Shuai, Steven Gallinger, Lincoln Stein, the PCAWG Drivers and Functional Interpretation Working Group, Kathleen Marchal (UGent) and Sergio Pulido-Tamayo

(2020) NATURE COMMUNICATIONS. 11(1).
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Dual and triple epithelial coculture model systems with donor-derived microbiota and THP-1 macrophages to mimic host-microbe interactions in the human sinonasal cavities

Charlotte De Rudder (UGent) , Marta Calatayud Arroyo (UGent) , Sarah Lebeer and Tom Van de Wiele (UGent)

(2020) MSPHERE. 5(1).
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Microbial succession during wheat bran fermentation and colonisation by human faecal microbiota as a result of niche diversification

Kim De Paepe (UGent) , Joran Verspreet, Christophe M. Courtin and Tom Van de Wiele (UGent)

(2020) ISME JOURNAL. 14(2). p.584-596
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Flow cytometry for rapid characterisation of microbial community dynamics in waste stabilisation ponds

Liah X Coggins, Irma Larma, Amy Hinchliffe, Ruben Props (UGent) and Anas Ghadouani

(2020) WATER RESEARCH. 169.
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Comment on HbA(1c) determination from HemaSpot blood collection devices : comparison of home-prepared dried blood spots with standard venous blood analysis

Nick Verougstraete (UGent) , Veronique Stove (UGent) and Christophe Stove (UGent)

(2020) DIABETIC MEDICINE.
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Simplified monomeric VHH-Fc antibodies provide new opportunities for passive immunization

Henri De Greve, Vikram Virdi (UGent) , Shruti Bakshi (UGent) and Anna Depicker (UGent)

(2020) CURRENT OPINION IN BIOTECHNOLOGY. 61. p.96-101
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Zulustylis (Abildgaardieae, Cyperaceae) : a new genus from sub-Saharan Africa

AM Muasya, Paul Goetghebeur (UGent) and Isabel Larridon (UGent)

(2020) SOUTH AFRICAN JOURNAL OF BOTANY. 128. p.326-332
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Investigation of age-related differences in toxicokinetic processes of deoxynivalenol and deoxynivalenol-3-glucoside in weaned piglets

Amelie Catteuw (UGent) , Mathias Devreese (UGent) , Siegrid De Baere (UGent) , Gunther Antonissen (UGent) , Lada Ivanova, Silvio Uhlig, Ann Martens (UGent) , Sarah De Saeger (UGent) , Marthe De Boevre (UGent) and Siska Croubels (UGent)

(2020) ARCHIVES OF TOXICOLOGY. 94(2). p.417-425
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Unraveling the ultrastructural details of αT‐catenin‐deficient cell‐cell contacts between heart muscle cells by the use of FIB‐SEM

Bieke Vanslembrouck (UGent) , Anna Kremer (UGent) , Frans Van Roy (UGent) , Saskia Lippens (UGent) and Jolanda van Hengel (UGent)

(2020) JOURNAL OF MICROSCOPY.
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Genomes of early-diverging streptophyte algae shed light on plant terrestrialization

Sibo Wang, Linzhou Li, Haoyuan Li, Sunil Kumar Sahu, Hongli Wang, Yan Xu, Wenfei Xian, Bo Song, Hongping Liang, Shifeng Cheng, et al.

(2020) NATURE PLANTS. 6(2). p.95-106
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Introgression of rol genes from rhizogenic Agrobacterium strains into Escallonia spp.

Hanne Denaeghel (UGent) , Siel Desmet (UGent) , Ellen De Keyser, Emmy Dhooghe, Tom Eeckhaut, Johan Van Huylenbroeck, Marie-Christine Van Labeke (UGent) and Katrijn Van Laere

(2020) PLANT CELL TISSUE AND ORGAN CULTURE. 140(2). p.403-414
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Bumble bee abundance and richness improves honey bee pollination behaviour in sweet cherry

Maxime Eeraerts (UGent) , Guy Smagghe (UGent) and Ivan Meeus (UGent)

(2020) BASIC AND APPLIED ECOLOGY. 43. p.27-33
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- Book Chapter
CRISPR-Cas-mediated gene knockout in tomato

Gwen Swinnen (UGent) , Thomas Jacobs (UGent) , Laurens Pauwels (UGent) and Alain Goossens (UGent)

(2020) Plant and food carotenoids : methods and protocols. In Methods in Molecular Biology 2083. p.321-341

The functional annotation and exploration the SOX11 enhanceosome

Lysins breaking down the walls of Gram-negative bacteria, no longer a no-go

Effects of bioavailable phosphorus and soil biota on typical Nardus grassland species in competition with fast-growing plant species

Engineering of yeast glycoprotein expression

Anatomy and evolution of database search engines : a central component of mass spectrometry based proteomic workflows

Dredging-induced turbid plumes affect bio-irrigation and biogeochemistry in sediments inhabited by Lanice conchilega (Pallas, 1766)

Phylogeny and sequence space : a combined approach to analyze the evolutionary trajectories of homologous proteins : the case study of aminodeoxychorismate synthase

Regulation of nitrogen fixation from free-living organisms in soil and leaf litter of two tropical forests of the Guiana shield

PIRIN2 suppresses S‐type lignin accumulation in a noncell‐autonomous manner in Arabidopsis xylem elements

The impact of the prostaglandin D₂ receptor 2 and its downstream effects on the pathophysiology of asthma

SnRK2 protein kinases and mRNA decapping machinery control root development and response to salt

From lab to field : yield stability and shade avoidance genes are massively differentially expressed in the field

Non‐canonical AUX/IAA protein IAA33 competes with canonical AUX/IAA repressor IAA5 to negatively regulate auxin signaling

Rice microtubule‐associated protein IQ67‐DOMAIN14 regulates rice grain shape by modulating microtubule cytoskeleton dynamics

On the move : redox-dependent protein relocation in plants

Overexpression of an alternative allele of carboxyl/choline esterase 4 (CCE04) of Tetranychus urticae is associated with high levels of resistance to the keto‐enol acaricide spirodiclofen

Antibacterial activity of a porous silver doped TiO2 coating on titanium substrates synthesized by plasma electrolytic oxidation

Forest fragmentation shapes the alpha‐gamma relationship in plant diversity

The H3 histone chaperone NASPSIM3 escorts CenH3 in Arabidopsis

Thermal sensitivity as a quality control attribute for biotherapeutics : the L‐asparaginase case

Synthesis and biological roles of O-glycans in insects

Let's talk about sexes : sex-related N-glycosylation in ecologically important invertebrates

Juglans regia (walnut) in temperate arable agroforestry systems : effects on soil characteristics, arthropod diversity and crop yield

Survey of slug-parasitic nematodes in East and West Flanders, Belgium and description of Angiostoma gandavensis n. sp. (Nematoda: Angiostomatidae) from arionid slugs

Association of genomic domains in BRCA1 and BRCA2 with prostate cancer risk and aggressiveness

Shift in size of bumblebee queens over the last century

Functional characterization of novel MFSD8 pathogenic variants anticipates neurological involvement in juvenile isolated maculopathy

TARP is an immunotherapeutic target in acute myeloid leukemia expressed in the leukemic stem cell compartment

Achromobacter veterisilvae sp. nov., from a mixed hydrogen-oxidizing bacteria enrichment reactor for microbial protein production

Evaluating the potential of direct RNA nanopore sequencing : metatranscriptomics highlights possible seasonal differences in a marine pelagic crustacean zooplankton community

Salmonella inactivation and cross-contamination on cherry and grape tomatoes under simulated wash conditions

Improved supervised learning-based approach for leaf and wood classification from LiDAR point clouds of forests

Chitinozoan biostratigraphy of the Rheidol Gorge Section, Central Wales, UK : a GSSP replacement candidate for the Rhuddanian-Aeronian boundary

The white matter architecture underlying semantic processing : a systematic review

A review of rare, poorly known, and morphologically problematic extant marine organic-walled dinoflagellate cyst taxa of the orders Gymnodiniales and Peridiniales from the Northern Hemisphere

Thiol-gelatin-norbornene bioink for laser‐based high‐definition bioprinting

A clinical scoring system for congenital contractural arachnodactyly

Biological water quality in tropical rivers during dry and rainy seasons : a model-based analysis

3D pore structure analysis of intact ‘Braeburn’ apples using X-ray micro-CT

The plant WEE1 kinase is involved in checkpoint control activation in nematode-induced galls

An intensity, image-based method to estimate gap fraction, canopy openness and effective leaf area index from phase-shift terrestrial laser scanning

Selenoprotein P and its potential role in Alzheimer's disease

Risk characterization and quantification of mycotoxins and their producing fungi in sugarcane juice : a neglected problem in a widely-consumed traditional beverage

Co-localization of microstructural damage and excessive mechanical strain at aortic branches in angiotensin-II-infused mice

Inulin-fortification of a processed meat product attenuates formation of nitroso compounds in the gut of healthy rats

Comparative transcriptomics enables the identification of functional orthologous genes involved in early leaf growth

Scaffold free microtissue formation for enhanced cartilage repair

Phenology and growth of Fagus sylvatica and Quercus robur seedlings in response to temperature variation in the parental versus offspring generation

Tools of the ethylene trade : a chemical kit to influence ethylene responses in plants and its use in agriculture

Taxonomic revision, phylogeny, and cyst wall composition of the dinoflagellate cyst genus Votadinium Reid (Dinophyceae, Peridiniales, Protoperidiniaceae)

Tiredness of life in older persons : a qualitative study on nurses’ experiences of being confronted with this growing phenomenon

Forest edges, tree diversity and tree identity change leaf miner diversity in a temperate forest

Brassinosteroids : multidimensional regulators of plant growth, development, and stress responses

RBR-type E3 ligases and the ubiquitin-conjugating enzyme UBC26 regulate abscisic acid receptor levels and signaling

Charcot-Leyden crystals promote neutrophilic inflammation in patients with nasal polyposis

How grass keeps growing : an integrated analysis of hormonal crosstalk in the maize leaf growth zone

Effects of two types of calorie restriction on methylation levels of adiponectin receptor 1 (AdipoR1) and leptin receptor overlapping transcript (Leprot) in a MMTV-TGF-α breast cancer mouse model

Pollination efficiency and foraging behaviour of honey bees and non‐Apis bees to sweet cherry

Recommendations for standardized oral toxicity test protocols for larvae of solitary bees, Osmia spp.

Habitat loss and fragmentation increase realized predator-prey body size ratios

Multivariate landscape analysis of honey bee winter mortality in Wallonia, Belgium

Unveiling the nonlinear optical response of Trictenotoma childreni longhorn beetle

Interregional comparison of benthic ecosystem functioning : community bioturbation potential in four regions along the NE Atlantic shelf

Evaluation of attract-and-kill strategy for management of cocoa pod borer, Conopomorpha cramerella, in Malaysia cocoa plantation

Validation of an ultra-sensitive detection method for steroid esters in plasma for doping analysis using positive chemical ionization GC-MS/MS

Chlamydia : what is on the outside does matter

RyR2 regulates Cx43 hemichannel intracellular Ca2+-dependent activation in cardiomyocytes

CytoNorm : a normalization algorithm for cytometry data

Light availability and land-use history drive biodiversity and functional changes in forest herb layer communities

An extracellular microRNA can rescue lives in sepsis

MiR-189942 regulates fufenozide susceptibility by modulating ecdysone receptor isoform B in Plutella xylostella (L.)

Assessment of bias in pan-tropical biomass predictions

Toxoplasma gondii infection kinetics and immune responses following infection and vaccination

Contrasting microclimates among hedgerows and woodlands across temperate Europe

Species–area relationships in continuous vegetation : evidence from Palaearctic grasslands

Latitudinal variation in seed predation correlates with latitudinal variation in seed defensive and nutritional traits in a widespread oak species

Plant functional trait response to environmental drivers across European temperate forest understorey communities

Drivers of above‐ground understorey biomass and nutrient stocks in temperate deciduous forests

The dynamic nature and regulation of the root clock

Plant growth under suboptimal water conditions : early responses and methods to study them